RNA–Protein interactions for RNA: ENST00000591880.2

GFAP-220, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 1,103 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-220ENST00000591880 ZNF804AQ7Z570 1209 aa13.9□□□□□ -0.18
GFAP-220ENST00000591880 JMYQ8N9B5 988 aa13.9□□□□□ -0.18
GFAP-220ENST00000591880 TRPM4Q8TD43 1214 aa13.9□□□□□ -0.18
GFAP-220ENST00000591880 KAZALD1Q96I82 304 aa13.9□□□□□ -0.18
GFAP-220ENST00000591880 USP44Q9H0E7 712 aa13.9□□□□□ -0.18
GFAP-220ENST00000591880 SCN9AQ15858 1988 aa13.9□□□□□ -0.18
GFAP-220ENST00000591880 CNTNAP1P78357 1384 aa13.89□□□□□ -0.19
GFAP-220ENST00000591880 CDC37L1Q7L3B6 337 aa13.89□□□□□ -0.19
GFAP-220ENST00000591880 USP17L8P0C7I0 530 aa13.88□□□□□ -0.19
GFAP-220ENST00000591880 ZNF280AP59817 542 aaPredicted RBP13.88□□□□□ -0.19
GFAP-220ENST00000591880 UBE4AQ14139 1066 aa13.88□□□□□ -0.19
GFAP-220ENST00000591880 OGFOD1Q8N543 542 aa13.88□□□□□ -0.19
GFAP-220ENST00000591880 ANKRD44Q8N8A2 993 aa13.88□□□□□ -0.19
GFAP-220ENST00000591880 FBXW7Q969H0 707 aa13.88□□□□□ -0.19
GFAP-220ENST00000591880 ZNF594Q96JF6 807 aaPredicted RBP13.88□□□□□ -0.19
GFAP-220ENST00000591880 CD209Q9NNX6 404 aa13.88□□□□□ -0.19
GFAP-220ENST00000591880 KCNQ5Q9NR82 932 aa13.88□□□□□ -0.19
GFAP-220ENST00000591880 TAF5LO75529 589 aa13.87□□□□□ -0.19
GFAP-220ENST00000591880 GNAI3P08754 354 aa13.87□□□□□ -0.19
GFAP-220ENST00000591880 HIRAP54198 1017 aaPredicted RBP13.87□□□□□ -0.19
GFAP-220ENST00000591880 TBC1D10BQ4KMP7 808 aaPredicted RBP13.87□□□□□ -0.19
GFAP-220ENST00000591880 DACT2Q5SW24 774 aa13.87□□□□□ -0.19
GFAP-220ENST00000591880 SAMD7Q7Z3H4 446 aa13.87□□□□□ -0.19
GFAP-220ENST00000591880 DCPSQ96C86 337 aaKnown RBP13.87□□□□□ -0.19
GFAP-220ENST00000591880 FBXO3Q9UK99 471 aa13.87□□□□□ -0.19
GFAP-220ENST00000591880 HDAC9Q9UKV0 1011 aa13.87□□□□□ -0.19
GFAP-220ENST00000591880 IRS2Q9Y4H2 1338 aa13.87□□□□□ -0.19
GFAP-220ENST00000591880 RASSF10A6NK89 507 aa13.86□□□□□ -0.19
GFAP-220ENST00000591880 KLRK1P26718 216 aa13.86□□□□□ -0.19
GFAP-220ENST00000591880 FKBP1AP62942 108 aaKnown RBP13.86□□□□□ -0.19
GFAP-220ENST00000591880 METTL24Q5JXM2 366 aa13.86□□□□□ -0.19
GFAP-220ENST00000591880 INTS3Q68E01 1043 aaKnown RBP13.86□□□□□ -0.19
GFAP-220ENST00000591880 TTLL5Q6EMB2 1281 aa13.86□□□□□ -0.19
GFAP-220ENST00000591880 ATF7IPQ6VMQ6 1270 aa13.86□□□□□ -0.19
GFAP-220ENST00000591880 TXNRD3Q86VQ6 643 aa13.86□□□□□ -0.19
GFAP-220ENST00000591880 GMLQ99445 158 aa13.86□□□□□ -0.19
GFAP-220ENST00000591880 MYOZ2Q9NPC6 264 aa13.86□□□□□ -0.19
GFAP-220ENST00000591880 ABT1Q9ULW3 272 aaKnown RBP13.86□□□□□ -0.19
GFAP-220ENST00000591880 TRPM7Q96QT4 1865 aa13.86□□□□□ -0.19
GFAP-220ENST00000591880 PITPNM2Q9BZ72 1349 aa13.86□□□□□ -0.19
GFAP-220ENST00000591880 SHTN1A0MZ66 631 aa13.85□□□□□ -0.19
GFAP-220ENST00000591880 IL1R1P14778 569 aa13.85□□□□□ -0.19
GFAP-220ENST00000591880 SULF1Q8IWU6 871 aa13.85□□□□□ -0.19
GFAP-220ENST00000591880 HELBQ8NG08 1087 aaPredicted RBP13.85□□□□□ -0.19
GFAP-220ENST00000591880 GGA3Q9NZ52 723 aa13.85□□□□□ -0.19
GFAP-220ENST00000591880 MKRN1Q9UHC7 482 aaKnown RBP13.85□□□□□ -0.19
GFAP-220ENST00000591880 RIPOR2Q9Y4F9 1068 aa13.85□□□□□ -0.19
GFAP-220ENST00000591880 ZNF646O15015 1829 aaPredicted RBP13.85□□□□□ -0.19
GFAP-220ENST00000591880 WTIPA6NIX2 430 aaPredicted RBP13.84□□□□□ -0.19
GFAP-220ENST00000591880 PLIN1O60240 522 aa13.84□□□□□ -0.19
GFAP-220ENST00000591880 TRIM27P14373 513 aa13.84□□□□□ -0.19
GFAP-220ENST00000591880 ECE1P42892 770 aa13.84□□□□□ -0.19
GFAP-220ENST00000591880 GTF2IP78347 998 aa13.84□□□□□ -0.19
GFAP-220ENST00000591880 DEFB115Q30KQ5 88 aa13.84□□□□□ -0.19
GFAP-220ENST00000591880 RBM26Q5T8P6 1007 aaKnown RBP13.84□□□□□ -0.19
GFAP-220ENST00000591880 ZKSCAN2Q63HK3 967 aa13.84□□□□□ -0.19
GFAP-220ENST00000591880 KRT26Q7Z3Y9 468 aa13.84□□□□□ -0.19
GFAP-220ENST00000591880 FRAT1Q92837 279 aaPredicted RBP13.84□□□□□ -0.19
GFAP-220ENST00000591880 GLIS2Q9BZE0 524 aaPredicted RBP13.84□□□□□ -0.19
GFAP-220ENST00000591880 EYA2O00167 538 aa13.83□□□□□ -0.2
GFAP-220ENST00000591880 TRAF5O00463 557 aa13.83□□□□□ -0.2
GFAP-220ENST00000591880 PDE8BO95263 885 aa13.83□□□□□ -0.2
GFAP-220ENST00000591880 CELF2O95319 508 aaKnown RBP13.83□□□□□ -0.2
GFAP-220ENST00000591880 CAVIN4Q5BKX8 364 aa13.83□□□□□ -0.2
GFAP-220ENST00000591880 VPS37DQ86XT2 251 aa13.83□□□□□ -0.2
GFAP-220ENST00000591880 HHIPL1Q96JK4 782 aa13.83□□□□□ -0.2
GFAP-220ENST00000591880 PUS3Q9BZE2 481 aaKnown RBP13.83□□□□□ -0.2
GFAP-220ENST00000591880 TLL2Q9Y6L7 1015 aa13.83□□□□□ -0.2
GFAP-220ENST00000591880 SNAP23O00161 211 aa13.82□□□□□ -0.2
GFAP-220ENST00000591880 BCAR3O75815 825 aa13.82□□□□□ -0.2
GFAP-220ENST00000591880 CIAO1O76071 339 aa13.82□□□□□ -0.2
GFAP-220ENST00000591880 EGFRP00533 1210 aa13.82□□□□□ -0.2
GFAP-220ENST00000591880 IFIT1P09914 478 aaKnown RBP13.82□□□□□ -0.2
GFAP-220ENST00000591880 HIBADHP31937 336 aaKnown RBP13.82□□□□□ -0.2
GFAP-220ENST00000591880 RFX5P48382 616 aaPredicted RBP13.82□□□□□ -0.2
GFAP-220ENST00000591880 PUM3Q15397 648 aaKnown RBP13.82□□□□□ -0.2
GFAP-220ENST00000591880 LRRC24Q50LG9 513 aa13.82□□□□□ -0.2
GFAP-220ENST00000591880 FTSJ3Q8IY81 847 aaKnown RBP13.82□□□□□ -0.2
GFAP-220ENST00000591880 MEIS3Q99687 375 aa13.82□□□□□ -0.2
GFAP-220ENST00000591880 LRRFIP2Q9Y608 721 aaKnown RBP13.82□□□□□ -0.2
GFAP-220ENST00000591880 ARAP2Q8WZ64 1704 aa13.81□□□□□ -0.2
GFAP-220ENST00000591880 COL1A1P02452 1464 aaPredicted RBP13.81□□□□□ -0.2
GFAP-220ENST00000591880 SASH1O94885 1247 aa13.81□□□□□ -0.2
GFAP-220ENST00000591880 PTPN12Q05209 780 aaKnown RBP13.81□□□□□ -0.2
GFAP-220ENST00000591880 SCARF1Q14162 830 aa13.81□□□□□ -0.2
GFAP-220ENST00000591880 ANGEL2Q5VTE6 544 aaKnown RBP13.81□□□□□ -0.2
GFAP-220ENST00000591880 CST9Q5W186 159 aa13.81□□□□□ -0.2
GFAP-220ENST00000591880 VGLL2Q8N8G2 317 aa13.81□□□□□ -0.2
GFAP-220ENST00000591880 ZNF408Q9H9D4 720 aa13.81□□□□□ -0.2
GFAP-220ENST00000591880 THSD7BQ9C0I4 1608 aa13.81□□□□□ -0.2
GFAP-220ENST00000591880 FAM205AQ6ZU69 1335 aa13.81□□□□□ -0.2
GFAP-220ENST00000591880 SLC5A1P13866 664 aa13.8□□□□□ -0.2
GFAP-220ENST00000591880 IL15P40933 162 aaPredicted RBP13.8□□□□□ -0.2
GFAP-220ENST00000591880 MTX1Q13505 466 aa13.8□□□□□ -0.2
GFAP-220ENST00000591880 USP48Q86UV5 1035 aa13.8□□□□□ -0.2
GFAP-220ENST00000591880 KIAA0825Q8IV33 1275 aa13.8□□□□□ -0.2
GFAP-220ENST00000591880 TDRD7Q8NHU6 1098 aaKnown RBP13.8□□□□□ -0.2
GFAP-220ENST00000591880 KLHDC4Q8TBB5 520 aa13.8□□□□□ -0.2
GFAP-220ENST00000591880 TBC1D22AQ8WUA7 517 aa13.8□□□□□ -0.2
GFAP-220ENST00000591880 LPIN2Q92539 896 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms