RNA–Protein interactions for RNA: ENST00000588972.1

ATG4D-210, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 632 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-210ENST00000588972 C9orf131Q5VYM1 1079 aa11.02□□□□□ -0.65
ATG4D-210ENST00000588972 Q6ZVU0 165 aa11.02□□□□□ -0.65
ATG4D-210ENST00000588972 IFT43Q96FT9 208 aa11.02□□□□□ -0.65
ATG4D-210ENST00000588972 PHACTR1Q9C0D0 580 aa11.02□□□□□ -0.65
ATG4D-210ENST00000588972 MRS2Q9HD23 443 aa11.02□□□□□ -0.65
ATG4D-210ENST00000588972 PARP3Q9Y6F1 533 aa11.02□□□□□ -0.65
ATG4D-210ENST00000588972 CLTCL1P53675 1640 aa11.02□□□□□ -0.65
ATG4D-210ENST00000588972 PRAG1Q86YV5 1406 aa11.01□□□□□ -0.65
ATG4D-210ENST00000588972 PNMA6FA0A0J9YX94 578 aa11.01□□□□□ -0.65
ATG4D-210ENST00000588972 SORBS3O60504 671 aa11.01□□□□□ -0.65
ATG4D-210ENST00000588972 ALDH1A1P00352 501 aa11.01□□□□□ -0.65
ATG4D-210ENST00000588972 PSMD2Q13200 908 aa11.01□□□□□ -0.65
ATG4D-210ENST00000588972 TMEM87AQ8NBN3 555 aa11.01□□□□□ -0.65
ATG4D-210ENST00000588972 TRPC5Q9UL62 973 aaPredicted RBP11.01□□□□□ -0.65
ATG4D-210ENST00000588972 RAB3GAP2Q9H2M9 1393 aa11.01□□□□□ -0.65
ATG4D-210ENST00000588972 ATRNO75882 1429 aa11.01□□□□□ -0.65
ATG4D-210ENST00000588972 MEN1O00255 615 aa11□□□□□ -0.65
ATG4D-210ENST00000588972 SLC19A1P41440 591 aa11□□□□□ -0.65
ATG4D-210ENST00000588972 USP21Q9UK80 565 aa11□□□□□ -0.65
ATG4D-210ENST00000588972 SOS2Q07890 1332 aaPredicted RBP11□□□□□ -0.65
ATG4D-210ENST00000588972 MYOM2P54296 1465 aa11□□□□□ -0.65
ATG4D-210ENST00000588972 RAD51AP2Q09MP3 1159 aa10.99□□□□□ -0.65
ATG4D-210ENST00000588972 ALG1LQ6GMV1 187 aa10.99□□□□□ -0.65
ATG4D-210ENST00000588972 METTL16Q86W50 562 aaKnown RBP10.99□□□□□ -0.65
ATG4D-210ENST00000588972 AGBL1Q96MI9 1066 aa10.99□□□□□ -0.65
ATG4D-210ENST00000588972 NLRP3Q96P20 1036 aa10.99□□□□□ -0.65
ATG4D-210ENST00000588972 ZSCAN10Q96SZ4 725 aaPredicted RBP10.99□□□□□ -0.65
ATG4D-210ENST00000588972 VTI1BQ9UEU0 232 aa10.99□□□□□ -0.65
ATG4D-210ENST00000588972 KIF1BO60333 1816 aa10.99□□□□□ -0.65
ATG4D-210ENST00000588972 CDC42BPGQ6DT37 1551 aa10.99□□□□□ -0.65
ATG4D-210ENST00000588972 MARF1Q9Y4F3 1742 aaKnown RBP10.98□□□□□ -0.65
ATG4D-210ENST00000588972 C1orf53Q5VUE5 145 aa10.98□□□□□ -0.65
ATG4D-210ENST00000588972 ITPKCQ96DU7 683 aa10.98□□□□□ -0.65
ATG4D-210ENST00000588972 KLF16Q9BXK1 252 aaPredicted RBP10.98□□□□□ -0.65
ATG4D-210ENST00000588972 NIFKQ9BYG3 293 aaKnown RBP10.98□□□□□ -0.65
ATG4D-210ENST00000588972 WASF2Q9Y6W5 498 aa10.98□□□□□ -0.65
ATG4D-210ENST00000588972 ROBO2Q9HCK4 1378 aa10.98□□□□□ -0.65
ATG4D-210ENST00000588972 TREML1Q86YW5 311 aa10.97□□□□□ -0.65
ATG4D-210ENST00000588972 CFHR5Q9BXR6 569 aa10.97□□□□□ -0.65
ATG4D-210ENST00000588972 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.97□□□□□ -0.65
ATG4D-210ENST00000588972 PXDNQ92626 1479 aa10.96□□□□□ -0.65
ATG4D-210ENST00000588972 ZIC2O95409 532 aaPredicted RBP10.96□□□□□ -0.65
ATG4D-210ENST00000588972 FANCCQ00597 558 aa10.96□□□□□ -0.65
ATG4D-210ENST00000588972 RELBQ01201 579 aa10.96□□□□□ -0.65
ATG4D-210ENST00000588972 RHBDD1Q8TEB9 315 aa10.96□□□□□ -0.65
ATG4D-210ENST00000588972 PIK3R5Q8WYR1 880 aa10.96□□□□□ -0.65
ATG4D-210ENST00000588972 RNF166Q96A37 237 aaPredicted RBP10.96□□□□□ -0.65
ATG4D-210ENST00000588972 CSRNP1Q96S65 589 aa10.96□□□□□ -0.65
ATG4D-210ENST00000588972 METTL5Q9NRN9 209 aaKnown RBP10.96□□□□□ -0.65
ATG4D-210ENST00000588972 BCL9LQ86UU0 1499 aa10.95□□□□□ -0.66
ATG4D-210ENST00000588972 TXLNAP40222 546 aa10.95□□□□□ -0.66
ATG4D-210ENST00000588972 SPRYD7Q5W111 196 aa10.95□□□□□ -0.66
ATG4D-210ENST00000588972 TMEM214Q6NUQ4 689 aaKnown RBP10.95□□□□□ -0.66
ATG4D-210ENST00000588972 POTEGQ6S5H5 508 aa10.95□□□□□ -0.66
ATG4D-210ENST00000588972 NT5DC4Q86YG4 428 aa10.95□□□□□ -0.66
ATG4D-210ENST00000588972 GPR152Q8TDT2 470 aa10.95□□□□□ -0.66
ATG4D-210ENST00000588972 ORAI2Q96SN7 254 aa10.95□□□□□ -0.66
ATG4D-210ENST00000588972 ZFAND3Q9H8U3 227 aa10.95□□□□□ -0.66
ATG4D-210ENST00000588972 BCS1LQ9Y276 419 aa10.95□□□□□ -0.66
ATG4D-210ENST00000588972 NPHP3Q7Z494 1330 aa10.94□□□□□ -0.66
ATG4D-210ENST00000588972 GNA15P30679 374 aa10.94□□□□□ -0.66
ATG4D-210ENST00000588972 SF3A1Q15459 793 aaKnown RBP10.94□□□□□ -0.66
ATG4D-210ENST00000588972 FBF1Q8TES7 1133 aa10.94□□□□□ -0.66
ATG4D-210ENST00000588972 NUDT16Q96DE0 195 aaKnown RBP10.94□□□□□ -0.66
ATG4D-210ENST00000588972 ZNF395Q9H8N7 513 aaPredicted RBP10.94□□□□□ -0.66
ATG4D-210ENST00000588972 PCSK2P16519 638 aa10.93□□□□□ -0.66
ATG4D-210ENST00000588972 ORC1Q13415 861 aa10.93□□□□□ -0.66
ATG4D-210ENST00000588972 RNF34Q969K3 372 aa10.93□□□□□ -0.66
ATG4D-210ENST00000588972 GGNBP2Q9H3C7 697 aa10.93□□□□□ -0.66
ATG4D-210ENST00000588972 PPLO60437 1756 aa10.93□□□□□ -0.66
ATG4D-210ENST00000588972 BLMP54132 1417 aaPredicted RBP10.92□□□□□ -0.66
ATG4D-210ENST00000588972 GTF2E1P29083 439 aaPredicted RBP10.92□□□□□ -0.66
ATG4D-210ENST00000588972 WDR4P57081 412 aaKnown RBP10.92□□□□□ -0.66
ATG4D-210ENST00000588972 ZNF697Q5TEC3 545 aa10.92□□□□□ -0.66
ATG4D-210ENST00000588972 UBXN4Q92575 508 aa10.92□□□□□ -0.66
ATG4D-210ENST00000588972 MPHOSPH9Q99550 1183 aa10.92□□□□□ -0.66
ATG4D-210ENST00000588972 PKD2L1Q9P0L9 805 aa10.92□□□□□ -0.66
ATG4D-210ENST00000588972 LRP5O75197 1615 aa10.91□□□□□ -0.66
ATG4D-210ENST00000588972 GLI3P10071 1580 aa10.91□□□□□ -0.66
ATG4D-210ENST00000588972 EIF1AYO14602 144 aaKnown RBP10.91□□□□□ -0.66
ATG4D-210ENST00000588972 ZNF76P36508 570 aa10.91□□□□□ -0.66
ATG4D-210ENST00000588972 FOXC1Q12948 553 aa10.91□□□□□ -0.66
ATG4D-210ENST00000588972 SNIP1Q8TAD8 396 aaKnown RBP10.91□□□□□ -0.66
ATG4D-210ENST00000588972 C7orf43Q8WVR3 580 aa10.91□□□□□ -0.66
ATG4D-210ENST00000588972 GRIP2Q9C0E4 1043 aa10.91□□□□□ -0.66
ATG4D-210ENST00000588972 PPP1R1BQ9UD71 204 aaPredicted RBP10.91□□□□□ -0.66
ATG4D-210ENST00000588972 RALGAPBQ86X10 1494 aa10.91□□□□□ -0.66
ATG4D-210ENST00000588972 USP32Q8NFA0 1604 aa10.91□□□□□ -0.66
ATG4D-210ENST00000588972 LRPPRCP42704 1394 aaKnown RBP10.9□□□□□ -0.66
ATG4D-210ENST00000588972 SLIT2O94813 1529 aa10.9□□□□□ -0.66
ATG4D-210ENST00000588972 KIF1AQ12756 1690 aa10.9□□□□□ -0.66
ATG4D-210ENST00000588972 A6NHS1 94 aa10.9□□□□□ -0.66
ATG4D-210ENST00000588972 TIMP2P16035 220 aa10.9□□□□□ -0.66
ATG4D-210ENST00000588972 PLA2G4AP47712 749 aa10.9□□□□□ -0.66
ATG4D-210ENST00000588972 C8orf34Q49A92 452 aa10.9□□□□□ -0.66
ATG4D-210ENST00000588972 TGIF2Q9GZN2 237 aa10.9□□□□□ -0.66
ATG4D-210ENST00000588972 FAM13BQ9NYF5 915 aa10.9□□□□□ -0.66
ATG4D-210ENST00000588972 AK5Q9Y6K8 562 aa10.9□□□□□ -0.66
ATG4D-210ENST00000588972 RPGRIP1LQ68CZ1 1315 aa10.89□□□□□ -0.67
ATG4D-210ENST00000588972 MICAL2O94851 1124 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms