RNA–Protein interactions for RNA: ENST00000589104.5

KDM4B-208, Transcript of lysine demethylase 4B, humanhuman

TSL 2

Gene KDM4B, Length 3,470 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4B-208ENST00000589104 TEFQ10587 303 aa15.84■□□□□ 0.13
KDM4B-208ENST00000589104 LUZP1Q86V48 1076 aa15.84■□□□□ 0.13
KDM4B-208ENST00000589104 MAST2Q6P0Q8 1798 aa15.84■□□□□ 0.13
KDM4B-208ENST00000589104 A0A1W2PQ27 194 aa15.84■□□□□ 0.13
KDM4B-208ENST00000589104 A0A1W2PQ64 194 aa15.84■□□□□ 0.13
KDM4B-208ENST00000589104 A0A1W2PQD8 194 aa15.84■□□□□ 0.13
KDM4B-208ENST00000589104 FAM177BA6PVY3 158 aa15.84■□□□□ 0.13
KDM4B-208ENST00000589104 MCMDC2Q4G0Z9 681 aa15.84■□□□□ 0.13
KDM4B-208ENST00000589104 CCDC93Q567U6 631 aa15.84■□□□□ 0.13
KDM4B-208ENST00000589104 ANO6Q4KMQ2 910 aa15.84■□□□□ 0.13
KDM4B-208ENST00000589104 RNF20Q5VTR2 975 aa15.84■□□□□ 0.13
KDM4B-208ENST00000589104 NEK1Q96PY6 1258 aa15.84■□□□□ 0.13
KDM4B-208ENST00000589104 PLA2G12BQ9BX93 195 aa15.84■□□□□ 0.13
KDM4B-208ENST00000589104 HPS5Q9UPZ3 1129 aa15.84■□□□□ 0.13
KDM4B-208ENST00000589104 ORAI2Q96SN7 254 aa15.83■□□□□ 0.12
KDM4B-208ENST00000589104 CCDC8Q9H0W5 538 aaPredicted RBP15.83■□□□□ 0.12
KDM4B-208ENST00000589104 CGNQ9P2M7 1197 aaKnown RBP15.83■□□□□ 0.12
KDM4B-208ENST00000589104 NBPF26B4DH59 902 aa15.83■□□□□ 0.12
KDM4B-208ENST00000589104 DDX58O95786 925 aaKnown RBP15.83■□□□□ 0.12
KDM4B-208ENST00000589104 TFCP2Q12800 502 aa15.83■□□□□ 0.12
KDM4B-208ENST00000589104 NBPF14Q5TI25 921 aa15.83■□□□□ 0.12
KDM4B-208ENST00000589104 NBPF10Q6P3W6 841 aaKnown RBP15.83■□□□□ 0.12
KDM4B-208ENST00000589104 FAM173BQ6P4H8 233 aa15.83■□□□□ 0.12
KDM4B-208ENST00000589104 ELOA2Q8IYF1 753 aaPredicted RBP15.83■□□□□ 0.12
KDM4B-208ENST00000589104 NBPF15Q8N660 670 aa15.83■□□□□ 0.12
KDM4B-208ENST00000589104 PLBD2Q8NHP8 589 aa15.83■□□□□ 0.12
KDM4B-208ENST00000589104 MYH2Q9UKX2 1941 aa15.83■□□□□ 0.12
KDM4B-208ENST00000589104 C11orf57Q6ZUT1 292 aaPredicted RBP15.82■□□□□ 0.12
KDM4B-208ENST00000589104 CACTINQ8WUQ7 758 aaKnown RBP15.82■□□□□ 0.12
KDM4B-208ENST00000589104 ZNF512BQ96KM6 892 aaPredicted RBP15.82■□□□□ 0.12
KDM4B-208ENST00000589104 NBPF3Q9H094 633 aa15.82■□□□□ 0.12
KDM4B-208ENST00000589104 COL16A1Q07092 1604 aaPredicted RBP15.82■□□□□ 0.12
KDM4B-208ENST00000589104 COL4A1P02462 1669 aa15.82■□□□□ 0.12
KDM4B-208ENST00000589104 NRAPQ86VF7 1730 aa15.82■□□□□ 0.12
KDM4B-208ENST00000589104 SMTNL1A8MU46 457 aa15.82■□□□□ 0.12
KDM4B-208ENST00000589104 HMGB1P09429 215 aaKnown RBP15.82■□□□□ 0.12
KDM4B-208ENST00000589104 PTGS1P23219 599 aa15.82■□□□□ 0.12
KDM4B-208ENST00000589104 KLHDC4Q8TBB5 520 aa15.82■□□□□ 0.12
KDM4B-208ENST00000589104 ZNF496Q96IT1 587 aaPredicted RBP15.82■□□□□ 0.12
KDM4B-208ENST00000589104 RTEL1Q9NZ71 1219 aa15.82■□□□□ 0.12
KDM4B-208ENST00000589104 ZMYM6O95789 1325 aa15.82■□□□□ 0.12
KDM4B-208ENST00000589104 NCAPHQ15003 741 aa15.82■□□□□ 0.12
KDM4B-208ENST00000589104 LRRC8AQ8IWT6 810 aa15.82■□□□□ 0.12
KDM4B-208ENST00000589104 XAGE3Q8WTP9 111 aa15.82■□□□□ 0.12
KDM4B-208ENST00000589104 EDC3Q96F86 508 aaKnown RBP15.82■□□□□ 0.12
KDM4B-208ENST00000589104 TMX1Q9H3N1 280 aa15.82■□□□□ 0.12
KDM4B-208ENST00000589104 TMEM51Q9NW97 253 aa15.82■□□□□ 0.12
KDM4B-208ENST00000589104 C9orf78Q9NZ63 289 aaPredicted RBP15.82■□□□□ 0.12
KDM4B-208ENST00000589104 NRBP1Q9UHY1 535 aa15.82■□□□□ 0.12
KDM4B-208ENST00000589104 CTNNA3Q9UI47 895 aa15.82■□□□□ 0.12
KDM4B-208ENST00000589104 FBXO3Q9UK99 471 aa15.82■□□□□ 0.12
KDM4B-208ENST00000589104 USP16Q9Y5T5 823 aa15.82■□□□□ 0.12
KDM4B-208ENST00000589104 SLFNL1Q499Z3 407 aa15.81■□□□□ 0.12
KDM4B-208ENST00000589104 ANKLE2Q86XL3 938 aa15.81■□□□□ 0.12
KDM4B-208ENST00000589104 DCAF5Q96JK2 942 aa15.81■□□□□ 0.12
KDM4B-208ENST00000589104 L2HGDHQ9H9P8 463 aa15.81■□□□□ 0.12
KDM4B-208ENST00000589104 KIF3AQ9Y496 699 aa15.81■□□□□ 0.12
KDM4B-208ENST00000589104 MAST3O60307 1309 aa15.81■□□□□ 0.12
KDM4B-208ENST00000589104 SPDYE4A6NLX3 237 aa15.81■□□□□ 0.12
KDM4B-208ENST00000589104 CTAGE5O15320 804 aa15.81■□□□□ 0.12
KDM4B-208ENST00000589104 Q6ZUG5 572 aa15.81■□□□□ 0.12
KDM4B-208ENST00000589104 DHX32Q7L7V1 743 aaKnown RBP15.81■□□□□ 0.12
KDM4B-208ENST00000589104 MPNDQ8N594 471 aa15.81■□□□□ 0.12
KDM4B-208ENST00000589104 IPO4Q8TEX9 1081 aaKnown RBP15.81■□□□□ 0.12
KDM4B-208ENST00000589104 BRF1Q92994 677 aa15.81■□□□□ 0.12
KDM4B-208ENST00000589104 CACNA1SQ13698 1873 aa15.8■□□□□ 0.12
KDM4B-208ENST00000589104 A0A0G2JLW4 131 aa15.8■□□□□ 0.12
KDM4B-208ENST00000589104 MB21D2Q8IYB1 491 aaPredicted RBP15.8■□□□□ 0.12
KDM4B-208ENST00000589104 BOLA2Q9H3K6 86 aa15.8■□□□□ 0.12
KDM4B-208ENST00000589104 HPSEQ9Y251 543 aa15.8■□□□□ 0.12
KDM4B-208ENST00000589104 PDIA3P30101 505 aaKnown RBP15.8■□□□□ 0.12
KDM4B-208ENST00000589104 G3BP1Q13283 466 aaKnown RBP eCLIP15.8■□□□□ 0.122e-7■□□□□ 9.3
KDM4B-208ENST00000589104 C1orf141Q5JVX7 400 aa15.8■□□□□ 0.12
KDM4B-208ENST00000589104 LTV1Q96GA3 475 aaPredicted RBP15.8■□□□□ 0.12
KDM4B-208ENST00000589104 SPATA32Q96LK8 384 aa15.8■□□□□ 0.12
KDM4B-208ENST00000589104 SEC62Q99442 399 aaKnown RBP15.79■□□□□ 0.12
KDM4B-208ENST00000589104 MYH13Q9UKX3 1938 aa15.79■□□□□ 0.12
KDM4B-208ENST00000589104 DBNDD2Q9BQY9 259 aa15.79■□□□□ 0.12
KDM4B-208ENST00000589104 POLR3EQ9NVU0 708 aa15.79■□□□□ 0.12
KDM4B-208ENST00000589104 COL24A1Q17RW2 1714 aa15.79■□□□□ 0.12
KDM4B-208ENST00000589104 SNRPA1P09661 255 aaKnown RBP15.78■□□□□ 0.12
KDM4B-208ENST00000589104 AXDND1Q5T1B0 1012 aaPredicted RBP15.78■□□□□ 0.12
KDM4B-208ENST00000589104 ANKRD13DQ6ZTN6 518 aa15.78■□□□□ 0.12
KDM4B-208ENST00000589104 COPS6Q7L5N1 327 aa15.78■□□□□ 0.12
KDM4B-208ENST00000589104 LRMPQ12912 555 aa15.78■□□□□ 0.12
KDM4B-208ENST00000589104 TRIM28Q13263 835 aaKnown RBP15.78■□□□□ 0.12
KDM4B-208ENST00000589104 ISCA1Q9BUE6 129 aa15.78■□□□□ 0.12
KDM4B-208ENST00000589104 NEMFO60524 1076 aa15.78■□□□□ 0.12
KDM4B-208ENST00000589104 HSPD1P10809 573 aaKnown RBP15.78■□□□□ 0.12
KDM4B-208ENST00000589104 FEZ1Q99689 392 aa15.78■□□□□ 0.12
KDM4B-208ENST00000589104 TNMDQ9H2S6 317 aa15.78■□□□□ 0.12
KDM4B-208ENST00000589104 DDX60LQ5H9U9 1706 aaKnown RBP15.78■□□□□ 0.12
KDM4B-208ENST00000589104 E7EWF7 191 aa15.77■□□□□ 0.12
KDM4B-208ENST00000589104 ANTXR2P58335 489 aa15.77■□□□□ 0.12
KDM4B-208ENST00000589104 FSD1Q9BTV5 496 aa15.77■□□□□ 0.12
KDM4B-208ENST00000589104 UBXN6Q9BZV1 441 aa15.77■□□□□ 0.12
KDM4B-208ENST00000589104 PAXBP1Q9Y5B6 917 aa15.77■□□□□ 0.12
KDM4B-208ENST00000589104 CSF1RP07333 972 aa15.77■□□□□ 0.12
KDM4B-208ENST00000589104 VGLL2Q8N8G2 317 aa15.77■□□□□ 0.12
KDM4B-208ENST00000589104 TUBE1Q9UJT0 475 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms