RNA–Protein interactions for RNA: ENST00000588656.1

CHUK-203, Transcript of conserved helix-loop-helix ubiquitous kinase, humanhuman

TSL 3

Gene CHUK, Length 675 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHUK-203ENST00000588656 ERVV-2B6SEH9 535 aa7.62□□□□□ -1.19
CHUK-203ENST00000588656 POLRMTO00411 1230 aaKnown RBP7.62□□□□□ -1.19
CHUK-203ENST00000588656 PRKCSHP14314 528 aaPredicted RBP7.62□□□□□ -1.19
CHUK-203ENST00000588656 INTS5Q6P9B9 1019 aaKnown RBP7.62□□□□□ -1.19
CHUK-203ENST00000588656 MORC1Q86VD1 984 aa7.62□□□□□ -1.19
CHUK-203ENST00000588656 TBC1D2Q9BYX2 928 aa7.62□□□□□ -1.19
CHUK-203ENST00000588656 ZNF330Q9Y3S2 320 aaPredicted RBP7.62□□□□□ -1.19
CHUK-203ENST00000588656 BCORQ6W2J9 1755 aa7.61□□□□□ -1.19
CHUK-203ENST00000588656 PLEKHG2Q9H7P9 1386 aa7.61□□□□□ -1.19
CHUK-203ENST00000588656 ZNF511Q8NB15 262 aa7.61□□□□□ -1.19
CHUK-203ENST00000588656 KLRG1Q96E93 195 aa7.61□□□□□ -1.19
CHUK-203ENST00000588656 STK17AQ9UEE5 414 aa7.61□□□□□ -1.19
CHUK-203ENST00000588656 ZBTB1Q9Y2K1 713 aa7.61□□□□□ -1.19
CHUK-203ENST00000588656 ARFGEF2Q9Y6D5 1785 aa7.61□□□□□ -1.19
CHUK-203ENST00000588656 COL15A1P39059 1388 aa7.6□□□□□ -1.19
CHUK-203ENST00000588656 HSP90AB1P08238 724 aaKnown RBP7.6□□□□□ -1.19
CHUK-203ENST00000588656 CANXP27824 592 aaKnown RBP7.6□□□□□ -1.19
CHUK-203ENST00000588656 NFIXQ14938 502 aa7.6□□□□□ -1.19
CHUK-203ENST00000588656 RSBN1LQ6PCB5 846 aaPredicted RBP7.6□□□□□ -1.19
CHUK-203ENST00000588656 LYPD8Q6UX82 237 aa7.6□□□□□ -1.19
CHUK-203ENST00000588656 SOS1Q07889 1333 aaPredicted RBP7.59□□□□□ -1.19
CHUK-203ENST00000588656 KDM2BQ8NHM5 1336 aa7.59□□□□□ -1.19
CHUK-203ENST00000588656 TRIM66O15016 1216 aa7.59□□□□□ -1.19
CHUK-203ENST00000588656 SPTLC1O15269 473 aa7.59□□□□□ -1.19
CHUK-203ENST00000588656 HMGB2P26583 209 aaKnown RBP7.59□□□□□ -1.19
CHUK-203ENST00000588656 CTHP32929 405 aa7.59□□□□□ -1.19
CHUK-203ENST00000588656 IL13P35225 146 aa7.59□□□□□ -1.19
CHUK-203ENST00000588656 PIP4K2AP48426 406 aaPredicted RBP7.59□□□□□ -1.19
CHUK-203ENST00000588656 LINC01559Q495D7 138 aa7.59□□□□□ -1.19
CHUK-203ENST00000588656 C2CD5Q86YS7 1000 aa7.59□□□□□ -1.19
CHUK-203ENST00000588656 MRC1P22897 1456 aa7.59□□□□□ -1.19
CHUK-203ENST00000588656 DLG5Q8TDM6 1919 aa7.58□□□□□ -1.2
CHUK-203ENST00000588656 RNMTO43148 476 aaKnown RBP7.58□□□□□ -1.2
CHUK-203ENST00000588656 SERPINB2P05120 415 aa7.58□□□□□ -1.2
CHUK-203ENST00000588656 HSPA1AP0DMV8 641 aaKnown RBP7.58□□□□□ -1.2
CHUK-203ENST00000588656 HSPA1BP0DMV9 641 aaKnown RBP7.58□□□□□ -1.2
CHUK-203ENST00000588656 CYP19A1P11511 503 aaPredicted RBP7.58□□□□□ -1.2
CHUK-203ENST00000588656 TM4SF1P30408 202 aa7.58□□□□□ -1.2
CHUK-203ENST00000588656 TRIM26Q12899 539 aaPredicted RBP7.58□□□□□ -1.2
CHUK-203ENST00000588656 AMOTQ4VCS5 1084 aa7.58□□□□□ -1.2
CHUK-203ENST00000588656 PRPF38BQ5VTL8 546 aaKnown RBP7.58□□□□□ -1.2
CHUK-203ENST00000588656 NPAS3Q8IXF0 933 aa7.58□□□□□ -1.2
CHUK-203ENST00000588656 TNS4Q8IZW8 715 aa7.58□□□□□ -1.2
CHUK-203ENST00000588656 ZNF622Q969S3 477 aaKnown RBP eCLIP7.58□□□□□ -1.2
CHUK-203ENST00000588656 ZBTB3Q9H5J0 574 aa7.58□□□□□ -1.2
CHUK-203ENST00000588656 SLC52A2Q9HAB3 445 aa7.58□□□□□ -1.2
CHUK-203ENST00000588656 NXF1Q9UBU9 619 aaKnown RBP7.58□□□□□ -1.2
CHUK-203ENST00000588656 PCDHB15Q9Y5E8 787 aa7.58□□□□□ -1.2
CHUK-203ENST00000588656 NFKBIEO00221 500 aa7.57□□□□□ -1.2
CHUK-203ENST00000588656 C21orf2O43822 256 aa7.57□□□□□ -1.2
CHUK-203ENST00000588656 MTHFSDQ2M296 383 aaKnown RBP7.57□□□□□ -1.2
CHUK-203ENST00000588656 CC2D1BQ5T0F9 858 aaKnown RBP7.57□□□□□ -1.2
CHUK-203ENST00000588656 TBC1D9BQ66K14 1250 aa7.57□□□□□ -1.2
CHUK-203ENST00000588656 TRIM46Q7Z4K8 759 aa7.57□□□□□ -1.2
CHUK-203ENST00000588656 RIC3Q7Z5B4 369 aa7.57□□□□□ -1.2
CHUK-203ENST00000588656 PARP9Q8IXQ6 854 aa7.57□□□□□ -1.2
CHUK-203ENST00000588656 SMC1BQ8NDV3 1235 aa7.57□□□□□ -1.2
CHUK-203ENST00000588656 FAM174AQ8TBP5 190 aa7.57□□□□□ -1.2
CHUK-203ENST00000588656 MKRN1Q9UHC7 482 aaKnown RBP7.57□□□□□ -1.2
CHUK-203ENST00000588656 TBC1D2BQ9UPU7 963 aa7.57□□□□□ -1.2
CHUK-203ENST00000588656 LMNB1P20700 586 aa7.56□□□□□ -1.2
CHUK-203ENST00000588656 EIF4G2P78344 907 aaKnown RBP eCLIP7.56□□□□□ -1.2
CHUK-203ENST00000588656 FSTL1Q12841 308 aa7.56□□□□□ -1.2
CHUK-203ENST00000588656 AKAP4Q5JQC9 854 aa7.56□□□□□ -1.2
CHUK-203ENST00000588656 NARFQ9UHQ1 456 aa7.56□□□□□ -1.2
CHUK-203ENST00000588656 KNSTRNQ9Y448 316 aa7.56□□□□□ -1.2
CHUK-203ENST00000588656 NUP98P52948 1817 aa7.55□□□□□ -1.2
CHUK-203ENST00000588656 GLTPD2A6NH11 291 aa7.55□□□□□ -1.2
CHUK-203ENST00000588656 CFAP99D6REC4 459 aa7.55□□□□□ -1.2
CHUK-203ENST00000588656 KCNQ3O43525 872 aa7.55□□□□□ -1.2
CHUK-203ENST00000588656 BMP1P13497 986 aa7.55□□□□□ -1.2
CHUK-203ENST00000588656 OLFM4Q6UX06 510 aa7.55□□□□□ -1.2
CHUK-203ENST00000588656 TTLL6Q8N841 843 aa7.55□□□□□ -1.2
CHUK-203ENST00000588656 JMYQ8N9B5 988 aa7.55□□□□□ -1.2
CHUK-203ENST00000588656 TLL2Q9Y6L7 1015 aa7.55□□□□□ -1.2
CHUK-203ENST00000588656 TAF1P21675 1872 aa7.54□□□□□ -1.2
CHUK-203ENST00000588656 PRAMEF22A3QJZ6 481 aa7.54□□□□□ -1.2
CHUK-203ENST00000588656 FAM177BA6PVY3 158 aa7.54□□□□□ -1.2
CHUK-203ENST00000588656 H0YIN7 160 aa7.54□□□□□ -1.2
CHUK-203ENST00000588656 U2SURPO15042 1029 aaKnown RBP7.54□□□□□ -1.2
CHUK-203ENST00000588656 NPHP1O15259 732 aa7.54□□□□□ -1.2
CHUK-203ENST00000588656 DDNO94850 711 aaPredicted RBP7.54□□□□□ -1.2
CHUK-203ENST00000588656 NNTQ13423 1086 aa7.54□□□□□ -1.2
CHUK-203ENST00000588656 SCARF1Q14162 830 aa7.54□□□□□ -1.2
CHUK-203ENST00000588656 ERFEQ4G0M1 354 aa7.54□□□□□ -1.2
CHUK-203ENST00000588656 SLC51AQ86UW1 340 aa7.54□□□□□ -1.2
CHUK-203ENST00000588656 ZNF496Q96IT1 587 aaPredicted RBP7.54□□□□□ -1.2
CHUK-203ENST00000588656 ZFP42Q96MM3 310 aa7.54□□□□□ -1.2
CHUK-203ENST00000588656 CDK15Q96Q40 435 aa7.54□□□□□ -1.2
CHUK-203ENST00000588656 SCN4AP35499 1836 aa7.54□□□□□ -1.2
CHUK-203ENST00000588656 COL3A1P02461 1466 aaPredicted RBP7.54□□□□□ -1.2
CHUK-203ENST00000588656 LAMB4A4D0S4 1761 aa7.54□□□□□ -1.2
CHUK-203ENST00000588656 A1BGP04217 495 aa7.53□□□□□ -1.2
CHUK-203ENST00000588656 VEGFAP15692 232 aaPredicted RBP7.53□□□□□ -1.2
CHUK-203ENST00000588656 PRR5LQ6MZQ0 368 aa7.53□□□□□ -1.2
CHUK-203ENST00000588656 TTC5Q8N0Z6 440 aa7.53□□□□□ -1.2
CHUK-203ENST00000588656 IRF7Q92985 503 aa7.53□□□□□ -1.2
CHUK-203ENST00000588656 KIF7Q2M1P5 1343 aa7.52□□□□□ -1.2
CHUK-203ENST00000588656 TRPM7Q96QT4 1865 aa7.52□□□□□ -1.21
CHUK-203ENST00000588656 ADH1CP00326 375 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms