RNA–Protein interactions for RNA: ENST00000588555.1

SCAMP4-210, Transcript of secretory carrier membrane protein 4, humanhuman

Gene SCAMP4, Length 1,785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-210ENST00000588555 CWC27Q6UX04 472 aaKnown RBP31.54■■■□□ 2.64
SCAMP4-210ENST00000588555 PI16Q6UXB8 463 aa31.54■■■□□ 2.64
SCAMP4-210ENST00000588555 SNRKQ9NRH2 765 aa31.54■■■□□ 2.64
SCAMP4-210ENST00000588555 LRRC37AA6NMS7 1700 aa31.54■■■□□ 2.64
SCAMP4-210ENST00000588555 NPR1P16066 1061 aa31.53■■■□□ 2.64
SCAMP4-210ENST00000588555 ANTXR1Q9H6X2 564 aa31.53■■■□□ 2.64
SCAMP4-210ENST00000588555 ZAP70P43403 619 aa31.53■■■□□ 2.64
SCAMP4-210ENST00000588555 BCAMP50895 628 aa31.53■■■□□ 2.64
SCAMP4-210ENST00000588555 FKBP4Q02790 459 aaKnown RBP eCLIP31.53■■■□□ 2.647e-6■■■■□ 25.4
SCAMP4-210ENST00000588555 TICAM2Q86XR7 235 aa31.53■■■□□ 2.64
SCAMP4-210ENST00000588555 ZNF804BA4D1E1 1349 aa31.53■■■□□ 2.64
SCAMP4-210ENST00000588555 NMIQ13287 307 aaPredicted RBP31.51■■■□□ 2.63
SCAMP4-210ENST00000588555 FAM227BQ96M60 508 aa31.51■■■□□ 2.63
SCAMP4-210ENST00000588555 XDHP47989 1333 aa31.5■■■□□ 2.63
SCAMP4-210ENST00000588555 IRS2Q9Y4H2 1338 aa31.5■■■□□ 2.63
SCAMP4-210ENST00000588555 RUFY2Q8WXA3 655 aa31.5■■■□□ 2.63
SCAMP4-210ENST00000588555 RASGRF1Q13972 1273 aa31.49■■■□□ 2.63
SCAMP4-210ENST00000588555 TMC4Q7Z404 712 aa31.49■■■□□ 2.63
SCAMP4-210ENST00000588555 HMG20BQ9P0W2 317 aa31.49■■■□□ 2.63
SCAMP4-210ENST00000588555 A0A0D9SFI3 127 aa31.48■■■□□ 2.63
SCAMP4-210ENST00000588555 KLRK1P26718 216 aa31.48■■■□□ 2.63
SCAMP4-210ENST00000588555 KCNJ4P48050 445 aa31.48■■■□□ 2.63
SCAMP4-210ENST00000588555 MASTLQ96GX5 879 aa31.48■■■□□ 2.63
SCAMP4-210ENST00000588555 LTBP1Q14766 1721 aa31.48■■■□□ 2.63
SCAMP4-210ENST00000588555 GYG1P46976 350 aa31.48■■■□□ 2.63
SCAMP4-210ENST00000588555 FAM84BQ96KN1 310 aaPredicted RBP31.48■■■□□ 2.63
SCAMP4-210ENST00000588555 LEMD3Q9Y2U8 911 aa31.48■■■□□ 2.63
SCAMP4-210ENST00000588555 C10orf71Q711Q0 1435 aa31.47■■■□□ 2.63
SCAMP4-210ENST00000588555 RAD50Q92878 1312 aa31.47■■■□□ 2.63
SCAMP4-210ENST00000588555 CHGBP05060 677 aa31.47■■■□□ 2.63
SCAMP4-210ENST00000588555 CYP2E1P05181 493 aaPredicted RBP31.47■■■□□ 2.63
SCAMP4-210ENST00000588555 ANO2Q9NQ90 1003 aa31.47■■■□□ 2.63
SCAMP4-210ENST00000588555 ANKIB1Q9P2G1 1089 aa31.47■■■□□ 2.63
SCAMP4-210ENST00000588555 PPEF1O14829 653 aaPredicted RBP31.46■■■□□ 2.63
SCAMP4-210ENST00000588555 SPATA5Q8NB90 893 aa31.46■■■□□ 2.63
SCAMP4-210ENST00000588555 EPB41L2O43491 1005 aaKnown RBP31.45■■■□□ 2.63
SCAMP4-210ENST00000588555 ALDH1B1P30837 517 aa31.45■■■□□ 2.63
SCAMP4-210ENST00000588555 GPSM2P81274 684 aa31.45■■■□□ 2.63
SCAMP4-210ENST00000588555 FBXO33Q7Z6M2 555 aa31.45■■■□□ 2.63
SCAMP4-210ENST00000588555 MED23Q9ULK4 1368 aa31.45■■■□□ 2.63
SCAMP4-210ENST00000588555 CAVIN4Q5BKX8 364 aa31.45■■■□□ 2.62
SCAMP4-210ENST00000588555 C2CD5Q86YS7 1000 aa31.45■■■□□ 2.62
SCAMP4-210ENST00000588555 SP8Q8IXZ3 490 aa31.44■■■□□ 2.62
SCAMP4-210ENST00000588555 LSG1Q9H089 658 aaKnown RBP31.44■■■□□ 2.62
SCAMP4-210ENST00000588555 PODXL2Q9NZ53 605 aa31.44■■■□□ 2.62
SCAMP4-210ENST00000588555 KIF2CQ99661 725 aa31.43■■■□□ 2.62
SCAMP4-210ENST00000588555 ATP6V0A2Q9Y487 856 aa31.43■■■□□ 2.62
SCAMP4-210ENST00000588555 MYH7P12883 1935 aa31.43■■■□□ 2.62
SCAMP4-210ENST00000588555 H0YIN7 160 aa31.43■■■□□ 2.62
SCAMP4-210ENST00000588555 TTF1Q15361 905 aaPredicted RBP31.43■■■□□ 2.62
SCAMP4-210ENST00000588555 STYK1Q6J9G0 422 aa31.43■■■□□ 2.62
SCAMP4-210ENST00000588555 TXNRD3Q86VQ6 643 aa31.43■■■□□ 2.62
SCAMP4-210ENST00000588555 DOCK2Q92608 1830 aa31.42■■■□□ 2.62
SCAMP4-210ENST00000588555 MYO5AQ9Y4I1 1855 aaKnown RBP31.42■■■□□ 2.62
SCAMP4-210ENST00000588555 PIH1D3Q9NQM4 214 aaKnown RBP31.42■■■□□ 2.62
SCAMP4-210ENST00000588555 COL1A1P02452 1464 aaPredicted RBP31.42■■■□□ 2.62
SCAMP4-210ENST00000588555 C15orf52Q6ZUT6 534 aaKnown RBP31.41■■■□□ 2.62
SCAMP4-210ENST00000588555 GNL3LQ9NVN8 582 aaKnown RBP31.41■■■□□ 2.62
SCAMP4-210ENST00000588555 NSFL1CQ9UNZ2 370 aaKnown RBP31.41■■■□□ 2.62
SCAMP4-210ENST00000588555 CACNA1SQ13698 1873 aa31.41■■■□□ 2.62
SCAMP4-210ENST00000588555 RNF113AO15541 343 aaKnown RBP31.4■■■□□ 2.62
SCAMP4-210ENST00000588555 ZBTB22O15209 634 aa31.4■■■□□ 2.62
SCAMP4-210ENST00000588555 ZBTB7AO95365 584 aa31.4■■■□□ 2.62
SCAMP4-210ENST00000588555 R3HDM1Q15032 1099 aaKnown RBP31.4■■■□□ 2.62
SCAMP4-210ENST00000588555 SLFNL1Q499Z3 407 aa31.4■■■□□ 2.62
SCAMP4-210ENST00000588555 ZMYM1Q5SVZ6 1142 aa31.4■■■□□ 2.62
SCAMP4-210ENST00000588555 ZNF589Q86UQ0 364 aaPredicted RBP31.4■■■□□ 2.62
SCAMP4-210ENST00000588555 ATP2B4P23634 1241 aa31.39■■■□□ 2.62
SCAMP4-210ENST00000588555 CHRNA5P30532 468 aa31.39■■■□□ 2.62
SCAMP4-210ENST00000588555 HIBADHP31937 336 aaKnown RBP31.39■■■□□ 2.62
SCAMP4-210ENST00000588555 VPS37DQ86XT2 251 aa31.39■■■□□ 2.62
SCAMP4-210ENST00000588555 ZNF622Q969S3 477 aaKnown RBP eCLIP31.39■■■□□ 2.62
SCAMP4-210ENST00000588555 SEC62Q99442 399 aaKnown RBP31.39■■■□□ 2.62
SCAMP4-210ENST00000588555 IQSEC3Q9UPP2 1182 aaPredicted RBP31.39■■■□□ 2.62
SCAMP4-210ENST00000588555 KIF13BQ9NQT8 1826 aa31.38■■■□□ 2.61
SCAMP4-210ENST00000588555 ZFYP08048 801 aaPredicted RBP31.38■■■□□ 2.61
SCAMP4-210ENST00000588555 LRRFIP1Q32MZ4 808 aaKnown RBP31.38■■■□□ 2.61
SCAMP4-210ENST00000588555 GGA1Q9UJY5 639 aa31.38■■■□□ 2.61
SCAMP4-210ENST00000588555 DLEC1Q9Y238 1755 aa31.38■■■□□ 2.61
SCAMP4-210ENST00000588555 UFL1O94874 794 aa31.38■■■□□ 2.61
SCAMP4-210ENST00000588555 KIAA1211Q6ZU35 1233 aa31.38■■■□□ 2.61
SCAMP4-210ENST00000588555 IPO9Q96P70 1041 aaKnown RBP31.38■■■□□ 2.61
SCAMP4-210ENST00000588555 MTFR1LQ9H019 292 aa31.38■■■□□ 2.61
SCAMP4-210ENST00000588555 HELLSQ9NRZ9 838 aa31.38■■■□□ 2.61
SCAMP4-210ENST00000588555 DUOX1Q9NRD9 1551 aa31.37■■■□□ 2.61
SCAMP4-210ENST00000588555 SEMA3EO15041 775 aa31.37■■■□□ 2.61
SCAMP4-210ENST00000588555 MCMDC2Q4G0Z9 681 aa31.37■■■□□ 2.61
SCAMP4-210ENST00000588555 CCDC171Q6TFL3 1326 aa31.37■■■□□ 2.61
SCAMP4-210ENST00000588555 MYH13Q9UKX3 1938 aa31.36■■■□□ 2.61
SCAMP4-210ENST00000588555 PTH1RQ03431 593 aa31.36■■■□□ 2.61
SCAMP4-210ENST00000588555 TBC1D16Q8TBP0 767 aa31.36■■■□□ 2.61
SCAMP4-210ENST00000588555 POLLQ9UGP5 575 aa31.36■■■□□ 2.61
SCAMP4-210ENST00000588555 SLX4Q8IY92 1834 aa31.36■■■□□ 2.61
SCAMP4-210ENST00000588555 GPR101Q96P66 508 aaPredicted RBP31.35■■■□□ 2.61
SCAMP4-210ENST00000588555 DDX24Q9GZR7 859 aaKnown RBP eCLIP31.35■■■□□ 2.61
SCAMP4-210ENST00000588555 DENND2AQ9ULE3 1009 aa31.35■■■□□ 2.61
SCAMP4-210ENST00000588555 PDS5AQ29RF7 1337 aaKnown RBP31.35■■■□□ 2.61
SCAMP4-210ENST00000588555 OLFM4Q6UX06 510 aa31.35■■■□□ 2.61
SCAMP4-210ENST00000588555 DDRGK1Q96HY6 314 aa31.35■■■□□ 2.61
SCAMP4-210ENST00000588555 PRPF40BQ6NWY9 871 aaKnown RBP31.34■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms