RNA–Protein interactions for RNA: ENST00000588534.1

ZNF554-202, Transcript of zinc finger protein 554, humanhuman

TSL 2

Gene ZNF554, Length 4,029 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF554-202ENST00000588534 LTBP4Q8N2S1 1624 aa8.85□□□□□ -0.99
ZNF554-202ENST00000588534 ITPK1Q13572 414 aa8.85□□□□□ -0.99
ZNF554-202ENST00000588534 LINC00116Q8NCU8 138 aa8.85□□□□□ -0.99
ZNF554-202ENST00000588534 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.85□□□□□ -0.99
ZNF554-202ENST00000588534 BRIP1Q9BX63 1249 aa8.85□□□□□ -0.99
ZNF554-202ENST00000588534 DDX11L8A8MPP1 907 aa8.85□□□□□ -0.99
ZNF554-202ENST00000588534 MMP10P09238 476 aa8.85□□□□□ -0.99
ZNF554-202ENST00000588534 RRP12Q5JTH9 1297 aaKnown RBP8.85□□□□□ -0.99
ZNF554-202ENST00000588534 TMTC2Q8N394 836 aa8.85□□□□□ -0.99
ZNF554-202ENST00000588534 SPRYD3Q8NCJ5 442 aa8.85□□□□□ -0.99
ZNF554-202ENST00000588534 WASF1Q92558 559 aa8.85□□□□□ -0.99
ZNF554-202ENST00000588534 MKNK2Q9HBH9 465 aa8.85□□□□□ -0.99
ZNF554-202ENST00000588534 ZNF219Q9P2Y4 722 aaPredicted RBP8.85□□□□□ -0.99
ZNF554-202ENST00000588534 SRP68Q9UHB9 627 aaKnown RBP8.85□□□□□ -0.99
ZNF554-202ENST00000588534 RGPD8O14715 1765 aaPredicted RBP8.84□□□□□ -0.99
ZNF554-202ENST00000588534 C16orf71Q8IYS4 520 aaPredicted RBP8.84□□□□□ -0.99
ZNF554-202ENST00000588534 ZNF444Q8N0Y2 327 aaPredicted RBP8.84□□□□□ -0.99
ZNF554-202ENST00000588534 APPBP2Q92624 585 aa8.84□□□□□ -0.99
ZNF554-202ENST00000588534 KRT23Q9C075 422 aa8.84□□□□□ -0.99
ZNF554-202ENST00000588534 MAGEB6P1A0A0J9YX57 407 aa8.84□□□□□ -0.99
ZNF554-202ENST00000588534 K7ELQ4 463 aaPredicted RBP8.84□□□□□ -0.99
ZNF554-202ENST00000588534 PTPN12Q05209 780 aaKnown RBP8.84□□□□□ -0.99
ZNF554-202ENST00000588534 SF3B3Q15393 1217 aaKnown RBP8.84□□□□□ -0.99
ZNF554-202ENST00000588534 CRACR2BQ8N4Y2 399 aaPredicted RBP8.84□□□□□ -0.99
ZNF554-202ENST00000588534 CHMLP26374 656 aa8.84□□□□□ -0.99
ZNF554-202ENST00000588534 CHRNDQ07001 517 aa8.84□□□□□ -0.99
ZNF554-202ENST00000588534 PRPF40BQ6NWY9 871 aaKnown RBP8.84□□□□□ -0.99
ZNF554-202ENST00000588534 INTS5Q6P9B9 1019 aaKnown RBP8.84□□□□□ -0.99
ZNF554-202ENST00000588534 CIZ1Q9ULV3 898 aaPredicted RBP8.84□□□□□ -0.99
ZNF554-202ENST00000588534 ONECUT3O60422 494 aaPredicted RBP8.83□□□□□ -1
ZNF554-202ENST00000588534 SF3A1Q15459 793 aaKnown RBP8.83□□□□□ -1
ZNF554-202ENST00000588534 STRCQ7RTU9 1775 aa8.83□□□□□ -1
ZNF554-202ENST00000588534 PPEF1O14829 653 aaPredicted RBP8.83□□□□□ -1
ZNF554-202ENST00000588534 SKOR2Q2VWA4 1001 aaPredicted RBP8.83□□□□□ -1
ZNF554-202ENST00000588534 RTKN2Q8IZC4 609 aa8.83□□□□□ -1
ZNF554-202ENST00000588534 SPATA5Q8NB90 893 aa8.83□□□□□ -1
ZNF554-202ENST00000588534 NCOA7Q8NI08 942 aa8.83□□□□□ -1
ZNF554-202ENST00000588534 KLHDC4Q8TBB5 520 aa8.83□□□□□ -1
ZNF554-202ENST00000588534 ZNF804BA4D1E1 1349 aa8.83□□□□□ -1
ZNF554-202ENST00000588534 USP42Q9H9J4 1324 aaKnown RBP8.83□□□□□ -1
ZNF554-202ENST00000588534 SHPRHQ149N8 1683 aa8.83□□□□□ -1
ZNF554-202ENST00000588534 EN1Q05925 392 aaPredicted RBP8.83□□□□□ -1
ZNF554-202ENST00000588534 EAF2Q96CJ1 260 aaPredicted RBP8.83□□□□□ -1
ZNF554-202ENST00000588534 HAUS7Q99871 368 aa8.83□□□□□ -1
ZNF554-202ENST00000588534 EIF6P56537 245 aaKnown RBP8.83□□□□□ -1
ZNF554-202ENST00000588534 KCNQ4P56696 695 aa8.83□□□□□ -1
ZNF554-202ENST00000588534 NFIXQ14938 502 aa8.83□□□□□ -1
ZNF554-202ENST00000588534 TBC1D9BQ66K14 1250 aa8.83□□□□□ -1
ZNF554-202ENST00000588534 MFSD6Q6ZSS7 791 aa8.83□□□□□ -1
ZNF554-202ENST00000588534 CRAMP1Q96RY5 1269 aa8.83□□□□□ -1
ZNF554-202ENST00000588534 CCDC171Q6TFL3 1326 aa8.82□□□□□ -1
ZNF554-202ENST00000588534 MINDY4BA8MYZ0 360 aa8.82□□□□□ -1
ZNF554-202ENST00000588534 NT5C2P49902 561 aa8.82□□□□□ -1
ZNF554-202ENST00000588534 SLC15A2Q16348 729 aa8.82□□□□□ -1
ZNF554-202ENST00000588534 NIM1KQ8IY84 436 aa8.82□□□□□ -1
ZNF554-202ENST00000588534 HOOK2Q96ED9 719 aa8.82□□□□□ -1
ZNF554-202ENST00000588534 TUBGCP6Q96RT7 1819 aa8.82□□□□□ -1
ZNF554-202ENST00000588534 CSF1RP07333 972 aa8.82□□□□□ -1
ZNF554-202ENST00000588534 CASTP20810 708 aaKnown RBP8.82□□□□□ -1
ZNF554-202ENST00000588534 CCDC93Q567U6 631 aa8.82□□□□□ -1
ZNF554-202ENST00000588534 MSL1Q68DK7 614 aa8.82□□□□□ -1
ZNF554-202ENST00000588534 TTC6Q86TZ1 520 aa8.82□□□□□ -1
ZNF554-202ENST00000588534 LARGE2Q8N3Y3 721 aa8.82□□□□□ -1
ZNF554-202ENST00000588534 TBC1D32Q96NH3 1257 aa8.82□□□□□ -1
ZNF554-202ENST00000588534 SLC4A4Q9Y6R1 1079 aa8.82□□□□□ -1
ZNF554-202ENST00000588534 TNNI2P48788 182 aa8.82□□□□□ -1
ZNF554-202ENST00000588534 NMIQ13287 307 aaPredicted RBP8.82□□□□□ -1
ZNF554-202ENST00000588534 SLC10A5Q5PT55 438 aa8.82□□□□□ -1
ZNF554-202ENST00000588534 ESR2Q92731 530 aa8.82□□□□□ -1
ZNF554-202ENST00000588534 NEK1Q96PY6 1258 aa8.82□□□□□ -1
ZNF554-202ENST00000588534 ABCC12Q96J65 1359 aa8.81□□□□□ -1
ZNF554-202ENST00000588534 MARCH6O60337 910 aa8.81□□□□□ -1
ZNF554-202ENST00000588534 TRAF1Q13077 416 aa8.81□□□□□ -1
ZNF554-202ENST00000588534 NBR1Q14596 966 aa8.81□□□□□ -1
ZNF554-202ENST00000588534 LRRC24Q50LG9 513 aa8.81□□□□□ -1
ZNF554-202ENST00000588534 TSHZ3Q63HK5 1081 aa8.81□□□□□ -1
ZNF554-202ENST00000588534 CCDC102BQ68D86 513 aa8.81□□□□□ -1
ZNF554-202ENST00000588534 CABP5Q9NP86 173 aa8.81□□□□□ -1
ZNF554-202ENST00000588534 LMO7Q8WWI1 1683 aa8.81□□□□□ -1
ZNF554-202ENST00000588534 LTN1O94822 1766 aa8.81□□□□□ -1
ZNF554-202ENST00000588534 A0A0U1RQG5 324 aaPredicted RBP8.81□□□□□ -1
ZNF554-202ENST00000588534 RAD21O60216 631 aa8.81□□□□□ -1
ZNF554-202ENST00000588534 TAF5LO75529 589 aa8.81□□□□□ -1
ZNF554-202ENST00000588534 MCM5P33992 734 aa8.81□□□□□ -1
ZNF554-202ENST00000588534 HMGN5P82970 282 aaKnown RBP8.81□□□□□ -1
ZNF554-202ENST00000588534 MAGEB6Q8N7X4 407 aa8.81□□□□□ -1
ZNF554-202ENST00000588534 TTLL6Q8N841 843 aa8.81□□□□□ -1
ZNF554-202ENST00000588534 LIMCH1Q9UPQ0 1083 aa8.81□□□□□ -1
ZNF554-202ENST00000588534 DISP2A7MBM2 1401 aa8.81□□□□□ -1
ZNF554-202ENST00000588534 ATRNO75882 1429 aa8.81□□□□□ -1
ZNF554-202ENST00000588534 PARP4Q9UKK3 1724 aaKnown RBP8.81□□□□□ -1
ZNF554-202ENST00000588534 PEAK1Q9H792 1746 aa8.8□□□□□ -1
ZNF554-202ENST00000588534 RIMBP2O15034 1052 aa8.8□□□□□ -1
ZNF554-202ENST00000588534 FOXO4P98177 505 aa8.8□□□□□ -1
ZNF554-202ENST00000588534 UBE3CQ15386 1083 aa8.8□□□□□ -1
ZNF554-202ENST00000588534 MCTP1Q6DN14 999 aa8.8□□□□□ -1
ZNF554-202ENST00000588534 RBM8AQ9Y5S9 174 aaKnown RBP8.8□□□□□ -1
ZNF554-202ENST00000588534 LMOD1P29536 600 aaPredicted RBP8.8□□□□□ -1
ZNF554-202ENST00000588534 SIRT2Q8IXJ6 389 aa8.8□□□□□ -1
ZNF554-202ENST00000588534 ALS2Q96Q42 1657 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms