RNA–Protein interactions for RNA: ENST00000590020.1

NEDD4L-227, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene NEDD4L, Length 710 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-227ENST00000590020 ZNF646O15015 1829 aaPredicted RBP16.66■□□□□ 0.26
NEDD4L-227ENST00000590020 ALDH1A1P00352 501 aa16.65■□□□□ 0.26
NEDD4L-227ENST00000590020 DACT2Q5SW24 774 aa16.65■□□□□ 0.26
NEDD4L-227ENST00000590020 LDLRAD1Q5T700 205 aa16.65■□□□□ 0.26
NEDD4L-227ENST00000590020 HDGFL1Q5TGJ6 251 aa16.65■□□□□ 0.26
NEDD4L-227ENST00000590020 PODNQ7Z5L7 613 aa16.65■□□□□ 0.26
NEDD4L-227ENST00000590020 CLMNQ96JQ2 1002 aa16.65■□□□□ 0.26
NEDD4L-227ENST00000590020 XDHP47989 1333 aa16.65■□□□□ 0.26
NEDD4L-227ENST00000590020 OGFOD1Q8N543 542 aa16.64■□□□□ 0.25
NEDD4L-227ENST00000590020 SLC10A4Q96EP9 437 aa16.64■□□□□ 0.25
NEDD4L-227ENST00000590020 KIAA0100Q14667 2235 aaKnown RBP16.64■□□□□ 0.25
NEDD4L-227ENST00000590020 MANSC4A6NHS7 340 aaPredicted RBP16.63■□□□□ 0.25
NEDD4L-227ENST00000590020 MYCP01106 439 aaPredicted RBP16.63■□□□□ 0.25
NEDD4L-227ENST00000590020 ATP2B4P23634 1241 aa16.63■□□□□ 0.25
NEDD4L-227ENST00000590020 ZBTB38Q8NAP3 1195 aaPredicted RBP16.63■□□□□ 0.25
NEDD4L-227ENST00000590020 ARMC5Q96C12 935 aa16.63■□□□□ 0.25
NEDD4L-227ENST00000590020 ERO1AQ96HE7 468 aa16.63■□□□□ 0.25
NEDD4L-227ENST00000590020 BABAM1Q9NWV8 329 aa16.63■□□□□ 0.25
NEDD4L-227ENST00000590020 SZT2Q5T011 3432 aa16.63■□□□□ 0.25
NEDD4L-227ENST00000590020 SPEF2Q9C093 1822 aa16.63■□□□□ 0.25
NEDD4L-227ENST00000590020 CRHR2Q13324 411 aa16.62■□□□□ 0.25
NEDD4L-227ENST00000590020 NEUROD2Q15784 382 aa16.62■□□□□ 0.25
NEDD4L-227ENST00000590020 CCDC152Q4G0S7 254 aa16.62■□□□□ 0.25
NEDD4L-227ENST00000590020 WNK4Q96J92 1243 aa16.62■□□□□ 0.25
NEDD4L-227ENST00000590020 EFCC1Q9HA90 598 aa16.62■□□□□ 0.25
NEDD4L-227ENST00000590020 H0YGN5 161 aa16.61■□□□□ 0.25
NEDD4L-227ENST00000590020 KIAA0825Q8IV33 1275 aa16.61■□□□□ 0.25
NEDD4L-227ENST00000590020 ANKRD18AQ8IVF6 992 aa16.61■□□□□ 0.25
NEDD4L-227ENST00000590020 MYD88Q99836 296 aa16.61■□□□□ 0.25
NEDD4L-227ENST00000590020 TMEM106CQ9BVX2 250 aa16.61■□□□□ 0.25
NEDD4L-227ENST00000590020 PNNQ9H307 717 aaKnown RBP16.61■□□□□ 0.25
NEDD4L-227ENST00000590020 SSC5DA1L4H1 1573 aa16.6■□□□□ 0.25
NEDD4L-227ENST00000590020 GJA5P36382 358 aa16.6■□□□□ 0.25
NEDD4L-227ENST00000590020 TMPOP42166 694 aaKnown RBP16.6■□□□□ 0.25
NEDD4L-227ENST00000590020 INHBEP58166 350 aa16.6■□□□□ 0.25
NEDD4L-227ENST00000590020 TRIM28Q13263 835 aaKnown RBP16.6■□□□□ 0.25
NEDD4L-227ENST00000590020 RIC3Q7Z5B4 369 aa16.6■□□□□ 0.25
NEDD4L-227ENST00000590020 TXNRD3Q86VQ6 643 aa16.6■□□□□ 0.25
NEDD4L-227ENST00000590020 APOBEC3FQ8IUX4 373 aaKnown RBP16.6■□□□□ 0.25
NEDD4L-227ENST00000590020 DBF4Q9UBU7 674 aaPredicted RBP16.6■□□□□ 0.25
NEDD4L-227ENST00000590020 CHL1O00533 1208 aa16.59■□□□□ 0.25
NEDD4L-227ENST00000590020 PDE8AO60658 829 aa16.59■□□□□ 0.25
NEDD4L-227ENST00000590020 PPP4R3CPQ6ZMV5 832 aa16.59■□□□□ 0.25
NEDD4L-227ENST00000590020 ZNF333Q96JL9 665 aa16.59■□□□□ 0.25
NEDD4L-227ENST00000590020 PHAXQ9H814 394 aaKnown RBP16.59■□□□□ 0.25
NEDD4L-227ENST00000590020 PCDHAC2Q9Y5I4 1007 aa16.59■□□□□ 0.25
NEDD4L-227ENST00000590020 MED23Q9ULK4 1368 aa16.59■□□□□ 0.25
NEDD4L-227ENST00000590020 DLL1O00548 723 aa16.58■□□□□ 0.24
NEDD4L-227ENST00000590020 ZBTB48P10074 688 aaPredicted RBP16.58■□□□□ 0.24
NEDD4L-227ENST00000590020 KLRK1P26718 216 aa16.58■□□□□ 0.24
NEDD4L-227ENST00000590020 SP3Q02447 781 aa16.58■□□□□ 0.24
NEDD4L-227ENST00000590020 STRIP1Q5VSL9 837 aa16.58■□□□□ 0.24
NEDD4L-227ENST00000590020 CHRDL2Q6WN34 429 aa16.58■□□□□ 0.24
NEDD4L-227ENST00000590020 OTUD5Q96G74 571 aa16.58■□□□□ 0.24
NEDD4L-227ENST00000590020 PTPN18Q99952 460 aa16.58■□□□□ 0.24
NEDD4L-227ENST00000590020 DEFB129Q9H1M3 183 aa16.58■□□□□ 0.24
NEDD4L-227ENST00000590020 HYPKQ9NX55 129 aa16.58■□□□□ 0.24
NEDD4L-227ENST00000590020 MINPP1Q9UNW1 487 aa16.58■□□□□ 0.24
NEDD4L-227ENST00000590020 PTCH2Q9Y6C5 1203 aa16.58■□□□□ 0.24
NEDD4L-227ENST00000590020 MYO3BQ8WXR4 1341 aa16.57■□□□□ 0.24
NEDD4L-227ENST00000590020 CCT4P50991 539 aaKnown RBP16.57■□□□□ 0.24
NEDD4L-227ENST00000590020 SLC4A8Q2Y0W8 1093 aa16.57■□□□□ 0.24
NEDD4L-227ENST00000590020 CCDC146Q8IYE0 955 aa16.57■□□□□ 0.24
NEDD4L-227ENST00000590020 ZBED3Q96IU2 234 aaPredicted RBP16.57■□□□□ 0.24
NEDD4L-227ENST00000590020 LAMB1P07942 1786 aa16.56■□□□□ 0.24
NEDD4L-227ENST00000590020 TRIOBPQ9H2D6 2365 aa16.56■□□□□ 0.24
NEDD4L-227ENST00000590020 PCCAP05165 728 aaPredicted RBP16.56■□□□□ 0.24
NEDD4L-227ENST00000590020 HOXD11P31277 338 aaPredicted RBP16.56■□□□□ 0.24
NEDD4L-227ENST00000590020 LMOD3Q0VAK6 560 aa16.56■□□□□ 0.24
NEDD4L-227ENST00000590020 MAP3K11Q16584 847 aa16.56■□□□□ 0.24
NEDD4L-227ENST00000590020 SLC9C1Q4G0N8 1177 aa16.56■□□□□ 0.24
NEDD4L-227ENST00000590020 TTLL5Q6EMB2 1281 aa16.56■□□□□ 0.24
NEDD4L-227ENST00000590020 CLRN2A0PK11 232 aa16.55■□□□□ 0.24
NEDD4L-227ENST00000590020 GTF2IP78347 998 aa16.55■□□□□ 0.24
NEDD4L-227ENST00000590020 GOLGA2Q08379 1002 aa16.55■□□□□ 0.24
NEDD4L-227ENST00000590020 DUSP27Q5VZP5 1158 aa16.55■□□□□ 0.24
NEDD4L-227ENST00000590020 COA1Q9GZY4 146 aa16.55■□□□□ 0.24
NEDD4L-227ENST00000590020 AOX1Q06278 1338 aa16.54■□□□□ 0.24
NEDD4L-227ENST00000590020 PPP1R12BO60237 982 aaPredicted RBP16.54■□□□□ 0.24
NEDD4L-227ENST00000590020 HSP90B1P14625 803 aaKnown RBP16.54■□□□□ 0.24
NEDD4L-227ENST00000590020 NBPF12Q5TAG4 269 aaPredicted RBP16.54■□□□□ 0.24
NEDD4L-227ENST00000590020 OTUD7BQ6GQQ9 843 aa16.54■□□□□ 0.24
NEDD4L-227ENST00000590020 CCDC191Q8NCU4 936 aa16.54■□□□□ 0.24
NEDD4L-227ENST00000590020 SLC17A8Q8NDX2 589 aa16.54■□□□□ 0.24
NEDD4L-227ENST00000590020 CDC5LQ99459 802 aaKnown RBP16.54■□□□□ 0.24
NEDD4L-227ENST00000590020 GREM2Q9H772 168 aa16.54■□□□□ 0.24
NEDD4L-227ENST00000590020 CWC25Q9NXE8 425 aaPredicted RBP16.54■□□□□ 0.24
NEDD4L-227ENST00000590020 RBM27Q9P2N5 1060 aaKnown RBP16.54■□□□□ 0.24
NEDD4L-227ENST00000590020 ZSWIM8A7E2V4 1837 aa16.54■□□□□ 0.24
NEDD4L-227ENST00000590020 F8W031 263 aaPredicted RBP16.53■□□□□ 0.24
NEDD4L-227ENST00000590020 CTSWP56202 376 aa16.53■□□□□ 0.24
NEDD4L-227ENST00000590020 DLGAP5Q15398 846 aa16.53■□□□□ 0.24
NEDD4L-227ENST00000590020 SH3TC2Q8TF17 1288 aa16.53■□□□□ 0.24
NEDD4L-227ENST00000590020 ELP3Q9H9T3 547 aa16.53■□□□□ 0.24
NEDD4L-227ENST00000590020 BSDC1Q9NW68 430 aaPredicted RBP16.53■□□□□ 0.24
NEDD4L-227ENST00000590020 TRIM35Q9UPQ4 493 aa16.53■□□□□ 0.24
NEDD4L-227ENST00000590020 COL1A1P02452 1464 aaPredicted RBP16.53■□□□□ 0.24
NEDD4L-227ENST00000590020 USP2O75604 605 aaPredicted RBP16.52■□□□□ 0.24
NEDD4L-227ENST00000590020 ECM2O94769 699 aaPredicted RBP16.52■□□□□ 0.24
NEDD4L-227ENST00000590020 HOXB7P09629 217 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms