RNA–Protein interactions for RNA: ENST00000588781.1

SPIDR-228, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 164 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-228ENST00000588781 SMARCC2Q8TAQ2 1214 aa8.43□□□□□ -1.06
SPIDR-228ENST00000588781 AK7Q96M32 723 aa8.43□□□□□ -1.06
SPIDR-228ENST00000588781 MAP7D2Q96T17 732 aa8.43□□□□□ -1.06
SPIDR-228ENST00000588781 TNMDQ9H2S6 317 aa8.43□□□□□ -1.06
SPIDR-228ENST00000588781 ZBTB3Q9H5J0 574 aa8.43□□□□□ -1.06
SPIDR-228ENST00000588781 ANKRD18BA2A2Z9 1011 aa8.42□□□□□ -1.06
SPIDR-228ENST00000588781 A1BGP04217 495 aa8.42□□□□□ -1.06
SPIDR-228ENST00000588781 CYP21A2P08686 494 aa8.42□□□□□ -1.06
SPIDR-228ENST00000588781 UQCRFS1P1P0C7P4 283 aa8.42□□□□□ -1.06
SPIDR-228ENST00000588781 RESTQ13127 1097 aa8.42□□□□□ -1.06
SPIDR-228ENST00000588781 DHX8Q14562 1220 aaKnown RBP8.42□□□□□ -1.06
SPIDR-228ENST00000588781 GLIPR1L2Q4G1C9 344 aa8.42□□□□□ -1.06
SPIDR-228ENST00000588781 CPLX2Q6PUV4 134 aaKnown RBP8.42□□□□□ -1.06
SPIDR-228ENST00000588781 CCDC73Q6ZRK6 1079 aa8.42□□□□□ -1.06
SPIDR-228ENST00000588781 CDC37L1Q7L3B6 337 aa8.42□□□□□ -1.06
SPIDR-228ENST00000588781 MTERF4Q7Z6M4 381 aaKnown RBP8.42□□□□□ -1.06
SPIDR-228ENST00000588781 RALYLQ86SE5 291 aaKnown RBP8.42□□□□□ -1.06
SPIDR-228ENST00000588781 FAM200AQ8TCP9 573 aa8.42□□□□□ -1.06
SPIDR-228ENST00000588781 BICD2Q8TD16 824 aa8.42□□□□□ -1.06
SPIDR-228ENST00000588781 DDX54Q8TDD1 881 aaKnown RBP8.42□□□□□ -1.06
SPIDR-228ENST00000588781 APPBP2Q92624 585 aa8.42□□□□□ -1.06
SPIDR-228ENST00000588781 ZNF512BQ96KM6 892 aaPredicted RBP8.42□□□□□ -1.06
SPIDR-228ENST00000588781 LARP6Q9BRS8 491 aaKnown RBP8.42□□□□□ -1.06
SPIDR-228ENST00000588781 CDCA7Q9BWT1 371 aaPredicted RBP8.42□□□□□ -1.06
SPIDR-228ENST00000588781 AGXT2Q9BYV1 514 aa8.42□□□□□ -1.06
SPIDR-228ENST00000588781 CLSTN2Q9H4D0 955 aa8.42□□□□□ -1.06
SPIDR-228ENST00000588781 MAP3K15Q6ZN16 1313 aa8.42□□□□□ -1.06
SPIDR-228ENST00000588781 TJP1Q07157 1748 aa8.42□□□□□ -1.06
SPIDR-228ENST00000588781 ABCA3Q99758 1704 aa8.41□□□□□ -1.06
SPIDR-228ENST00000588781 PSDA5PKW4 1024 aaPredicted RBP8.41□□□□□ -1.06
SPIDR-228ENST00000588781 ERVV-1B6SEH8 477 aa8.41□□□□□ -1.06
SPIDR-228ENST00000588781 RRP9O43818 475 aaKnown RBP8.41□□□□□ -1.06
SPIDR-228ENST00000588781 CDKL5O76039 1030 aa8.41□□□□□ -1.06
SPIDR-228ENST00000588781 ADCY5O95622 1261 aa8.41□□□□□ -1.06
SPIDR-228ENST00000588781 CSF1RP07333 972 aa8.41□□□□□ -1.06
SPIDR-228ENST00000588781 HSPD1P10809 573 aaKnown RBP8.41□□□□□ -1.06
SPIDR-228ENST00000588781 HCLS1P14317 486 aaPredicted RBP8.41□□□□□ -1.06
SPIDR-228ENST00000588781 ST3GAL1Q11201 340 aa8.41□□□□□ -1.06
SPIDR-228ENST00000588781 TRDNQ13061 729 aa8.41□□□□□ -1.06
SPIDR-228ENST00000588781 STK3Q13188 491 aa8.41□□□□□ -1.06
SPIDR-228ENST00000588781 GIGYF2Q6Y7W6 1299 aaKnown RBP8.41□□□□□ -1.06
SPIDR-228ENST00000588781 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.41□□□□□ -1.06
SPIDR-228ENST00000588781 TTC6Q86TZ1 520 aa8.41□□□□□ -1.06
SPIDR-228ENST00000588781 LEO1Q8WVC0 666 aaPredicted RBP8.41□□□□□ -1.06
SPIDR-228ENST00000588781 JARID2Q92833 1246 aaPredicted RBP8.41□□□□□ -1.06
SPIDR-228ENST00000588781 BRF1Q92994 677 aa8.41□□□□□ -1.06
SPIDR-228ENST00000588781 FUCA2Q9BTY2 467 aa8.41□□□□□ -1.06
SPIDR-228ENST00000588781 STRN4Q9NRL3 753 aa8.41□□□□□ -1.06
SPIDR-228ENST00000588781 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.41□□□□□ -1.06
SPIDR-228ENST00000588781 TBC1D2BQ9UPU7 963 aa8.41□□□□□ -1.06
SPIDR-228ENST00000588781 MAST3O60307 1309 aa8.4□□□□□ -1.06
SPIDR-228ENST00000588781 E7EWF7 191 aa8.4□□□□□ -1.06
SPIDR-228ENST00000588781 PIP4K2AP48426 406 aaPredicted RBP8.4□□□□□ -1.06
SPIDR-228ENST00000588781 TIMM10P62072 90 aa8.4□□□□□ -1.06
SPIDR-228ENST00000588781 EXOSC10Q01780 885 aaKnown RBP8.4□□□□□ -1.06
SPIDR-228ENST00000588781 TYRO3Q06418 890 aa8.4□□□□□ -1.06
SPIDR-228ENST00000588781 CHAF1AQ13111 956 aaPredicted RBP8.4□□□□□ -1.06
SPIDR-228ENST00000588781 SF3B2Q13435 895 aaKnown RBP8.4□□□□□ -1.06
SPIDR-228ENST00000588781 ATP2B3Q16720 1220 aa8.4□□□□□ -1.06
SPIDR-228ENST00000588781 WASHC4Q2M389 1173 aa8.4□□□□□ -1.06
SPIDR-228ENST00000588781 METTL24Q5JXM2 366 aa8.4□□□□□ -1.06
SPIDR-228ENST00000588781 CCDC129Q6ZRS4 1044 aa8.4□□□□□ -1.06
SPIDR-228ENST00000588781 NCOA7Q8NI08 942 aa8.4□□□□□ -1.06
SPIDR-228ENST00000588781 EDC3Q96F86 508 aaKnown RBP8.4□□□□□ -1.06
SPIDR-228ENST00000588781 CHAMP1Q96JM3 812 aa8.4□□□□□ -1.06
SPIDR-228ENST00000588781 ANO8Q9HCE9 1232 aaPredicted RBP8.4□□□□□ -1.06
SPIDR-228ENST00000588781 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.4□□□□□ -1.06
SPIDR-228ENST00000588781 MROH5Q6ZUA9 1318 aa8.39□□□□□ -1.07
SPIDR-228ENST00000588781 PTPDC1A2A3K4 754 aa8.39□□□□□ -1.07
SPIDR-228ENST00000588781 GOLGA6L19H0YKK7 550 aa8.39□□□□□ -1.07
SPIDR-228ENST00000588781 ZNF213O14771 459 aa8.39□□□□□ -1.07
SPIDR-228ENST00000588781 PDE8AO60658 829 aa8.39□□□□□ -1.07
SPIDR-228ENST00000588781 KINO60870 393 aaKnown RBP8.39□□□□□ -1.07
SPIDR-228ENST00000588781 EVCP57679 992 aa8.39□□□□□ -1.07
SPIDR-228ENST00000588781 FKBP4Q02790 459 aaKnown RBP eCLIP8.39□□□□□ -1.07
SPIDR-228ENST00000588781 SCRN1Q12765 414 aa8.39□□□□□ -1.07
SPIDR-228ENST00000588781 ZRSR1Q15695 479 aaKnown RBP8.39□□□□□ -1.07
SPIDR-228ENST00000588781 LRRC24Q50LG9 513 aa8.39□□□□□ -1.07
SPIDR-228ENST00000588781 GIMAP6Q6P9H5 292 aa8.39□□□□□ -1.07
SPIDR-228ENST00000588781 RBM43Q6ZSC3 357 aaKnown RBP8.39□□□□□ -1.07
SPIDR-228ENST00000588781 BRAPQ7Z569 592 aa8.39□□□□□ -1.07
SPIDR-228ENST00000588781 FERMT3Q86UX7 667 aa8.39□□□□□ -1.07
SPIDR-228ENST00000588781 NSUN7Q8NE18 718 aaKnown RBP8.39□□□□□ -1.07
SPIDR-228ENST00000588781 PIBF1Q8WXW3 757 aa8.39□□□□□ -1.07
SPIDR-228ENST00000588781 XAGE2Q96GT9 111 aa8.39□□□□□ -1.07
SPIDR-228ENST00000588781 PRIMPOLQ96LW4 560 aa8.39□□□□□ -1.07
SPIDR-228ENST00000588781 NAT10Q9H0A0 1025 aaKnown RBP8.39□□□□□ -1.07
SPIDR-228ENST00000588781 CNNM1Q9NRU3 951 aa8.39□□□□□ -1.07
SPIDR-228ENST00000588781 RCOR1Q9UKL0 485 aa8.39□□□□□ -1.07
SPIDR-228ENST00000588781 COL14A1Q05707 1796 aaKnown RBP8.39□□□□□ -1.07
SPIDR-228ENST00000588781 TCHHQ07283 1943 aa8.39□□□□□ -1.07
SPIDR-228ENST00000588781 SHANK3Q9BYB0 1731 aa8.38□□□□□ -1.07
SPIDR-228ENST00000588781 ZMYM6O95789 1325 aa8.38□□□□□ -1.07
SPIDR-228ENST00000588781 DYNC1I1O14576 645 aa8.38□□□□□ -1.07
SPIDR-228ENST00000588781 CPLX1O14810 134 aa8.38□□□□□ -1.07
SPIDR-228ENST00000588781 NEMFO60524 1076 aa8.38□□□□□ -1.07
SPIDR-228ENST00000588781 IL6STP40189 918 aaPredicted RBP8.38□□□□□ -1.07
SPIDR-228ENST00000588781 CTSWP56202 376 aa8.38□□□□□ -1.07
SPIDR-228ENST00000588781 TPM4P67936 248 aa8.38□□□□□ -1.07
SPIDR-228ENST00000588781 UBE3CQ15386 1083 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms