RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 RPS12P25398 132 aaKnown RBP12.56□□□□□ -0.4
BRCA1-227ENST00000591849 SCNN1DP51172 638 aa12.56□□□□□ -0.4
BRCA1-227ENST00000591849 RBM26Q5T8P6 1007 aaKnown RBP12.56□□□□□ -0.4
BRCA1-227ENST00000591849 MICALL2Q8IY33 904 aa12.56□□□□□ -0.4
BRCA1-227ENST00000591849 KLHDC4Q8TBB5 520 aa12.56□□□□□ -0.4
BRCA1-227ENST00000591849 RCAN3Q9UKA8 241 aa12.56□□□□□ -0.4
BRCA1-227ENST00000591849 COL4A5P29400 1685 aa12.56□□□□□ -0.4
BRCA1-227ENST00000591849 COL4A1P02462 1669 aa12.55□□□□□ -0.4
BRCA1-227ENST00000591849 SNAP23O00161 211 aa12.55□□□□□ -0.4
BRCA1-227ENST00000591849 VIL1P09327 827 aaKnown RBP12.55□□□□□ -0.4
BRCA1-227ENST00000591849 POTEIP0CG38 1075 aa12.55□□□□□ -0.4
BRCA1-227ENST00000591849 POTEJP0CG39 1038 aa12.55□□□□□ -0.4
BRCA1-227ENST00000591849 UBE4AQ14139 1066 aa12.55□□□□□ -0.4
BRCA1-227ENST00000591849 LRRC24Q50LG9 513 aa12.55□□□□□ -0.4
BRCA1-227ENST00000591849 VPS37DQ86XT2 251 aa12.55□□□□□ -0.4
BRCA1-227ENST00000591849 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.55□□□□□ -0.4
BRCA1-227ENST00000591849 DPF2Q92785 391 aa12.55□□□□□ -0.4
BRCA1-227ENST00000591849 RIPOR2Q9Y4F9 1068 aa12.55□□□□□ -0.4
BRCA1-227ENST00000591849 EYA2O00167 538 aa12.54□□□□□ -0.4
BRCA1-227ENST00000591849 FRAT2O75474 233 aaPredicted RBP12.54□□□□□ -0.4
BRCA1-227ENST00000591849 IFIT1P09914 478 aaKnown RBP12.54□□□□□ -0.4
BRCA1-227ENST00000591849 HTRA3P83110 453 aa12.54□□□□□ -0.4
BRCA1-227ENST00000591849 TTLL5Q6EMB2 1281 aa12.54□□□□□ -0.4
BRCA1-227ENST00000591849 RSBN1LQ6PCB5 846 aaPredicted RBP12.54□□□□□ -0.4
BRCA1-227ENST00000591849 TXNRD3Q86VQ6 643 aa12.54□□□□□ -0.4
BRCA1-227ENST00000591849 CNTROBQ8N137 903 aa12.54□□□□□ -0.4
BRCA1-227ENST00000591849 AGBL3Q8NEM8 1001 aa12.54□□□□□ -0.4
BRCA1-227ENST00000591849 SIL1Q9H173 461 aa12.54□□□□□ -0.4
BRCA1-227ENST00000591849 CD209Q9NNX6 404 aa12.54□□□□□ -0.4
BRCA1-227ENST00000591849 CEP126Q9P2H0 1117 aa12.54□□□□□ -0.4
BRCA1-227ENST00000591849 DUOX1Q9NRD9 1551 aa12.53□□□□□ -0.4
BRCA1-227ENST00000591849 SRGAP3O43295 1099 aa12.53□□□□□ -0.4
BRCA1-227ENST00000591849 KLRK1P26718 216 aa12.53□□□□□ -0.4
BRCA1-227ENST00000591849 HIBADHP31937 336 aaKnown RBP12.53□□□□□ -0.4
BRCA1-227ENST00000591849 GTF2IP78347 998 aa12.53□□□□□ -0.4
BRCA1-227ENST00000591849 TBC1D10BQ4KMP7 808 aaPredicted RBP12.53□□□□□ -0.4
BRCA1-227ENST00000591849 CAVIN4Q5BKX8 364 aa12.53□□□□□ -0.4
BRCA1-227ENST00000591849 STRIP1Q5VSL9 837 aa12.53□□□□□ -0.4
BRCA1-227ENST00000591849 MAP1SQ66K74 1059 aaPredicted RBP12.53□□□□□ -0.4
BRCA1-227ENST00000591849 C15orf52Q6ZUT6 534 aaKnown RBP12.53□□□□□ -0.4
BRCA1-227ENST00000591849 OGFOD1Q8N543 542 aa12.53□□□□□ -0.4
BRCA1-227ENST00000591849 LRRC37AA6NMS7 1700 aa12.53□□□□□ -0.4
BRCA1-227ENST00000591849 MYH3P11055 1940 aa12.52□□□□□ -0.4
BRCA1-227ENST00000591849 PDE8BO95263 885 aa12.52□□□□□ -0.41
BRCA1-227ENST00000591849 USP17L8P0C7I0 530 aa12.52□□□□□ -0.41
BRCA1-227ENST00000591849 SLC5A1P13866 664 aa12.52□□□□□ -0.41
BRCA1-227ENST00000591849 PTPN12Q05209 780 aaKnown RBP12.52□□□□□ -0.41
BRCA1-227ENST00000591849 SAMD7Q7Z3H4 446 aa12.52□□□□□ -0.41
BRCA1-227ENST00000591849 PANK1Q8TE04 598 aa12.52□□□□□ -0.41
BRCA1-227ENST00000591849 FBXO3Q9UK99 471 aa12.52□□□□□ -0.41
BRCA1-227ENST00000591849 SHTN1A0MZ66 631 aa12.51□□□□□ -0.41
BRCA1-227ENST00000591849 CIAO1O76071 339 aa12.51□□□□□ -0.41
BRCA1-227ENST00000591849 IL15P40933 162 aaPredicted RBP12.51□□□□□ -0.41
BRCA1-227ENST00000591849 GYG1P46976 350 aa12.51□□□□□ -0.41
BRCA1-227ENST00000591849 RFX5P48382 616 aaPredicted RBP12.51□□□□□ -0.41
BRCA1-227ENST00000591849 PUM3Q15397 648 aaKnown RBP12.51□□□□□ -0.41
BRCA1-227ENST00000591849 TRPM4Q8TD43 1214 aa12.51□□□□□ -0.41
BRCA1-227ENST00000591849 DCPSQ96C86 337 aaKnown RBP12.51□□□□□ -0.41
BRCA1-227ENST00000591849 HDAC9Q9UKV0 1011 aa12.51□□□□□ -0.41
BRCA1-227ENST00000591849 PA2G4Q9UQ80 394 aaKnown RBP12.51□□□□□ -0.41
BRCA1-227ENST00000591849 MYO3BQ8WXR4 1341 aa12.51□□□□□ -0.41
BRCA1-227ENST00000591849 ADAMTSL1Q8N6G6 1762 aa12.51□□□□□ -0.41
BRCA1-227ENST00000591849 RLBP1P12271 317 aa12.5□□□□□ -0.41
BRCA1-227ENST00000591849 G3BP1Q13283 466 aaKnown RBP eCLIP12.5□□□□□ -0.41
BRCA1-227ENST00000591849 OS9Q13438 667 aaPredicted RBP12.5□□□□□ -0.41
BRCA1-227ENST00000591849 KIF4BQ2VIQ3 1234 aa12.5□□□□□ -0.41
BRCA1-227ENST00000591849 DACT2Q5SW24 774 aa12.5□□□□□ -0.41
BRCA1-227ENST00000591849 ZC3H15Q8WU90 426 aaKnown RBP12.5□□□□□ -0.41
BRCA1-227ENST00000591849 MXD3Q9BW11 206 aa12.5□□□□□ -0.41
BRCA1-227ENST00000591849 CHMP4BQ9H444 224 aaKnown RBP12.5□□□□□ -0.41
BRCA1-227ENST00000591849 IL1R1P14778 569 aa12.49□□□□□ -0.41
BRCA1-227ENST00000591849 CHAF1AQ13111 956 aaPredicted RBP12.49□□□□□ -0.41
BRCA1-227ENST00000591849 KIAA0825Q8IV33 1275 aa12.49□□□□□ -0.41
BRCA1-227ENST00000591849 LPIN2Q92539 896 aa12.49□□□□□ -0.41
BRCA1-227ENST00000591849 FAM84BQ96KN1 310 aaPredicted RBP12.49□□□□□ -0.41
BRCA1-227ENST00000591849 C1orf115Q9H7X2 142 aa12.49□□□□□ -0.41
BRCA1-227ENST00000591849 COPRSQ9NQ92 184 aa12.49□□□□□ -0.41
BRCA1-227ENST00000591849 JAG2Q9Y219 1238 aa12.49□□□□□ -0.41
BRCA1-227ENST00000591849 F8W031 263 aaPredicted RBP12.48□□□□□ -0.41
BRCA1-227ENST00000591849 ZBTB7BO15156 539 aaPredicted RBP12.48□□□□□ -0.41
BRCA1-227ENST00000591849 SASH1O94885 1247 aa12.48□□□□□ -0.41
BRCA1-227ENST00000591849 BCAMP50895 628 aa12.48□□□□□ -0.41
BRCA1-227ENST00000591849 HIRAP54198 1017 aaPredicted RBP12.48□□□□□ -0.41
BRCA1-227ENST00000591849 ATP8B2P98198 1209 aa12.48□□□□□ -0.41
BRCA1-227ENST00000591849 MTX1Q13505 466 aa12.48□□□□□ -0.41
BRCA1-227ENST00000591849 ATP2B3Q16720 1220 aa12.48□□□□□ -0.41
BRCA1-227ENST00000591849 CDC37L1Q7L3B6 337 aa12.48□□□□□ -0.41
BRCA1-227ENST00000591849 ATG9AQ7Z3C6 839 aa12.48□□□□□ -0.41
BRCA1-227ENST00000591849 MYOZ2Q9NPC6 264 aa12.48□□□□□ -0.41
BRCA1-227ENST00000591849 GNL3LQ9NVN8 582 aaKnown RBP12.48□□□□□ -0.41
BRCA1-227ENST00000591849 IQSEC3Q9UPP2 1182 aaPredicted RBP12.48□□□□□ -0.41
BRCA1-227ENST00000591849 AKAP2Q9Y2D5 859 aa12.48□□□□□ -0.41
BRCA1-227ENST00000591849 COG6Q9Y2V7 657 aa12.48□□□□□ -0.41
BRCA1-227ENST00000591849 SPEF2Q9C093 1822 aa12.47□□□□□ -0.41
BRCA1-227ENST00000591849 TMEM88BA6NKF7 163 aa12.47□□□□□ -0.41
BRCA1-227ENST00000591849 ITGBL1O95965 494 aaPredicted RBP12.47□□□□□ -0.41
BRCA1-227ENST00000591849 MMP14P50281 582 aa12.47□□□□□ -0.41
BRCA1-227ENST00000591849 RBM5P52756 815 aaKnown RBP eCLIP12.47□□□□□ -0.41
BRCA1-227ENST00000591849 ZNF280AP59817 542 aaPredicted RBP12.47□□□□□ -0.41
BRCA1-227ENST00000591849 SCARF1Q14162 830 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms