RNA–Protein interactions for RNA: ENST00000591316.1

CROCCP3-205, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 5

Gene CROCCP3, Length 1,563 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-205ENST00000591316 A0A1B0GUL7 405 aa22.61■■□□□ 1.21
CROCCP3-205ENST00000591316 IFIT1P09914 478 aaKnown RBP22.61■■□□□ 1.21
CROCCP3-205ENST00000591316 SLC5A1P13866 664 aa22.61■■□□□ 1.21
CROCCP3-205ENST00000591316 FGFR2P21802 821 aa22.61■■□□□ 1.21
CROCCP3-205ENST00000591316 IARSP41252 1262 aaKnown RBP22.61■■□□□ 1.21
CROCCP3-205ENST00000591316 DOK7Q18PE1 504 aa22.61■■□□□ 1.21
CROCCP3-205ENST00000591316 LARGE2Q8N3Y3 721 aa22.61■■□□□ 1.21
CROCCP3-205ENST00000591316 CCDC8Q9H0W5 538 aaPredicted RBP22.61■■□□□ 1.21
CROCCP3-205ENST00000591316 TNNI3KQ59H18 835 aa22.6■■□□□ 1.21
CROCCP3-205ENST00000591316 ZBTB47Q9UFB7 747 aaPredicted RBP22.6■■□□□ 1.21
CROCCP3-205ENST00000591316 FPGT-TNNI3KV9GXZ4 949 aa22.6■■□□□ 1.21
CROCCP3-205ENST00000591316 LRRC37AA6NMS7 1700 aa22.6■■□□□ 1.21
CROCCP3-205ENST00000591316 GYG1P46976 350 aa22.59■■□□□ 1.21
CROCCP3-205ENST00000591316 CLASRPQ8N2M8 674 aaKnown RBP22.59■■□□□ 1.21
CROCCP3-205ENST00000591316 EAF2Q96CJ1 260 aaPredicted RBP22.59■■□□□ 1.21
CROCCP3-205ENST00000591316 PPP4R2Q9NY27 417 aa22.59■■□□□ 1.21
CROCCP3-205ENST00000591316 LMNB1P20700 586 aa22.59■■□□□ 1.21
CROCCP3-205ENST00000591316 ADORA1P30542 326 aa22.59■■□□□ 1.21
CROCCP3-205ENST00000591316 KIAA2012Q0VF49 1180 aa22.59■■□□□ 1.21
CROCCP3-205ENST00000591316 AACSQ86V21 672 aa22.59■■□□□ 1.21
CROCCP3-205ENST00000591316 LTBP3Q9NS15 1303 aa22.58■■□□□ 1.21
CROCCP3-205ENST00000591316 VPS37DQ86XT2 251 aa22.58■■□□□ 1.2
CROCCP3-205ENST00000591316 SMC5Q8IY18 1101 aa22.58■■□□□ 1.2
CROCCP3-205ENST00000591316 XAGE2Q96GT9 111 aa22.58■■□□□ 1.2
CROCCP3-205ENST00000591316 DBNDD1Q9H9R9 158 aa22.58■■□□□ 1.2
CROCCP3-205ENST00000591316 BCAMP50895 628 aa22.57■■□□□ 1.2
CROCCP3-205ENST00000591316 CAVIN4Q5BKX8 364 aa22.57■■□□□ 1.2
CROCCP3-205ENST00000591316 GORABQ5T7V8 394 aa22.57■■□□□ 1.2
CROCCP3-205ENST00000591316 FAM84BQ96KN1 310 aaPredicted RBP22.57■■□□□ 1.2
CROCCP3-205ENST00000591316 GPR108Q9NPR9 543 aa22.57■■□□□ 1.2
CROCCP3-205ENST00000591316 RNF181Q9P0P0 153 aa22.57■■□□□ 1.2
CROCCP3-205ENST00000591316 FER1L6Q2WGJ9 1857 aa22.56■■□□□ 1.2
CROCCP3-205ENST00000591316 DUOX1Q9NRD9 1551 aa22.56■■□□□ 1.2
CROCCP3-205ENST00000591316 HIBADHP31937 336 aaKnown RBP22.56■■□□□ 1.2
CROCCP3-205ENST00000591316 C9orf131Q5VYM1 1079 aa22.56■■□□□ 1.2
CROCCP3-205ENST00000591316 C16orf71Q8IYS4 520 aaPredicted RBP22.56■■□□□ 1.2
CROCCP3-205ENST00000591316 JDP2Q8WYK2 163 aa22.56■■□□□ 1.2
CROCCP3-205ENST00000591316 VPS33BQ9H267 617 aa22.56■■□□□ 1.2
CROCCP3-205ENST00000591316 IFIT2P09913 472 aaKnown RBP22.55■■□□□ 1.2
CROCCP3-205ENST00000591316 DBNDD2Q9BQY9 259 aa22.55■■□□□ 1.2
CROCCP3-205ENST00000591316 TLR7Q9NYK1 1049 aaKnown RBP22.55■■□□□ 1.2
CROCCP3-205ENST00000591316 MED23Q9ULK4 1368 aa22.55■■□□□ 1.2
CROCCP3-205ENST00000591316 C15orf52Q6ZUT6 534 aaKnown RBP22.55■■□□□ 1.2
CROCCP3-205ENST00000591316 NIM1KQ8IY84 436 aa22.55■■□□□ 1.2
CROCCP3-205ENST00000591316 IQSEC3Q9UPP2 1182 aaPredicted RBP22.55■■□□□ 1.2
CROCCP3-205ENST00000591316 IRS2Q9Y4H2 1338 aa22.54■■□□□ 1.2
CROCCP3-205ENST00000591316 ZNF804AQ7Z570 1209 aa22.54■■□□□ 1.2
CROCCP3-205ENST00000591316 LNPKQ9C0E8 428 aa22.54■■□□□ 1.2
CROCCP3-205ENST00000591316 ECE2O60344 883 aa22.53■■□□□ 1.2
CROCCP3-205ENST00000591316 FRAT2O75474 233 aaPredicted RBP22.53■■□□□ 1.2
CROCCP3-205ENST00000591316 FBXO33Q7Z6M2 555 aa22.53■■□□□ 1.2
CROCCP3-205ENST00000591316 COA1Q9GZY4 146 aa22.53■■□□□ 1.2
CROCCP3-205ENST00000591316 CD209Q9NNX6 404 aa22.53■■□□□ 1.2
CROCCP3-205ENST00000591316 KCNQ5Q9NR82 932 aa22.53■■□□□ 1.2
CROCCP3-205ENST00000591316 DBNLQ9UJU6 430 aaKnown RBP22.53■■□□□ 1.2
CROCCP3-205ENST00000591316 LTBP1Q14766 1721 aa22.53■■□□□ 1.2
CROCCP3-205ENST00000591316 PHKA1P46020 1223 aa22.52■■□□□ 1.2
CROCCP3-205ENST00000591316 CCDC102BQ68D86 513 aa22.52■■□□□ 1.2
CROCCP3-205ENST00000591316 NUCB1Q02818 461 aa22.51■■□□□ 1.19
CROCCP3-205ENST00000591316 CCDC158Q5M9N0 1113 aa22.51■■□□□ 1.19
CROCCP3-205ENST00000591316 CENPQQ7L2Z9 268 aaPredicted RBP22.51■■□□□ 1.19
CROCCP3-205ENST00000591316 CHD1LQ86WJ1 897 aa22.51■■□□□ 1.19
CROCCP3-205ENST00000591316 GTF3C3Q9Y5Q9 886 aa22.51■■□□□ 1.19
CROCCP3-205ENST00000591316 ZNF609O15014 1411 aa22.51■■□□□ 1.19
CROCCP3-205ENST00000591316 FBXW7Q969H0 707 aa22.5■■□□□ 1.19
CROCCP3-205ENST00000591316 ZNRF3Q9ULT6 936 aa22.5■■□□□ 1.19
CROCCP3-205ENST00000591316 A0A1B0GUL6 1792 aa22.5■■□□□ 1.19
CROCCP3-205ENST00000591316 KDM2BQ8NHM5 1336 aa22.5■■□□□ 1.19
CROCCP3-205ENST00000591316 YDJCA8MPS7 323 aa22.5■■□□□ 1.19
CROCCP3-205ENST00000591316 TTC39AQ5SRH9 613 aa22.5■■□□□ 1.19
CROCCP3-205ENST00000591316 PODNQ7Z5L7 613 aa22.5■■□□□ 1.19
CROCCP3-205ENST00000591316 JAG2Q9Y219 1238 aa22.5■■□□□ 1.19
CROCCP3-205ENST00000591316 RAD17O75943 681 aa22.49■■□□□ 1.19
CROCCP3-205ENST00000591316 OTUD7AQ8TE49 926 aaPredicted RBP22.49■■□□□ 1.19
CROCCP3-205ENST00000591316 GNL3LQ9NVN8 582 aaKnown RBP22.49■■□□□ 1.19
CROCCP3-205ENST00000591316 TDRD7Q8NHU6 1098 aaKnown RBP22.48■■□□□ 1.19
CROCCP3-205ENST00000591316 COL4A5P29400 1685 aa22.47■■□□□ 1.19
CROCCP3-205ENST00000591316 IL1R1P14778 569 aa22.47■■□□□ 1.19
CROCCP3-205ENST00000591316 EIF6P56537 245 aaKnown RBP22.47■■□□□ 1.19
CROCCP3-205ENST00000591316 GTF2IP78347 998 aa22.47■■□□□ 1.19
CROCCP3-205ENST00000591316 CHAF1AQ13111 956 aaPredicted RBP22.47■■□□□ 1.19
CROCCP3-205ENST00000591316 CCDC88AQ3V6T2 1871 aa22.47■■□□□ 1.19
CROCCP3-205ENST00000591316 FZD9O00144 591 aa22.46■■□□□ 1.19
CROCCP3-205ENST00000591316 TTLL5Q6EMB2 1281 aa22.46■■□□□ 1.19
CROCCP3-205ENST00000591316 CXCL9Q07325 125 aa22.46■■□□□ 1.19
CROCCP3-205ENST00000591316 TSHZ3Q63HK5 1081 aa22.46■■□□□ 1.19
CROCCP3-205ENST00000591316 SBF1O95248 1867 aa22.45■■□□□ 1.18
CROCCP3-205ENST00000591316 SNRKQ9NRH2 765 aa22.45■■□□□ 1.18
CROCCP3-205ENST00000591316 GJA3Q9Y6H8 435 aa22.45■■□□□ 1.18
CROCCP3-205ENST00000591316 UQCRFS1P1P0C7P4 283 aa22.44■■□□□ 1.18
CROCCP3-205ENST00000591316 SCARF1Q14162 830 aa22.44■■□□□ 1.18
CROCCP3-205ENST00000591316 CIAPIN1Q6FI81 312 aa22.44■■□□□ 1.18
CROCCP3-205ENST00000591316 MXD3Q9BW11 206 aa22.44■■□□□ 1.18
CROCCP3-205ENST00000591316 USP17L3A6NCW0 530 aa22.43■■□□□ 1.18
CROCCP3-205ENST00000591316 USP17L4A6NCW7 530 aa22.43■■□□□ 1.18
CROCCP3-205ENST00000591316 PSMD14O00487 310 aa22.43■■□□□ 1.18
CROCCP3-205ENST00000591316 PI16Q6UXB8 463 aa22.43■■□□□ 1.18
CROCCP3-205ENST00000591316 USP17L1Q7RTZ2 530 aa22.43■■□□□ 1.18
CROCCP3-205ENST00000591316 BOLA2Q9H3K6 86 aa22.43■■□□□ 1.18
CROCCP3-205ENST00000591316 DENND2AQ9ULE3 1009 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms