RNA–Protein interactions for RNA: ENST00000589165.5

ERCC1-208, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene ERCC1, Length 1,453 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-208ENST00000589165 USP17L3A6NCW0 530 aa17.39■□□□□ 0.37
ERCC1-208ENST00000589165 USP17L4A6NCW7 530 aa17.39■□□□□ 0.37
ERCC1-208ENST00000589165 RSBN1LQ6PCB5 846 aaPredicted RBP17.39■□□□□ 0.37
ERCC1-208ENST00000589165 USP17L1Q7RTZ2 530 aa17.39■□□□□ 0.37
ERCC1-208ENST00000589165 GMLQ99445 158 aa17.39■□□□□ 0.37
ERCC1-208ENST00000589165 RIPOR2Q9Y4F9 1068 aa17.39■□□□□ 0.37
ERCC1-208ENST00000589165 SHTN1A0MZ66 631 aa17.38■□□□□ 0.37
ERCC1-208ENST00000589165 HIRAP54198 1017 aaPredicted RBP17.38■□□□□ 0.37
ERCC1-208ENST00000589165 HTRA3P83110 453 aa17.38■□□□□ 0.37
ERCC1-208ENST00000589165 PUS3Q9BZE2 481 aaKnown RBP17.38■□□□□ 0.37
ERCC1-208ENST00000589165 MROH5Q6ZUA9 1318 aa17.38■□□□□ 0.37
ERCC1-208ENST00000589165 SNAP23O00161 211 aa17.37■□□□□ 0.37
ERCC1-208ENST00000589165 DACT2Q5SW24 774 aa17.37■□□□□ 0.37
ERCC1-208ENST00000589165 STRIP1Q5VSL9 837 aa17.37■□□□□ 0.37
ERCC1-208ENST00000589165 TRPM4Q8TD43 1214 aa17.37■□□□□ 0.37
ERCC1-208ENST00000589165 FRAT1Q92837 279 aaPredicted RBP17.37■□□□□ 0.37
ERCC1-208ENST00000589165 CREBZFQ9NS37 354 aa17.37■□□□□ 0.37
ERCC1-208ENST00000589165 A0A1B0GUL6 1792 aa17.37■□□□□ 0.37
ERCC1-208ENST00000589165 SCN9AQ15858 1988 aa17.37■□□□□ 0.37
ERCC1-208ENST00000589165 RFX5P48382 616 aaPredicted RBP17.37■□□□□ 0.37
ERCC1-208ENST00000589165 ZNF280AP59817 542 aaPredicted RBP17.37■□□□□ 0.37
ERCC1-208ENST00000589165 UBE4AQ14139 1066 aa17.37■□□□□ 0.37
ERCC1-208ENST00000589165 ZKSCAN2Q63HK3 967 aa17.37■□□□□ 0.37
ERCC1-208ENST00000589165 CD209Q9NNX6 404 aa17.37■□□□□ 0.37
ERCC1-208ENST00000589165 GNAI3P08754 354 aa17.36■□□□□ 0.37
ERCC1-208ENST00000589165 SAMD7Q7Z3H4 446 aa17.36■□□□□ 0.37
ERCC1-208ENST00000589165 MEIS3Q99687 375 aa17.36■□□□□ 0.37
ERCC1-208ENST00000589165 MYO3BQ8WXR4 1341 aa17.35■□□□□ 0.37
ERCC1-208ENST00000589165 PLIN1O60240 522 aa17.35■□□□□ 0.37
ERCC1-208ENST00000589165 USP17L8P0C7I0 530 aa17.35■□□□□ 0.37
ERCC1-208ENST00000589165 MMP14P50281 582 aa17.35■□□□□ 0.37
ERCC1-208ENST00000589165 KLRG1Q96E93 195 aa17.35■□□□□ 0.37
ERCC1-208ENST00000589165 LRRFIP2Q9Y608 721 aaKnown RBP17.35■□□□□ 0.37
ERCC1-208ENST00000589165 TMEM88BA6NKF7 163 aa17.34■□□□□ 0.37
ERCC1-208ENST00000589165 EGFRP00533 1210 aa17.34■□□□□ 0.37
ERCC1-208ENST00000589165 IL1R1P14778 569 aa17.34■□□□□ 0.37
ERCC1-208ENST00000589165 PTPN12Q05209 780 aaKnown RBP17.34■□□□□ 0.37
ERCC1-208ENST00000589165 TBC1D10BQ4KMP7 808 aaPredicted RBP17.34■□□□□ 0.37
ERCC1-208ENST00000589165 LRRC24Q50LG9 513 aa17.34■□□□□ 0.37
ERCC1-208ENST00000589165 TTLL5Q6EMB2 1281 aa17.34■□□□□ 0.37
ERCC1-208ENST00000589165 ZNF804AQ7Z570 1209 aa17.34■□□□□ 0.37
ERCC1-208ENST00000589165 KLHDC4Q8TBB5 520 aa17.34■□□□□ 0.37
ERCC1-208ENST00000589165 TNNQ9UQP3 1299 aa17.34■□□□□ 0.37
ERCC1-208ENST00000589165 EYA2O00167 538 aa17.33■□□□□ 0.37
ERCC1-208ENST00000589165 METTL24Q5JXM2 366 aa17.33■□□□□ 0.37
ERCC1-208ENST00000589165 VGLL2Q8N8G2 317 aa17.33■□□□□ 0.37
ERCC1-208ENST00000589165 CLUAP1Q96AJ1 413 aa17.33■□□□□ 0.37
ERCC1-208ENST00000589165 FBXO3Q9UK99 471 aa17.33■□□□□ 0.37
ERCC1-208ENST00000589165 PDE8BO95263 885 aa17.32■□□□□ 0.36
ERCC1-208ENST00000589165 GTF2IP78347 998 aa17.32■□□□□ 0.36
ERCC1-208ENST00000589165 KIF4BQ2VIQ3 1234 aa17.32■□□□□ 0.36
ERCC1-208ENST00000589165 CDC37L1Q7L3B6 337 aa17.32■□□□□ 0.36
ERCC1-208ENST00000589165 MTX1Q13505 466 aa17.31■□□□□ 0.36
ERCC1-208ENST00000589165 RBM26Q5T8P6 1007 aaKnown RBP17.31■□□□□ 0.36
ERCC1-208ENST00000589165 JMYQ8N9B5 988 aa17.31■□□□□ 0.36
ERCC1-208ENST00000589165 PSME4Q14997 1843 aa17.31■□□□□ 0.36
ERCC1-208ENST00000589165 TRAF5O00463 557 aa17.31■□□□□ 0.36
ERCC1-208ENST00000589165 CIAO1O76071 339 aa17.31■□□□□ 0.36
ERCC1-208ENST00000589165 SASH1O94885 1247 aa17.31■□□□□ 0.36
ERCC1-208ENST00000589165 HIBADHP31937 336 aaKnown RBP17.31■□□□□ 0.36
ERCC1-208ENST00000589165 FKBP1AP62942 108 aaKnown RBP17.31■□□□□ 0.36
ERCC1-208ENST00000589165 ATG9AQ7Z3C6 839 aa17.31■□□□□ 0.36
ERCC1-208ENST00000589165 OGFOD1Q8N543 542 aa17.31■□□□□ 0.36
ERCC1-208ENST00000589165 TMEM57Q8N5G2 664 aa17.31■□□□□ 0.36
ERCC1-208ENST00000589165 FBXW7Q969H0 707 aa17.31■□□□□ 0.36
ERCC1-208ENST00000589165 FAM84BQ96KN1 310 aaPredicted RBP17.31■□□□□ 0.36
ERCC1-208ENST00000589165 MXD3Q9BW11 206 aa17.31■□□□□ 0.36
ERCC1-208ENST00000589165 GLIS2Q9BZE0 524 aaPredicted RBP17.31■□□□□ 0.36
ERCC1-208ENST00000589165 MYOZ2Q9NPC6 264 aa17.31■□□□□ 0.36
ERCC1-208ENST00000589165 TDRD7Q8NHU6 1098 aaKnown RBP17.3■□□□□ 0.36
ERCC1-208ENST00000589165 COPRSQ9NQ92 184 aa17.3■□□□□ 0.36
ERCC1-208ENST00000589165 PCNTO95613 3336 aa17.29■□□□□ 0.36
ERCC1-208ENST00000589165 GNAI2P04899 355 aa17.29■□□□□ 0.36
ERCC1-208ENST00000589165 GYG1P46976 350 aa17.29■□□□□ 0.36
ERCC1-208ENST00000589165 FMR1Q06787 632 aaKnown RBP eCLIP17.29■□□□□ 0.36
ERCC1-208ENST00000589165 PUM3Q15397 648 aaKnown RBP17.29■□□□□ 0.36
ERCC1-208ENST00000589165 CST9Q5W186 159 aa17.29■□□□□ 0.36
ERCC1-208ENST00000589165 FBXO33Q7Z6M2 555 aa17.29■□□□□ 0.36
ERCC1-208ENST00000589165 FTSJ3Q8IY81 847 aaKnown RBP17.29■□□□□ 0.36
ERCC1-208ENST00000589165 DZIP1LQ8IYY4 767 aaKnown RBP17.29■□□□□ 0.36
ERCC1-208ENST00000589165 DCPSQ96C86 337 aaKnown RBP17.29■□□□□ 0.36
ERCC1-208ENST00000589165 FGFR2P21802 821 aa17.28■□□□□ 0.36
ERCC1-208ENST00000589165 SCARF1Q14162 830 aa17.28■□□□□ 0.36
ERCC1-208ENST00000589165 KRT26Q7Z3Y9 468 aa17.28■□□□□ 0.36
ERCC1-208ENST00000589165 CERS5Q8N5B7 392 aa17.28■□□□□ 0.36
ERCC1-208ENST00000589165 FAM205AQ6ZU69 1335 aa17.28■□□□□ 0.36
ERCC1-208ENST00000589165 CNTNAP1P78357 1384 aa17.27■□□□□ 0.36
ERCC1-208ENST00000589165 IL15P40933 162 aaPredicted RBP17.27■□□□□ 0.36
ERCC1-208ENST00000589165 CAVIN4Q5BKX8 364 aa17.27■□□□□ 0.36
ERCC1-208ENST00000589165 USP48Q86UV5 1035 aa17.27■□□□□ 0.36
ERCC1-208ENST00000589165 GGA3Q9NZ52 723 aa17.27■□□□□ 0.36
ERCC1-208ENST00000589165 ZNF646O15015 1829 aaPredicted RBP17.27■□□□□ 0.35
ERCC1-208ENST00000589165 RASSF10A6NK89 507 aa17.26■□□□□ 0.35
ERCC1-208ENST00000589165 SRGAP3O43295 1099 aa17.26■□□□□ 0.35
ERCC1-208ENST00000589165 IFIT1P09914 478 aaKnown RBP17.26■□□□□ 0.35
ERCC1-208ENST00000589165 RLBP1P12271 317 aa17.26■□□□□ 0.35
ERCC1-208ENST00000589165 KIAA0825Q8IV33 1275 aa17.26■□□□□ 0.35
ERCC1-208ENST00000589165 LPIN2Q92539 896 aa17.26■□□□□ 0.35
ERCC1-208ENST00000589165 SIL1Q9H173 461 aa17.26■□□□□ 0.35
ERCC1-208ENST00000589165 HDAC9Q9UKV0 1011 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms