RNA–Protein interactions for RNA: ENST00000588952.5

DNMT1-216, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-216ENST00000588952 NUCB1Q02818 461 aa24.68■■□□□ 1.54
DNMT1-216ENST00000588952 GRIPAP1Q4V328 841 aa24.68■■□□□ 1.54
DNMT1-216ENST00000588952 CENPQQ7L2Z9 268 aaPredicted RBP24.68■■□□□ 1.54
DNMT1-216ENST00000588952 LPIN2Q92539 896 aa24.68■■□□□ 1.54
DNMT1-216ENST00000588952 ZNF277Q9NRM2 450 aaPredicted RBP24.68■■□□□ 1.54
DNMT1-216ENST00000588952 ARHGAP27Q6ZUM4 889 aa24.67■■□□□ 1.54
DNMT1-216ENST00000588952 AACSQ86V21 672 aa24.67■■□□□ 1.54
DNMT1-216ENST00000588952 CCDC8Q9H0W5 538 aaPredicted RBP24.67■■□□□ 1.54
DNMT1-216ENST00000588952 TAOK3Q9H2K8 898 aa24.67■■□□□ 1.54
DNMT1-216ENST00000588952 AKAP2Q9Y2D5 859 aa24.67■■□□□ 1.54
DNMT1-216ENST00000588952 COL4A5P29400 1685 aa24.66■■□□□ 1.54
DNMT1-216ENST00000588952 SLC5A1P13866 664 aa24.66■■□□□ 1.54
DNMT1-216ENST00000588952 C16orf71Q8IYS4 520 aaPredicted RBP24.66■■□□□ 1.54
DNMT1-216ENST00000588952 MED23Q9ULK4 1368 aa24.66■■□□□ 1.54
DNMT1-216ENST00000588952 LTBP3Q9NS15 1303 aa24.65■■□□□ 1.54
DNMT1-216ENST00000588952 RIMBP2O15034 1052 aa24.65■■□□□ 1.54
DNMT1-216ENST00000588952 C15orf52Q6ZUT6 534 aaKnown RBP24.65■■□□□ 1.54
DNMT1-216ENST00000588952 CLASRPQ8N2M8 674 aaKnown RBP24.65■■□□□ 1.54
DNMT1-216ENST00000588952 OTUD7AQ8TE49 926 aaPredicted RBP24.65■■□□□ 1.54
DNMT1-216ENST00000588952 DBNDD2Q9BQY9 259 aa24.65■■□□□ 1.54
DNMT1-216ENST00000588952 LNPKQ9C0E8 428 aa24.65■■□□□ 1.54
DNMT1-216ENST00000588952 DBNLQ9UJU6 430 aaKnown RBP24.65■■□□□ 1.54
DNMT1-216ENST00000588952 IFIT1P09914 478 aaKnown RBP24.64■■□□□ 1.54
DNMT1-216ENST00000588952 GYG1P46976 350 aa24.64■■□□□ 1.54
DNMT1-216ENST00000588952 AOC3Q16853 763 aa24.64■■□□□ 1.54
DNMT1-216ENST00000588952 CHD1LQ86WJ1 897 aa24.64■■□□□ 1.54
DNMT1-216ENST00000588952 XAGE2Q96GT9 111 aa24.64■■□□□ 1.54
DNMT1-216ENST00000588952 NEUROD6Q96NK8 337 aa24.64■■□□□ 1.54
DNMT1-216ENST00000588952 WASHC4Q2M389 1173 aa24.63■■□□□ 1.53
DNMT1-216ENST00000588952 SUPT20HQ8NEM7 779 aa24.63■■□□□ 1.53
DNMT1-216ENST00000588952 FAM84BQ96KN1 310 aaPredicted RBP24.63■■□□□ 1.53
DNMT1-216ENST00000588952 KIAA2012Q0VF49 1180 aa24.62■■□□□ 1.53
DNMT1-216ENST00000588952 SKAP1Q86WV1 359 aa24.62■■□□□ 1.53
DNMT1-216ENST00000588952 EYA3Q99504 573 aa24.62■■□□□ 1.53
DNMT1-216ENST00000588952 UTRNP46939 3433 aa24.61■■□□□ 1.53
DNMT1-216ENST00000588952 PPIP5K2O43314 1243 aa24.61■■□□□ 1.53
DNMT1-216ENST00000588952 PDE4AP27815 886 aa24.61■■□□□ 1.53
DNMT1-216ENST00000588952 IARSP41252 1262 aaKnown RBP24.61■■□□□ 1.53
DNMT1-216ENST00000588952 BCAMP50895 628 aa24.61■■□□□ 1.53
DNMT1-216ENST00000588952 FBXO33Q7Z6M2 555 aa24.61■■□□□ 1.53
DNMT1-216ENST00000588952 SALL3Q9BXA9 1300 aa24.61■■□□□ 1.53
DNMT1-216ENST00000588952 IFIT2P09913 472 aaKnown RBP24.6■■□□□ 1.53
DNMT1-216ENST00000588952 PHKA1P46020 1223 aa24.6■■□□□ 1.53
DNMT1-216ENST00000588952 DOK7Q18PE1 504 aa24.6■■□□□ 1.53
DNMT1-216ENST00000588952 ZC3H12CQ9C0D7 883 aaKnown RBP24.6■■□□□ 1.53
DNMT1-216ENST00000588952 SBF1O95248 1867 aa24.6■■□□□ 1.53
DNMT1-216ENST00000588952 CCDC88AQ3V6T2 1871 aa24.58■■□□□ 1.53
DNMT1-216ENST00000588952 GRIN3BO60391 1043 aa24.58■■□□□ 1.53
DNMT1-216ENST00000588952 CCDC102BQ68D86 513 aa24.58■■□□□ 1.53
DNMT1-216ENST00000588952 DBNDD1Q9H9R9 158 aa24.58■■□□□ 1.53
DNMT1-216ENST00000588952 ZBTB47Q9UFB7 747 aaPredicted RBP24.58■■□□□ 1.53
DNMT1-216ENST00000588952 HIBADHP31937 336 aaKnown RBP24.57■■□□□ 1.52
DNMT1-216ENST00000588952 TSHZ3Q63HK5 1081 aa24.57■■□□□ 1.52
DNMT1-216ENST00000588952 LARGE2Q8N3Y3 721 aa24.57■■□□□ 1.52
DNMT1-216ENST00000588952 ZNF804AQ7Z570 1209 aa24.56■■□□□ 1.52
DNMT1-216ENST00000588952 VPS33BQ9H267 617 aa24.56■■□□□ 1.52
DNMT1-216ENST00000588952 CD209Q9NNX6 404 aa24.56■■□□□ 1.52
DNMT1-216ENST00000588952 IQSEC3Q9UPP2 1182 aaPredicted RBP24.56■■□□□ 1.52
DNMT1-216ENST00000588952 COL1A1P02452 1464 aaPredicted RBP24.56■■□□□ 1.52
DNMT1-216ENST00000588952 CHD4Q14839 1912 aa24.55■■□□□ 1.52
DNMT1-216ENST00000588952 LMNB1P20700 586 aa24.55■■□□□ 1.52
DNMT1-216ENST00000588952 CAVIN4Q5BKX8 364 aa24.55■■□□□ 1.52
DNMT1-216ENST00000588952 GORABQ5T7V8 394 aa24.55■■□□□ 1.52
DNMT1-216ENST00000588952 COA1Q9GZY4 146 aa24.55■■□□□ 1.52
DNMT1-216ENST00000588952 YDJCA8MPS7 323 aa24.54■■□□□ 1.52
DNMT1-216ENST00000588952 ECE2O60344 883 aa24.54■■□□□ 1.52
DNMT1-216ENST00000588952 SCARF1Q14162 830 aa24.54■■□□□ 1.52
DNMT1-216ENST00000588952 VPS37DQ86XT2 251 aa24.54■■□□□ 1.52
DNMT1-216ENST00000588952 KCNQ5Q9NR82 932 aa24.54■■□□□ 1.52
DNMT1-216ENST00000588952 SCN9AQ15858 1988 aa24.54■■□□□ 1.52
DNMT1-216ENST00000588952 DICER1Q9UPY3 1922 aaKnown RBP24.53■■□□□ 1.52
DNMT1-216ENST00000588952 IL1R1P14778 569 aa24.53■■□□□ 1.52
DNMT1-216ENST00000588952 ARID4AP29374 1257 aaPredicted RBP24.53■■□□□ 1.52
DNMT1-216ENST00000588952 PLEKHM2Q8IWE5 1019 aa24.53■■□□□ 1.52
DNMT1-216ENST00000588952 TDRD7Q8NHU6 1098 aaKnown RBP24.53■■□□□ 1.52
DNMT1-216ENST00000588952 ZNF646O15015 1829 aaPredicted RBP24.52■■□□□ 1.52
DNMT1-216ENST00000588952 MX1P20591 662 aa24.52■■□□□ 1.52
DNMT1-216ENST00000588952 TTC39AQ5SRH9 613 aa24.52■■□□□ 1.52
DNMT1-216ENST00000588952 C9orf131Q5VYM1 1079 aa24.52■■□□□ 1.52
DNMT1-216ENST00000588952 NIM1KQ8IY84 436 aa24.52■■□□□ 1.52
DNMT1-216ENST00000588952 RNF181Q9P0P0 153 aa24.52■■□□□ 1.52
DNMT1-216ENST00000588952 MCAMP43121 646 aa24.51■■□□□ 1.51
DNMT1-216ENST00000588952 RASGRF1Q13972 1273 aa24.51■■□□□ 1.51
DNMT1-216ENST00000588952 CCDC158Q5M9N0 1113 aa24.51■■□□□ 1.51
DNMT1-216ENST00000588952 PI16Q6UXB8 463 aa24.51■■□□□ 1.51
DNMT1-216ENST00000588952 ECHDC1Q9NTX5 307 aa24.51■■□□□ 1.51
DNMT1-216ENST00000588952 STAP2Q9UGK3 403 aa24.51■■□□□ 1.51
DNMT1-216ENST00000588952 TIAM2Q8IVF5 1701 aa24.51■■□□□ 1.51
DNMT1-216ENST00000588952 G3V3G9 751 aa24.5■■□□□ 1.51
DNMT1-216ENST00000588952 PDE1AP54750 535 aa24.5■■□□□ 1.51
DNMT1-216ENST00000588952 DCAF8Q5TAQ9 597 aa24.5■■□□□ 1.51
DNMT1-216ENST00000588952 PI4K2BQ8TCG2 481 aa24.5■■□□□ 1.51
DNMT1-216ENST00000588952 ZNF512BQ96KM6 892 aaPredicted RBP24.5■■□□□ 1.51
DNMT1-216ENST00000588952 JAG2Q9Y219 1238 aa24.5■■□□□ 1.51
DNMT1-216ENST00000588952 AKAP11Q9UKA4 1901 aa24.5■■□□□ 1.51
DNMT1-216ENST00000588952 ATP5JP18859 108 aa24.49■■□□□ 1.51
DNMT1-216ENST00000588952 GNL3LQ9NVN8 582 aaKnown RBP24.49■■□□□ 1.51
DNMT1-216ENST00000588952 HMG20BQ9P0W2 317 aa24.49■■□□□ 1.51
DNMT1-216ENST00000588952 ZNRF3Q9ULT6 936 aa24.49■■□□□ 1.51
DNMT1-216ENST00000588952 NDUFB9Q9Y6M9 179 aa24.49■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 127.9 ms