RNA–Protein interactions for RNA: ENST00000589990.1

PRKCSH-210, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-210ENST00000589990 SREBF2Q12772 1141 aa16.63■□□□□ 0.25
PRKCSH-210ENST00000589990 CCDC152Q4G0S7 254 aa16.63■□□□□ 0.25
PRKCSH-210ENST00000589990 DUSP27Q5VZP5 1158 aa16.63■□□□□ 0.25
PRKCSH-210ENST00000589990 SPRYD7Q5W111 196 aa16.63■□□□□ 0.25
PRKCSH-210ENST00000589990 OTOP1Q7RTM1 612 aa16.63■□□□□ 0.25
PRKCSH-210ENST00000589990 RIC3Q7Z5B4 369 aa16.63■□□□□ 0.25
PRKCSH-210ENST00000589990 PODNQ7Z5L7 613 aa16.63■□□□□ 0.25
PRKCSH-210ENST00000589990 FBXW7Q969H0 707 aa16.63■□□□□ 0.25
PRKCSH-210ENST00000589990 HYPKQ9NX55 129 aa16.63■□□□□ 0.25
PRKCSH-210ENST00000589990 SZT2Q5T011 3432 aa16.63■□□□□ 0.25
PRKCSH-210ENST00000589990 ATP2B4P23634 1241 aa16.62■□□□□ 0.25
PRKCSH-210ENST00000589990 FXR1P51114 621 aaKnown RBP eCLIP16.62■□□□□ 0.25
PRKCSH-210ENST00000589990 LDLRAD1Q5T700 205 aa16.62■□□□□ 0.25
PRKCSH-210ENST00000589990 CLMNQ96JQ2 1002 aa16.62■□□□□ 0.25
PRKCSH-210ENST00000589990 RBBP6Q7Z6E9 1792 aaKnown RBP16.61■□□□□ 0.25
PRKCSH-210ENST00000589990 SSC5DA1L4H1 1573 aa16.61■□□□□ 0.25
PRKCSH-210ENST00000589990 IGF2BP3O00425 579 aaKnown RBP eCLIP16.61■□□□□ 0.25
PRKCSH-210ENST00000589990 PDE8AO60658 829 aa16.61■□□□□ 0.25
PRKCSH-210ENST00000589990 PCCAP05165 728 aaPredicted RBP16.61■□□□□ 0.25
PRKCSH-210ENST00000589990 EN2P19622 333 aaPredicted RBP16.61■□□□□ 0.25
PRKCSH-210ENST00000589990 KLRK1P26718 216 aa16.61■□□□□ 0.25
PRKCSH-210ENST00000589990 ANKRD18AQ8IVF6 992 aa16.61■□□□□ 0.25
PRKCSH-210ENST00000589990 ANGEL1Q9UNK9 670 aaKnown RBP16.61■□□□□ 0.25
PRKCSH-210ENST00000589990 MED23Q9ULK4 1368 aa16.61■□□□□ 0.25
PRKCSH-210ENST00000589990 CEP290O15078 2479 aa16.6■□□□□ 0.25
PRKCSH-210ENST00000589990 HOXB7P09629 217 aa16.6■□□□□ 0.25
PRKCSH-210ENST00000589990 NF2P35240 595 aa16.6■□□□□ 0.25
PRKCSH-210ENST00000589990 IFNL1Q8IU54 200 aa16.6■□□□□ 0.25
PRKCSH-210ENST00000589990 PCDHAC2Q9Y5I4 1007 aa16.6■□□□□ 0.25
PRKCSH-210ENST00000589990 ARMC9Q7Z3E5 817 aa16.59■□□□□ 0.25
PRKCSH-210ENST00000589990 KIAA0825Q8IV33 1275 aa16.59■□□□□ 0.25
PRKCSH-210ENST00000589990 ZBED3Q96IU2 234 aaPredicted RBP16.59■□□□□ 0.25
PRKCSH-210ENST00000589990 MBIPQ9NS73 344 aa16.59■□□□□ 0.25
PRKCSH-210ENST00000589990 MINPP1Q9UNW1 487 aa16.59■□□□□ 0.25
PRKCSH-210ENST00000589990 ELL2O00472 640 aaPredicted RBP16.58■□□□□ 0.24
PRKCSH-210ENST00000589990 GOLGA2Q08379 1002 aa16.58■□□□□ 0.24
PRKCSH-210ENST00000589990 OGFOD1Q8N543 542 aa16.58■□□□□ 0.24
PRKCSH-210ENST00000589990 CD99L2Q8TCZ2 262 aa16.58■□□□□ 0.24
PRKCSH-210ENST00000589990 GREM2Q9H772 168 aa16.58■□□□□ 0.24
PRKCSH-210ENST00000589990 CWC25Q9NXE8 425 aaPredicted RBP16.58■□□□□ 0.24
PRKCSH-210ENST00000589990 PTPN22Q9Y2R2 807 aa16.58■□□□□ 0.24
PRKCSH-210ENST00000589990 LAMB1P07942 1786 aa16.58■□□□□ 0.24
PRKCSH-210ENST00000589990 TRIOBPQ9H2D6 2365 aa16.57■□□□□ 0.24
PRKCSH-210ENST00000589990 AOX1Q06278 1338 aa16.57■□□□□ 0.24
PRKCSH-210ENST00000589990 GJA5P36382 358 aa16.57■□□□□ 0.24
PRKCSH-210ENST00000589990 CCT4P50991 539 aaKnown RBP16.57■□□□□ 0.24
PRKCSH-210ENST00000589990 CTSWP56202 376 aa16.57■□□□□ 0.24
PRKCSH-210ENST00000589990 STRIP1Q5VSL9 837 aa16.57■□□□□ 0.24
PRKCSH-210ENST00000589990 CCDC191Q8NCU4 936 aa16.57■□□□□ 0.24
PRKCSH-210ENST00000589990 WNK4Q96J92 1243 aa16.57■□□□□ 0.24
PRKCSH-210ENST00000589990 CRHR2Q13324 411 aa16.56■□□□□ 0.24
PRKCSH-210ENST00000589990 TTLL11Q8NHH1 800 aa16.56■□□□□ 0.24
PRKCSH-210ENST00000589990 SLC10A4Q96EP9 437 aa16.56■□□□□ 0.24
PRKCSH-210ENST00000589990 MYH3P11055 1940 aa16.55■□□□□ 0.24
PRKCSH-210ENST00000589990 MANSC4A6NHS7 340 aaPredicted RBP16.55■□□□□ 0.24
PRKCSH-210ENST00000589990 ALDH1A1P00352 501 aa16.55■□□□□ 0.24
PRKCSH-210ENST00000589990 INTS3Q68E01 1043 aaKnown RBP16.55■□□□□ 0.24
PRKCSH-210ENST00000589990 TTLL5Q6EMB2 1281 aa16.55■□□□□ 0.24
PRKCSH-210ENST00000589990 APOBEC3FQ8IUX4 373 aaKnown RBP16.55■□□□□ 0.24
PRKCSH-210ENST00000589990 PTPN18Q99952 460 aa16.55■□□□□ 0.24
PRKCSH-210ENST00000589990 METTL22Q9BUU2 404 aaPredicted RBP16.55■□□□□ 0.24
PRKCSH-210ENST00000589990 COA1Q9GZY4 146 aa16.55■□□□□ 0.24
PRKCSH-210ENST00000589990 DEFB129Q9H1M3 183 aa16.55■□□□□ 0.24
PRKCSH-210ENST00000589990 BSDC1Q9NW68 430 aaPredicted RBP16.55■□□□□ 0.24
PRKCSH-210ENST00000589990 COLQQ9Y215 455 aaPredicted RBP16.55■□□□□ 0.24
PRKCSH-210ENST00000589990 RANBP2P49792 3224 aaKnown RBP16.54■□□□□ 0.24
PRKCSH-210ENST00000589990 MYO3BQ8WXR4 1341 aa16.54■□□□□ 0.24
PRKCSH-210ENST00000589990 IGKV5-2P06315 115 aa16.54■□□□□ 0.24
PRKCSH-210ENST00000589990 GTF2IP78347 998 aa16.54■□□□□ 0.24
PRKCSH-210ENST00000589990 CERS5Q8N5B7 392 aa16.54■□□□□ 0.24
PRKCSH-210ENST00000589990 ARMC5Q96C12 935 aa16.54■□□□□ 0.24
PRKCSH-210ENST00000589990 CDC5LQ99459 802 aaKnown RBP16.54■□□□□ 0.24
PRKCSH-210ENST00000589990 SNAP23O00161 211 aa16.53■□□□□ 0.24
PRKCSH-210ENST00000589990 HSP90B1P14625 803 aaKnown RBP16.53■□□□□ 0.24
PRKCSH-210ENST00000589990 MAP3K11Q16584 847 aa16.53■□□□□ 0.24
PRKCSH-210ENST00000589990 RUNDC1Q96C34 613 aa16.53■□□□□ 0.24
PRKCSH-210ENST00000589990 OTOFQ9HC10 1997 aa16.53■□□□□ 0.24
PRKCSH-210ENST00000589990 ZSWIM8A7E2V4 1837 aa16.52■□□□□ 0.24
PRKCSH-210ENST00000589990 CLRN2A0PK11 232 aa16.52■□□□□ 0.24
PRKCSH-210ENST00000589990 ZNF853P0CG23 659 aa16.52■□□□□ 0.24
PRKCSH-210ENST00000589990 NBPF12Q5TAG4 269 aaPredicted RBP16.52■□□□□ 0.24
PRKCSH-210ENST00000589990 C8orf58Q8NAV2 365 aa16.52■□□□□ 0.24
PRKCSH-210ENST00000589990 EFCC1Q9HA90 598 aa16.52■□□□□ 0.24
PRKCSH-210ENST00000589990 MAP3K2Q9Y2U5 619 aa16.52■□□□□ 0.24
PRKCSH-210ENST00000589990 ECM29Q5VYK3 1845 aa16.52■□□□□ 0.23
PRKCSH-210ENST00000589990 ZNF804BA4D1E1 1349 aa16.51■□□□□ 0.23
PRKCSH-210ENST00000589990 MYCP01106 439 aaPredicted RBP16.51■□□□□ 0.23
PRKCSH-210ENST00000589990 ZBTB48P10074 688 aaPredicted RBP16.51■□□□□ 0.23
PRKCSH-210ENST00000589990 INHBEP58166 350 aa16.51■□□□□ 0.23
PRKCSH-210ENST00000589990 CWF19L2Q2TBE0 894 aaKnown RBP16.51■□□□□ 0.23
PRKCSH-210ENST00000589990 ERO1AQ96HE7 468 aa16.51■□□□□ 0.23
PRKCSH-210ENST00000589990 COL1A1P02452 1464 aaPredicted RBP16.5■□□□□ 0.23
PRKCSH-210ENST00000589990 F8W031 263 aaPredicted RBP16.5■□□□□ 0.23
PRKCSH-210ENST00000589990 ZNF333Q96JL9 665 aa16.5■□□□□ 0.23
PRKCSH-210ENST00000589990 ADAMTS8Q9UP79 889 aa16.5■□□□□ 0.23
PRKCSH-210ENST00000589990 USP2O75604 605 aaPredicted RBP16.49■□□□□ 0.23
PRKCSH-210ENST00000589990 SP3Q02447 781 aa16.49■□□□□ 0.23
PRKCSH-210ENST00000589990 DLGAP5Q15398 846 aa16.49■□□□□ 0.23
PRKCSH-210ENST00000589990 CDAN1Q8IWY9 1227 aa16.49■□□□□ 0.23
PRKCSH-210ENST00000589990 CNKSR2Q8WXI2 1034 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms