RNA–Protein interactions for RNA: ENST00000588780.5

CAPNS1-205, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPNS1, Length 1,035 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-205ENST00000588780 ANGEL1Q9UNK9 670 aaKnown RBP28.21■■■□□ 2.11
CAPNS1-205ENST00000588780 PSME4Q14997 1843 aa28.2■■■□□ 2.11
CAPNS1-205ENST00000588780 PCCAP05165 728 aaPredicted RBP28.2■■■□□ 2.1
CAPNS1-205ENST00000588780 SPRYD7Q5W111 196 aa28.19■■■□□ 2.1
CAPNS1-205ENST00000588780 INTS3Q68E01 1043 aaKnown RBP28.19■■■□□ 2.1
CAPNS1-205ENST00000588780 CCDC191Q8NCU4 936 aa28.19■■■□□ 2.1
CAPNS1-205ENST00000588780 CDC5LQ99459 802 aaKnown RBP28.19■■■□□ 2.1
CAPNS1-205ENST00000588780 CFHR5Q9BXR6 569 aa28.19■■■□□ 2.1
CAPNS1-205ENST00000588780 CWC25Q9NXE8 425 aaPredicted RBP28.19■■■□□ 2.1
CAPNS1-205ENST00000588780 MYO3BQ8WXR4 1341 aa28.18■■■□□ 2.1
CAPNS1-205ENST00000588780 DACT2Q5SW24 774 aa28.18■■■□□ 2.1
CAPNS1-205ENST00000588780 APOBEC3FQ8IUX4 373 aaKnown RBP28.18■■■□□ 2.1
CAPNS1-205ENST00000588780 POTEFA5A3E0 1075 aa28.17■■■□□ 2.1
CAPNS1-205ENST00000588780 WTIPA6NIX2 430 aaPredicted RBP28.17■■■□□ 2.1
CAPNS1-205ENST00000588780 SLC10A4Q96EP9 437 aa28.17■■■□□ 2.1
CAPNS1-205ENST00000588780 PHAXQ9H814 394 aaKnown RBP28.17■■■□□ 2.1
CAPNS1-205ENST00000588780 MED23Q9ULK4 1368 aa28.16■■■□□ 2.1
CAPNS1-205ENST00000588780 MANSC4A6NHS7 340 aaPredicted RBP28.16■■■□□ 2.1
CAPNS1-205ENST00000588780 STRIP1Q5VSL9 837 aa28.15■■■□□ 2.1
CAPNS1-205ENST00000588780 OTOP1Q7RTM1 612 aa28.15■■■□□ 2.1
CAPNS1-205ENST00000588780 TRIM35Q9UPQ4 493 aa28.15■■■□□ 2.1
CAPNS1-205ENST00000588780 INHBEP58166 350 aa28.14■■■□□ 2.1
CAPNS1-205ENST00000588780 IFNL1Q8IU54 200 aa28.14■■■□□ 2.1
CAPNS1-205ENST00000588780 KIAA0825Q8IV33 1275 aa28.14■■■□□ 2.1
CAPNS1-205ENST00000588780 COA1Q9GZY4 146 aa28.14■■■□□ 2.1
CAPNS1-205ENST00000588780 FZD1Q9UP38 647 aa28.14■■■□□ 2.1
CAPNS1-205ENST00000588780 MINPP1Q9UNW1 487 aa28.13■■■□□ 2.09
CAPNS1-205ENST00000588780 ELL2O00472 640 aaPredicted RBP28.12■■■□□ 2.09
CAPNS1-205ENST00000588780 CCT4P50991 539 aaKnown RBP28.12■■■□□ 2.09
CAPNS1-205ENST00000588780 CTSWP56202 376 aa28.12■■■□□ 2.09
CAPNS1-205ENST00000588780 LDLRAD1Q5T700 205 aa28.12■■■□□ 2.09
CAPNS1-205ENST00000588780 TTLL5Q6EMB2 1281 aa28.12■■■□□ 2.09
CAPNS1-205ENST00000588780 RUNDC1Q96C34 613 aa28.12■■■□□ 2.09
CAPNS1-205ENST00000588780 ERO1AQ96HE7 468 aa28.12■■■□□ 2.09
CAPNS1-205ENST00000588780 DDX58O95786 925 aaKnown RBP28.11■■■□□ 2.09
CAPNS1-205ENST00000588780 BSDC1Q9NW68 430 aaPredicted RBP28.11■■■□□ 2.09
CAPNS1-205ENST00000588780 MMP14P50281 582 aa28.1■■■□□ 2.09
CAPNS1-205ENST00000588780 WDR43Q15061 677 aaKnown RBP eCLIP28.1■■■□□ 2.09
CAPNS1-205ENST00000588780 MBIPQ9NS73 344 aa28.1■■■□□ 2.09
CAPNS1-205ENST00000588780 PPP1R12BO60237 982 aaPredicted RBP28.09■■■□□ 2.09
CAPNS1-205ENST00000588780 OTUD7BQ6GQQ9 843 aa28.09■■■□□ 2.09
CAPNS1-205ENST00000588780 CD99L2Q8TCZ2 262 aa28.09■■■□□ 2.09
CAPNS1-205ENST00000588780 METTL22Q9BUU2 404 aaPredicted RBP28.09■■■□□ 2.09
CAPNS1-205ENST00000588780 WNK4Q96J92 1243 aa28.08■■■□□ 2.09
CAPNS1-205ENST00000588780 DEFB129Q9H1M3 183 aa28.08■■■□□ 2.09
CAPNS1-205ENST00000588780 GREM2Q9H772 168 aa28.08■■■□□ 2.09
CAPNS1-205ENST00000588780 PTPN22Q9Y2R2 807 aa28.08■■■□□ 2.09
CAPNS1-205ENST00000588780 ZBTB48P10074 688 aaPredicted RBP28.07■■■□□ 2.08
CAPNS1-205ENST00000588780 EN2P19622 333 aaPredicted RBP28.07■■■□□ 2.08
CAPNS1-205ENST00000588780 GTF2IP78347 998 aa28.07■■■□□ 2.08
CAPNS1-205ENST00000588780 RALBP1Q15311 655 aa28.07■■■□□ 2.08
CAPNS1-205ENST00000588780 DLGAP5Q15398 846 aa28.07■■■□□ 2.08
CAPNS1-205ENST00000588780 CLMNQ96JQ2 1002 aa28.07■■■□□ 2.08
CAPNS1-205ENST00000588780 TMEM106CQ9BVX2 250 aa28.07■■■□□ 2.08
CAPNS1-205ENST00000588780 EFCC1Q9HA90 598 aa28.07■■■□□ 2.08
CAPNS1-205ENST00000588780 KIAA0100Q14667 2235 aaKnown RBP28.07■■■□□ 2.08
CAPNS1-205ENST00000588780 IGF2BP3O00425 579 aaKnown RBP eCLIP28.06■■■□□ 2.087e-9■■■□□ 16.3
CAPNS1-205ENST00000588780 IGHMBP2P38935 993 aaKnown RBP28.06■■■□□ 2.08
CAPNS1-205ENST00000588780 KCNJ4P48050 445 aa28.06■■■□□ 2.08
CAPNS1-205ENST00000588780 TXNRD3Q86VQ6 643 aa28.06■■■□□ 2.08
CAPNS1-205ENST00000588780 TTLL11Q8NHH1 800 aa28.06■■■□□ 2.08
CAPNS1-205ENST00000588780 LEMD3Q9Y2U8 911 aa28.06■■■□□ 2.08
CAPNS1-205ENST00000588780 MAP3K2Q9Y2U5 619 aa28.05■■■□□ 2.08
CAPNS1-205ENST00000588780 SPEF2Q9C093 1822 aa28.04■■■□□ 2.08
CAPNS1-205ENST00000588780 ZNF804BA4D1E1 1349 aa28.03■■■□□ 2.08
CAPNS1-205ENST00000588780 FXR1P51114 621 aaKnown RBP eCLIP28.03■■■□□ 2.08
CAPNS1-205ENST00000588780 CRHR2Q13324 411 aa28.03■■■□□ 2.08
CAPNS1-205ENST00000588780 MYO1BO43795 1136 aa28.02■■■□□ 2.08
CAPNS1-205ENST00000588780 NEXNQ0ZGT2 675 aa28.02■■■□□ 2.08
CAPNS1-205ENST00000588780 SUPT20HL1Q3ZLR7 823 aa28.02■■■□□ 2.08
CAPNS1-205ENST00000588780 ANKRD2Q9GZV1 360 aa28.02■■■□□ 2.08
CAPNS1-205ENST00000588780 COL1A1P02452 1464 aaPredicted RBP28.02■■■□□ 2.08
CAPNS1-205ENST00000588780 KLRK1P26718 216 aa28.01■■■□□ 2.07
CAPNS1-205ENST00000588780 SP3Q02447 781 aa28.01■■■□□ 2.07
CAPNS1-205ENST00000588780 MPHOSPH8Q99549 860 aa28.01■■■□□ 2.07
CAPNS1-205ENST00000588780 VEZTQ9HBM0 779 aa28.01■■■□□ 2.07
CAPNS1-205ENST00000588780 F8W031 263 aaPredicted RBP28■■■□□ 2.07
CAPNS1-205ENST00000588780 IREB2P48200 963 aaKnown RBP28■■■□□ 2.07
CAPNS1-205ENST00000588780 MAP3K11Q16584 847 aa28■■■□□ 2.07
CAPNS1-205ENST00000588780 ARMC5Q96C12 935 aa28■■■□□ 2.07
CAPNS1-205ENST00000588780 ZBED3Q96IU2 234 aaPredicted RBP28■■■□□ 2.07
CAPNS1-205ENST00000588780 PPP2R3BQ9Y5P8 575 aa28■■■□□ 2.07
CAPNS1-205ENST00000588780 CLRN2A0PK11 232 aa27.99■■■□□ 2.07
CAPNS1-205ENST00000588780 CCDC30Q5VVM6 783 aa27.99■■■□□ 2.07
CAPNS1-205ENST00000588780 GNAI1P63096 354 aa27.98■■■□□ 2.07
CAPNS1-205ENST00000588780 SLC4A8Q2Y0W8 1093 aa27.98■■■□□ 2.07
CAPNS1-205ENST00000588780 CHMP4AQ9BY43 222 aa27.98■■■□□ 2.07
CAPNS1-205ENST00000588780 IFT57Q9NWB7 429 aa27.97■■■□□ 2.07
CAPNS1-205ENST00000588780 ADAMTS8Q9UP79 889 aa27.97■■■□□ 2.07
CAPNS1-205ENST00000588780 COLQQ9Y215 455 aaPredicted RBP27.97■■■□□ 2.07
CAPNS1-205ENST00000588780 PI4KAP2A4QPH2 592 aa27.96■■■□□ 2.07
CAPNS1-205ENST00000588780 MYCP01106 439 aaPredicted RBP27.96■■■□□ 2.07
CAPNS1-205ENST00000588780 IGKV5-2P06315 115 aa27.96■■■□□ 2.07
CAPNS1-205ENST00000588780 RBM5P52756 815 aaKnown RBP eCLIP27.96■■■□□ 2.072e-8■■■□□ 16.5
CAPNS1-205ENST00000588780 CALD1Q05682 793 aaKnown RBP27.96■■■□□ 2.07
CAPNS1-205ENST00000588780 ARHGEF6Q15052 776 aa27.96■■■□□ 2.07
CAPNS1-205ENST00000588780 SLC9C1Q4G0N8 1177 aa27.96■■■□□ 2.07
CAPNS1-205ENST00000588780 KSR2Q6VAB6 950 aa27.96■■■□□ 2.07
CAPNS1-205ENST00000588780 UBE3BQ7Z3V4 1068 aa27.96■■■□□ 2.07
CAPNS1-205ENST00000588780 NBPF11Q86T75 865 aa27.96■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms