RNA–Protein interactions for RNA: ENST00000590248.1

NEDD4L-228, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4L, Length 730 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-228ENST00000590248 PTPRCP08575 1304 aa17.37■□□□□ 0.37
NEDD4L-228ENST00000590248 PLIN1O60240 522 aa17.36■□□□□ 0.37
NEDD4L-228ENST00000590248 KCNJ4P48050 445 aa17.36■□□□□ 0.37
NEDD4L-228ENST00000590248 DEFB115Q30KQ5 88 aa17.36■□□□□ 0.37
NEDD4L-228ENST00000590248 ALDH1L2Q3SY69 923 aa17.36■□□□□ 0.37
NEDD4L-228ENST00000590248 TAF7LQ5H9L4 462 aa17.36■□□□□ 0.37
NEDD4L-228ENST00000590248 ZC3H15Q8WU90 426 aaKnown RBP17.36■□□□□ 0.37
NEDD4L-228ENST00000590248 ZNF408Q9H9D4 720 aa17.36■□□□□ 0.37
NEDD4L-228ENST00000590248 ASTN2O75129 1339 aaPredicted RBP17.36■□□□□ 0.37
NEDD4L-228ENST00000590248 USP17L3A6NCW0 530 aa17.35■□□□□ 0.37
NEDD4L-228ENST00000590248 USP17L4A6NCW7 530 aa17.35■□□□□ 0.37
NEDD4L-228ENST00000590248 HSPA1AP0DMV8 641 aaKnown RBP17.35■□□□□ 0.37
NEDD4L-228ENST00000590248 HSPA1BP0DMV9 641 aaKnown RBP17.35■□□□□ 0.37
NEDD4L-228ENST00000590248 LDHAL6AQ6ZMR3 332 aa17.35■□□□□ 0.37
NEDD4L-228ENST00000590248 USP17L1Q7RTZ2 530 aa17.35■□□□□ 0.37
NEDD4L-228ENST00000590248 CNNM1Q9NRU3 951 aa17.35■□□□□ 0.37
NEDD4L-228ENST00000590248 NOB1Q9ULX3 412 aaKnown RBP17.35■□□□□ 0.37
NEDD4L-228ENST00000590248 UTYO14607 1347 aa17.34■□□□□ 0.37
NEDD4L-228ENST00000590248 CELF2O95319 508 aaKnown RBP17.34■□□□□ 0.37
NEDD4L-228ENST00000590248 KIF4BQ2VIQ3 1234 aa17.34■□□□□ 0.37
NEDD4L-228ENST00000590248 CDC37L1Q7L3B6 337 aa17.34■□□□□ 0.37
NEDD4L-228ENST00000590248 AGBL3Q8NEM8 1001 aa17.34■□□□□ 0.37
NEDD4L-228ENST00000590248 GMLQ99445 158 aa17.34■□□□□ 0.37
NEDD4L-228ENST00000590248 PUS3Q9BZE2 481 aaKnown RBP17.34■□□□□ 0.37
NEDD4L-228ENST00000590248 COA1Q9GZY4 146 aa17.34■□□□□ 0.37
NEDD4L-228ENST00000590248 BICC1Q9H694 974 aaKnown RBP17.34■□□□□ 0.37
NEDD4L-228ENST00000590248 RASSF10A6NK89 507 aa17.33■□□□□ 0.36
NEDD4L-228ENST00000590248 GRM1Q13255 1194 aa17.33■□□□□ 0.36
NEDD4L-228ENST00000590248 DACT2Q5SW24 774 aa17.33■□□□□ 0.36
NEDD4L-228ENST00000590248 USP44Q9H0E7 712 aa17.33■□□□□ 0.36
NEDD4L-228ENST00000590248 SCAF8Q9UPN6 1271 aaKnown RBP17.33■□□□□ 0.36
NEDD4L-228ENST00000590248 ADM5C9JUS6 153 aa17.32■□□□□ 0.36
NEDD4L-228ENST00000590248 USP17L8P0C7I0 530 aa17.32■□□□□ 0.36
NEDD4L-228ENST00000590248 ZNF280AP59817 542 aaPredicted RBP17.32■□□□□ 0.36
NEDD4L-228ENST00000590248 GTF2IP78347 998 aa17.32■□□□□ 0.36
NEDD4L-228ENST00000590248 TTLL5Q6EMB2 1281 aa17.32■□□□□ 0.36
NEDD4L-228ENST00000590248 PAXIP1Q6ZW49 1069 aaPredicted RBP17.32■□□□□ 0.36
NEDD4L-228ENST00000590248 CD209Q9NNX6 404 aa17.32■□□□□ 0.36
NEDD4L-228ENST00000590248 IRS2Q9Y4H2 1338 aa17.31■□□□□ 0.36
NEDD4L-228ENST00000590248 SCARF1Q14162 830 aa17.31■□□□□ 0.36
NEDD4L-228ENST00000590248 CYP4F22Q6NT55 531 aa17.31■□□□□ 0.36
NEDD4L-228ENST00000590248 KRT26Q7Z3Y9 468 aa17.31■□□□□ 0.36
NEDD4L-228ENST00000590248 ANKRD44Q8N8A2 993 aa17.31■□□□□ 0.36
NEDD4L-228ENST00000590248 KLHDC4Q8TBB5 520 aa17.31■□□□□ 0.36
NEDD4L-228ENST00000590248 DCPSQ96C86 337 aaKnown RBP17.31■□□□□ 0.36
NEDD4L-228ENST00000590248 MYOZ2Q9NPC6 264 aa17.31■□□□□ 0.36
NEDD4L-228ENST00000590248 WDR33Q9C0J8 1336 aaKnown RBP17.3■□□□□ 0.36
NEDD4L-228ENST00000590248 RABL6Q3YEC7 729 aaPredicted RBP17.3■□□□□ 0.36
NEDD4L-228ENST00000590248 COL13A1Q5TAT6 717 aaPredicted RBP17.3■□□□□ 0.36
NEDD4L-228ENST00000590248 STRIP1Q5VSL9 837 aa17.3■□□□□ 0.36
NEDD4L-228ENST00000590248 GGA3Q9NZ52 723 aa17.3■□□□□ 0.36
NEDD4L-228ENST00000590248 TLL2Q9Y6L7 1015 aa17.3■□□□□ 0.36
NEDD4L-228ENST00000590248 CT47B1P0C2W7 299 aaPredicted RBP17.29■□□□□ 0.36
NEDD4L-228ENST00000590248 RARSP54136 660 aaKnown RBP17.29■□□□□ 0.36
NEDD4L-228ENST00000590248 LRRC24Q50LG9 513 aa17.29■□□□□ 0.36
NEDD4L-228ENST00000590248 ANGEL2Q5VTE6 544 aaKnown RBP17.29■□□□□ 0.36
NEDD4L-228ENST00000590248 SAPCD2Q86UD0 394 aa17.29■□□□□ 0.36
NEDD4L-228ENST00000590248 JAG2Q9Y219 1238 aa17.29■□□□□ 0.36
NEDD4L-228ENST00000590248 HNRNPUQ00839 825 aaKnown RBP eCLIP17.28■□□□□ 0.36
NEDD4L-228ENST00000590248 NBPF9Q3BBW0 867 aa17.28■□□□□ 0.36
NEDD4L-228ENST00000590248 KIAA0825Q8IV33 1275 aa17.28■□□□□ 0.36
NEDD4L-228ENST00000590248 CAPNS2Q96L46 248 aa17.28■□□□□ 0.36
NEDD4L-228ENST00000590248 RIPOR2Q9Y4F9 1068 aa17.28■□□□□ 0.36
NEDD4L-228ENST00000590248 ZNF609O15014 1411 aa17.28■□□□□ 0.36
NEDD4L-228ENST00000590248 C15orf52Q6ZUT6 534 aaKnown RBP17.27■□□□□ 0.36
NEDD4L-228ENST00000590248 FOXN1O15353 648 aa17.26■□□□□ 0.35
NEDD4L-228ENST00000590248 GYG1P46976 350 aa17.26■□□□□ 0.35
NEDD4L-228ENST00000590248 SULF1Q8IWU6 871 aa17.26■□□□□ 0.35
NEDD4L-228ENST00000590248 OGFOD1Q8N543 542 aa17.26■□□□□ 0.35
NEDD4L-228ENST00000590248 CERS5Q8N5B7 392 aa17.26■□□□□ 0.35
NEDD4L-228ENST00000590248 MYO3BQ8WXR4 1341 aa17.25■□□□□ 0.35
NEDD4L-228ENST00000590248 F8W031 263 aaPredicted RBP17.25■□□□□ 0.35
NEDD4L-228ENST00000590248 AOC2O75106 756 aa17.25■□□□□ 0.35
NEDD4L-228ENST00000590248 BCAR3O75815 825 aa17.25■□□□□ 0.35
NEDD4L-228ENST00000590248 SASH1O94885 1247 aa17.25■□□□□ 0.35
NEDD4L-228ENST00000590248 IL1R1P14778 569 aa17.25■□□□□ 0.35
NEDD4L-228ENST00000590248 BRPF1P55201 1214 aaPredicted RBP17.25■□□□□ 0.35
NEDD4L-228ENST00000590248 PRAMEF18Q5VWM3 479 aa17.25■□□□□ 0.35
NEDD4L-228ENST00000590248 ZNF804AQ7Z570 1209 aa17.25■□□□□ 0.35
NEDD4L-228ENST00000590248 API5Q9BZZ5 524 aaKnown RBP17.25■□□□□ 0.35
NEDD4L-228ENST00000590248 TNNQ9UQP3 1299 aa17.25■□□□□ 0.35
NEDD4L-228ENST00000590248 WNT10BO00744 389 aa17.24■□□□□ 0.35
NEDD4L-228ENST00000590248 UBE4AQ14139 1066 aa17.24■□□□□ 0.35
NEDD4L-228ENST00000590248 METTL24Q5JXM2 366 aa17.24■□□□□ 0.35
NEDD4L-228ENST00000590248 CDCA5Q96FF9 252 aa17.24■□□□□ 0.35
NEDD4L-228ENST00000590248 FAM84BQ96KN1 310 aaPredicted RBP17.24■□□□□ 0.35
NEDD4L-228ENST00000590248 WBP1LQ9NX94 342 aa17.24■□□□□ 0.35
NEDD4L-228ENST00000590248 PCDHAC2Q9Y5I4 1007 aa17.24■□□□□ 0.35
NEDD4L-228ENST00000590248 MROH5Q6ZUA9 1318 aa17.23■□□□□ 0.35
NEDD4L-228ENST00000590248 UBTFL1P0CB47 393 aaPredicted RBP17.23■□□□□ 0.35
NEDD4L-228ENST00000590248 ECE1P42892 770 aa17.23■□□□□ 0.35
NEDD4L-228ENST00000590248 RFX5P48382 616 aaPredicted RBP17.23■□□□□ 0.35
NEDD4L-228ENST00000590248 HUNKP57058 714 aa17.23■□□□□ 0.35
NEDD4L-228ENST00000590248 IFFO2Q5TF58 517 aa17.23■□□□□ 0.35
NEDD4L-228ENST00000590248 GBA2Q9HCG7 927 aaPredicted RBP17.23■□□□□ 0.35
NEDD4L-228ENST00000590248 HIBADHP31937 336 aaKnown RBP17.22■□□□□ 0.35
NEDD4L-228ENST00000590248 FRAT1Q92837 279 aaPredicted RBP17.22■□□□□ 0.35
NEDD4L-228ENST00000590248 ZIC5Q96T25 663 aa17.22■□□□□ 0.35
NEDD4L-228ENST00000590248 MEIS3Q99687 375 aa17.22■□□□□ 0.35
NEDD4L-228ENST00000590248 HDAC9Q9UKV0 1011 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms