RNA–Protein interactions for RNA: ENST00000591782.1

VMP1-212, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 729 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-212ENST00000591782 A0A1W2PP55 124 aa6.07□□□□□ -1.44
VMP1-212ENST00000591782 ERCC3P19447 782 aa6.07□□□□□ -1.44
VMP1-212ENST00000591782 PODNQ7Z5L7 613 aa6.07□□□□□ -1.44
VMP1-212ENST00000591782 TRIM11Q96F44 468 aa6.07□□□□□ -1.44
VMP1-212ENST00000591782 POP1Q99575 1024 aaKnown RBP6.07□□□□□ -1.44
VMP1-212ENST00000591782 PDE2AO00408 941 aaPredicted RBP6.06□□□□□ -1.44
VMP1-212ENST00000591782 GNB5O14775 395 aa6.06□□□□□ -1.44
VMP1-212ENST00000591782 LDHBP07195 334 aaKnown RBP6.06□□□□□ -1.44
VMP1-212ENST00000591782 ATP2B2Q01814 1243 aa6.06□□□□□ -1.44
VMP1-212ENST00000591782 COL19A1Q14993 1142 aa6.06□□□□□ -1.44
VMP1-212ENST00000591782 EAPPQ56P03 285 aaPredicted RBP6.06□□□□□ -1.44
VMP1-212ENST00000591782 KIAA0319Q5VV43 1072 aa6.06□□□□□ -1.44
VMP1-212ENST00000591782 MSL1Q68DK7 614 aa6.06□□□□□ -1.44
VMP1-212ENST00000591782 BEND7Q8N7W2 519 aaPredicted RBP6.06□□□□□ -1.44
VMP1-212ENST00000591782 TMEM102Q8N9M5 508 aaPredicted RBP6.06□□□□□ -1.44
VMP1-212ENST00000591782 SCARF2Q96GP6 870 aaPredicted RBP6.06□□□□□ -1.44
VMP1-212ENST00000591782 LACRTQ9GZZ8 138 aa6.06□□□□□ -1.44
VMP1-212ENST00000591782 GADD45BO75293 160 aaPredicted RBP6.05□□□□□ -1.44
VMP1-212ENST00000591782 BAG6P46379 1132 aa6.05□□□□□ -1.44
VMP1-212ENST00000591782 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.05□□□□□ -1.44
VMP1-212ENST00000591782 ALG1LQ6GMV1 187 aa6.05□□□□□ -1.44
VMP1-212ENST00000591782 FBXO33Q7Z6M2 555 aa6.05□□□□□ -1.44
VMP1-212ENST00000591782 IL22RA1Q8N6P7 574 aa6.05□□□□□ -1.44
VMP1-212ENST00000591782 NXPE3Q969Y0 559 aa6.05□□□□□ -1.44
VMP1-212ENST00000591782 PLVAPQ9BX97 442 aa6.05□□□□□ -1.44
VMP1-212ENST00000591782 EHD4Q9H223 541 aa6.05□□□□□ -1.44
VMP1-212ENST00000591782 SUV39H2Q9H5I1 410 aa6.05□□□□□ -1.44
VMP1-212ENST00000591782 LIN7BQ9HAP6 207 aa6.05□□□□□ -1.44
VMP1-212ENST00000591782 NLRP2Q9NX02 1062 aa6.05□□□□□ -1.44
VMP1-212ENST00000591782 PODXL2Q9NZ53 605 aa6.05□□□□□ -1.44
VMP1-212ENST00000591782 METTL12A8MUP2 240 aa6.04□□□□□ -1.44
VMP1-212ENST00000591782 PTPRAP18433 802 aa6.04□□□□□ -1.44
VMP1-212ENST00000591782 TAGLNQ01995 201 aaKnown RBP6.04□□□□□ -1.44
VMP1-212ENST00000591782 GRM2Q14416 872 aa6.04□□□□□ -1.44
VMP1-212ENST00000591782 WFDC8Q8IUA0 241 aa6.04□□□□□ -1.44
VMP1-212ENST00000591782 CCNJLQ8IV13 435 aa6.04□□□□□ -1.44
VMP1-212ENST00000591782 DMRTC2Q8IXT2 367 aaPredicted RBP6.04□□□□□ -1.44
VMP1-212ENST00000591782 ASAP3Q8TDY4 903 aa6.04□□□□□ -1.44
VMP1-212ENST00000591782 FBF1Q8TES7 1133 aa6.04□□□□□ -1.44
VMP1-212ENST00000591782 TCF12Q99081 682 aa6.04□□□□□ -1.44
VMP1-212ENST00000591782 BHLHE41Q9C0J9 482 aaPredicted RBP6.04□□□□□ -1.44
VMP1-212ENST00000591782 SH2B1Q9NRF2 756 aaPredicted RBP6.04□□□□□ -1.44
VMP1-212ENST00000591782 PIK3R2O00459 728 aa6.03□□□□□ -1.44
VMP1-212ENST00000591782 GRIA4P48058 902 aa6.03□□□□□ -1.44
VMP1-212ENST00000591782 TRAPPC3LQ5T215 181 aa6.03□□□□□ -1.44
VMP1-212ENST00000591782 ILDR2Q71H61 639 aa6.03□□□□□ -1.44
VMP1-212ENST00000591782 CACTIN-AS1Q8N1I8 211 aa6.03□□□□□ -1.44
VMP1-212ENST00000591782 ADAM19Q9H013 955 aa6.03□□□□□ -1.44
VMP1-212ENST00000591782 RNF19AQ9NV58 838 aa6.03□□□□□ -1.44
VMP1-212ENST00000591782 FAM229AH3BQW9 127 aa6.02□□□□□ -1.45
VMP1-212ENST00000591782 PRPF40AO75400 957 aaKnown RBP6.02□□□□□ -1.45
VMP1-212ENST00000591782 EPHA1P21709 976 aa6.02□□□□□ -1.45
VMP1-212ENST00000591782 COL8A1P27658 744 aa6.02□□□□□ -1.45
VMP1-212ENST00000591782 CDC27P30260 824 aa6.02□□□□□ -1.45
VMP1-212ENST00000591782 CDC25BP30305 580 aa6.02□□□□□ -1.45
VMP1-212ENST00000591782 SPRED3Q2MJR0 410 aa6.02□□□□□ -1.45
VMP1-212ENST00000591782 TXNDC11Q6PKC3 985 aa6.02□□□□□ -1.45
VMP1-212ENST00000591782 NXPE4Q6UWF7 544 aa6.02□□□□□ -1.45
VMP1-212ENST00000591782 GLIS3Q8NEA6 775 aa6.02□□□□□ -1.45
VMP1-212ENST00000591782 BSNDQ8WZ55 320 aa6.02□□□□□ -1.45
VMP1-212ENST00000591782 DUSP9Q99956 384 aaKnown RBP6.02□□□□□ -1.45
VMP1-212ENST00000591782 BCL2L13Q9BXK5 485 aa6.02□□□□□ -1.45
VMP1-212ENST00000591782 BCO2Q9BYV7 579 aa6.02□□□□□ -1.45
VMP1-212ENST00000591782 SOX13Q9UN79 622 aa6.02□□□□□ -1.45
VMP1-212ENST00000591782 CCDC9Q9Y3X0 531 aaKnown RBP6.02□□□□□ -1.45
VMP1-212ENST00000591782 PPME1Q9Y570 386 aa6.02□□□□□ -1.45
VMP1-212ENST00000591782 A0A096LPE4 126 aa6.01□□□□□ -1.45
VMP1-212ENST00000591782 A0A0A0MRY4 1105 aa6.01□□□□□ -1.45
VMP1-212ENST00000591782 A0A1W2PPZ6 126 aa6.01□□□□□ -1.45
VMP1-212ENST00000591782 FAM177BA6PVY3 158 aa6.01□□□□□ -1.45
VMP1-212ENST00000591782 LINC01387J3KSC0 135 aa6.01□□□□□ -1.45
VMP1-212ENST00000591782 RNF225M0QZC1 329 aaPredicted RBP6.01□□□□□ -1.45
VMP1-212ENST00000591782 PRPF40BQ6NWY9 871 aaKnown RBP6.01□□□□□ -1.45
VMP1-212ENST00000591782 OSBPL7Q9BZF2 842 aa6.01□□□□□ -1.45
VMP1-212ENST00000591782 MUC3BQ9H195 1237 aa6.01□□□□□ -1.45
VMP1-212ENST00000591782 ABCB6Q9NP58 842 aa6.01□□□□□ -1.45
VMP1-212ENST00000591782 NOP53Q9NZM5 478 aaKnown RBP6.01□□□□□ -1.45
VMP1-212ENST00000591782 TRAK1Q9UPV9 953 aa6.01□□□□□ -1.45
VMP1-212ENST00000591782 SPDYE3A6NKU9 549 aa6□□□□□ -1.45
VMP1-212ENST00000591782 FCGRTP55899 365 aa6□□□□□ -1.45
VMP1-212ENST00000591782 FGD1P98174 961 aa6□□□□□ -1.45
VMP1-212ENST00000591782 VN1R5Q7Z5H4 357 aa6□□□□□ -1.45
VMP1-212ENST00000591782 RGS22Q8NE09 1264 aa6□□□□□ -1.45
VMP1-212ENST00000591782 GIPC2Q8TF65 315 aa6□□□□□ -1.45
VMP1-212ENST00000591782 SPG7Q9UQ90 795 aa6□□□□□ -1.45
VMP1-212ENST00000591782 TMEM238LA0A1B0GVL6 79 aa5.99□□□□□ -1.45
VMP1-212ENST00000591782 H3BRJ5 948 aa5.99□□□□□ -1.45
VMP1-212ENST00000591782 DEAF1O75398 565 aaPredicted RBP5.99□□□□□ -1.45
VMP1-212ENST00000591782 GNA15P30679 374 aa5.99□□□□□ -1.45
VMP1-212ENST00000591782 CABP4P57796 275 aa5.99□□□□□ -1.45
VMP1-212ENST00000591782 TRIM28Q13263 835 aaKnown RBP5.99□□□□□ -1.45
VMP1-212ENST00000591782 SETDB1Q15047 1291 aa5.99□□□□□ -1.45
VMP1-212ENST00000591782 FMR1NBQ8N0W7 255 aaPredicted RBP5.99□□□□□ -1.45
VMP1-212ENST00000591782 FOXD4L4Q8WXT5 416 aaPredicted RBP5.99□□□□□ -1.45
VMP1-212ENST00000591782 FAM161BQ96MY7 647 aa5.99□□□□□ -1.45
VMP1-212ENST00000591782 CARD10Q9BWT7 1032 aa5.99□□□□□ -1.45
VMP1-212ENST00000591782 C12orf49Q9H741 205 aa5.99□□□□□ -1.45
VMP1-212ENST00000591782 PARP2Q9UGN5 583 aa5.99□□□□□ -1.45
VMP1-212ENST00000591782 ITPKAP23677 461 aa5.98□□□□□ -1.45
VMP1-212ENST00000591782 GSK3AP49840 483 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms