RNA–Protein interactions for RNA: ENST00000588618.5

ACTN4-210, Transcript of actinin alpha 4, humanhuman

TSL 1 (best)

Gene ACTN4, Length 1,729 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-210ENST00000588618 MPNDQ8N594 471 aa27.68■■■□□ 2.02
ACTN4-210ENST00000588618 UFL1O94874 794 aa27.67■■■□□ 2.02
ACTN4-210ENST00000588618 GSPT1P15170 499 aaKnown RBP27.67■■■□□ 2.02
ACTN4-210ENST00000588618 ATP2B4P23634 1241 aa27.67■■■□□ 2.02
ACTN4-210ENST00000588618 CCDC158Q5M9N0 1113 aa27.67■■■□□ 2.02
ACTN4-210ENST00000588618 ECHDC1Q9NTX5 307 aa27.67■■■□□ 2.02
ACTN4-210ENST00000588618 PODXL2Q9NZ53 605 aa27.67■■■□□ 2.02
ACTN4-210ENST00000588618 WWC3Q9ULE0 1092 aa27.67■■■□□ 2.02
ACTN4-210ENST00000588618 TTC41PQ6P2S7 1318 aa27.67■■■□□ 2.02
ACTN4-210ENST00000588618 UTRNP46939 3433 aa27.67■■■□□ 2.02
ACTN4-210ENST00000588618 ERC2O15083 957 aa27.67■■■□□ 2.02
ACTN4-210ENST00000588618 C21orf2O43822 256 aa27.67■■■□□ 2.02
ACTN4-210ENST00000588618 NLGN2Q8NFZ4 835 aa27.67■■■□□ 2.02
ACTN4-210ENST00000588618 C7orf43Q8WVR3 580 aa27.67■■■□□ 2.02
ACTN4-210ENST00000588618 KLRK1P26718 216 aa27.66■■■□□ 2.02
ACTN4-210ENST00000588618 SOGA3Q5TF21 947 aa27.66■■■□□ 2.02
ACTN4-210ENST00000588618 C6orf229H3BNL8 230 aa27.65■■■□□ 2.02
ACTN4-210ENST00000588618 GRIPAP1Q4V328 841 aa27.65■■■□□ 2.02
ACTN4-210ENST00000588618 CAVIN4Q5BKX8 364 aa27.65■■■□□ 2.02
ACTN4-210ENST00000588618 TTC22Q5TAA0 569 aa27.65■■■□□ 2.02
ACTN4-210ENST00000588618 SNED1Q8TER0 1413 aa27.65■■■□□ 2.02
ACTN4-210ENST00000588618 AOX1Q06278 1338 aa27.65■■■□□ 2.02
ACTN4-210ENST00000588618 IRS2Q9Y4H2 1338 aa27.65■■■□□ 2.02
ACTN4-210ENST00000588618 AKAP11Q9UKA4 1901 aa27.65■■■□□ 2.02
ACTN4-210ENST00000588618 VPS37DQ86XT2 251 aa27.64■■■□□ 2.02
ACTN4-210ENST00000588618 CCDC93Q567U6 631 aa27.64■■■□□ 2.01
ACTN4-210ENST00000588618 TTC39AQ5SRH9 613 aa27.64■■■□□ 2.01
ACTN4-210ENST00000588618 BCS1LQ9Y276 419 aa27.64■■■□□ 2.01
ACTN4-210ENST00000588618 TBC1D16Q8TBP0 767 aa27.63■■■□□ 2.01
ACTN4-210ENST00000588618 GPR101Q96P66 508 aaPredicted RBP27.63■■■□□ 2.01
ACTN4-210ENST00000588618 GLRX3O76003 335 aaKnown RBP27.62■■■□□ 2.01
ACTN4-210ENST00000588618 SYT17Q9BSW7 474 aa27.62■■■□□ 2.01
ACTN4-210ENST00000588618 PHKA1P46020 1223 aa27.61■■■□□ 2.01
ACTN4-210ENST00000588618 TXNRD3Q86VQ6 643 aa27.61■■■□□ 2.01
ACTN4-210ENST00000588618 RTKN2Q8IZC4 609 aa27.61■■■□□ 2.01
ACTN4-210ENST00000588618 POLLQ9UGP5 575 aa27.61■■■□□ 2.01
ACTN4-210ENST00000588618 AK9Q5TCS8 1911 aa27.61■■■□□ 2.01
ACTN4-210ENST00000588618 EYA3Q99504 573 aa27.61■■■□□ 2.01
ACTN4-210ENST00000588618 ATP5JP18859 108 aa27.6■■■□□ 2.01
ACTN4-210ENST00000588618 BMP2KLQ5H9B9 411 aa27.6■■■□□ 2.01
ACTN4-210ENST00000588618 CCDC102BQ68D86 513 aa27.6■■■□□ 2.01
ACTN4-210ENST00000588618 GNL3LQ9NVN8 582 aaKnown RBP27.6■■■□□ 2.01
ACTN4-210ENST00000588618 BCAMP50895 628 aa27.59■■■□□ 2.01
ACTN4-210ENST00000588618 SCARF1Q14162 830 aa27.59■■■□□ 2.01
ACTN4-210ENST00000588618 SUPT20HQ8NEM7 779 aa27.59■■■□□ 2.01
ACTN4-210ENST00000588618 BOLA2Q9H3K6 86 aa27.59■■■□□ 2.01
ACTN4-210ENST00000588618 GYG1P46976 350 aa27.58■■■□□ 2.01
ACTN4-210ENST00000588618 ZC3H12CQ9C0D7 883 aaKnown RBP27.58■■■□□ 2.01
ACTN4-210ENST00000588618 NDUFB9Q9Y6M9 179 aa27.58■■■□□ 2.01
ACTN4-210ENST00000588618 MAP4K4O95819 1239 aaPredicted RBP27.58■■■□□ 2.01
ACTN4-210ENST00000588618 UQCRFS1P1P0C7P4 283 aa27.58■■■□□ 2.01
ACTN4-210ENST00000588618 FAM84BQ96KN1 310 aaPredicted RBP27.58■■■□□ 2.01
ACTN4-210ENST00000588618 HIBADHP31937 336 aaKnown RBP27.57■■■□□ 2
ACTN4-210ENST00000588618 ZNF804AQ7Z570 1209 aa27.57■■■□□ 2
ACTN4-210ENST00000588618 PELP1Q8IZL8 1130 aaKnown RBP27.57■■■□□ 2
ACTN4-210ENST00000588618 MYH13Q9UKX3 1938 aa27.57■■■□□ 2
ACTN4-210ENST00000588618 MED23Q9ULK4 1368 aa27.57■■■□□ 2
ACTN4-210ENST00000588618 FRAT2O75474 233 aaPredicted RBP27.56■■■□□ 2
ACTN4-210ENST00000588618 SDSP20132 328 aa27.56■■■□□ 2
ACTN4-210ENST00000588618 WASHC4Q2M389 1173 aa27.56■■■□□ 2
ACTN4-210ENST00000588618 C15orf52Q6ZUT6 534 aaKnown RBP27.55■■■□□ 2
ACTN4-210ENST00000588618 MYO5AQ9Y4I1 1855 aaKnown RBP27.55■■■□□ 2
ACTN4-210ENST00000588618 ARFGEF1Q9Y6D6 1849 aa27.55■■■□□ 2
ACTN4-210ENST00000588618 TRIM6-TRIM34B2RNG4 842 aa27.55■■■□□ 2
ACTN4-210ENST00000588618 G3V3G9 751 aa27.55■■■□□ 2
ACTN4-210ENST00000588618 ARID4AP29374 1257 aaPredicted RBP27.55■■■□□ 2
ACTN4-210ENST00000588618 MCAMP43121 646 aa27.55■■■□□ 2
ACTN4-210ENST00000588618 DCAF8Q5TAQ9 597 aa27.55■■■□□ 2
ACTN4-210ENST00000588618 PI16Q6UXB8 463 aa27.55■■■□□ 2
ACTN4-210ENST00000588618 FBXO33Q7Z6M2 555 aa27.55■■■□□ 2
ACTN4-210ENST00000588618 EDC3Q96F86 508 aaKnown RBP27.55■■■□□ 2
ACTN4-210ENST00000588618 ZNF512BQ96KM6 892 aaPredicted RBP27.55■■■□□ 2
ACTN4-210ENST00000588618 RTFDC1Q9BY42 306 aaPredicted RBP27.55■■■□□ 2
ACTN4-210ENST00000588618 RIMBP2O15034 1052 aa27.54■■■□□ 2
ACTN4-210ENST00000588618 PPIL4Q8WUA2 492 aaKnown RBP eCLIP27.54■■■□□ 2
ACTN4-210ENST00000588618 COL1A1P02452 1464 aaPredicted RBP27.54■■■□□ 2
ACTN4-210ENST00000588618 FER1L6Q2WGJ9 1857 aa27.53■■■□□ 2
ACTN4-210ENST00000588618 PSMD1Q99460 953 aa27.53■■■□□ 2
ACTN4-210ENST00000588618 DNAJC2Q99543 621 aaKnown RBP27.53■■■□□ 2
ACTN4-210ENST00000588618 HAUS7Q99871 368 aa27.53■■■□□ 2
ACTN4-210ENST00000588618 CHD4Q14839 1912 aa27.53■■■□□ 2
ACTN4-210ENST00000588618 SNRKQ9NRH2 765 aa27.53■■■□□ 2
ACTN4-210ENST00000588618 FKBP4Q02790 459 aaKnown RBP eCLIP27.52■■■□□ 21e-6■■□□□ 12.1
ACTN4-210ENST00000588618 IQSEC3Q9UPP2 1182 aaPredicted RBP27.52■■■□□ 2
ACTN4-210ENST00000588618 RASGRF1Q13972 1273 aa27.51■■□□□ 1.99
ACTN4-210ENST00000588618 CNTROBQ8N137 903 aa27.51■■□□□ 1.99
ACTN4-210ENST00000588618 RILPL2Q969X0 211 aa27.51■■□□□ 1.99
ACTN4-210ENST00000588618 TAOK3Q9H2K8 898 aa27.5■■□□□ 1.99
ACTN4-210ENST00000588618 HMG20BQ9P0W2 317 aa27.5■■□□□ 1.99
ACTN4-210ENST00000588618 DENND2AQ9ULE3 1009 aa27.5■■□□□ 1.99
ACTN4-210ENST00000588618 SEMA3EO15041 775 aa27.49■■□□□ 1.99
ACTN4-210ENST00000588618 ZAP70P43403 619 aa27.49■■□□□ 1.99
ACTN4-210ENST00000588618 C8orf34Q49A92 452 aa27.49■■□□□ 1.99
ACTN4-210ENST00000588618 SPATA5Q8NB90 893 aa27.49■■□□□ 1.99
ACTN4-210ENST00000588618 COA1Q9GZY4 146 aa27.49■■□□□ 1.99
ACTN4-210ENST00000588618 ANTXR1Q9H6X2 564 aa27.49■■□□□ 1.99
ACTN4-210ENST00000588618 PPIP5K2O43314 1243 aa27.48■■□□□ 1.99
ACTN4-210ENST00000588618 PAG1Q9NWQ8 432 aa27.48■■□□□ 1.99
ACTN4-210ENST00000588618 EVI5LQ96CN4 794 aa27.47■■□□□ 1.99
ACTN4-210ENST00000588618 CD209Q9NNX6 404 aa27.47■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 170.4 ms