RNA–Protein interactions for RNA: ENST00000588284.1

CHMP1B-202, Transcript of charged multivesicular body protein 1B, humanhuman

TSL 3

Gene CHMP1B, Length 435 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1B-202ENST00000588284 CRY2Q49AN0 593 aa12.72□□□□□ -0.37
CHMP1B-202ENST00000588284 TMC4Q7Z404 712 aa12.72□□□□□ -0.37
CHMP1B-202ENST00000588284 DEFB132Q7Z7B7 95 aa12.72□□□□□ -0.37
CHMP1B-202ENST00000588284 CCDC24Q8N4L8 307 aa12.72□□□□□ -0.37
CHMP1B-202ENST00000588284 HELBQ8NG08 1087 aaPredicted RBP12.72□□□□□ -0.37
CHMP1B-202ENST00000588284 CELF1Q92879 486 aaKnown RBP12.72□□□□□ -0.37
CHMP1B-202ENST00000588284 CRAMP1Q96RY5 1269 aa12.72□□□□□ -0.37
CHMP1B-202ENST00000588284 MMP10P09238 476 aa12.71□□□□□ -0.37
CHMP1B-202ENST00000588284 RBM25P49756 843 aaKnown RBP12.71□□□□□ -0.37
CHMP1B-202ENST00000588284 FXR2P51116 673 aaKnown RBP eCLIP12.71□□□□□ -0.37
CHMP1B-202ENST00000588284 KIAA1211Q6ZU35 1233 aa12.71□□□□□ -0.37
CHMP1B-202ENST00000588284 DNAJC2Q99543 621 aaKnown RBP12.71□□□□□ -0.37
CHMP1B-202ENST00000588284 FSD1Q9BTV5 496 aa12.71□□□□□ -0.37
CHMP1B-202ENST00000588284 USP26Q9BXU7 913 aa12.71□□□□□ -0.37
CHMP1B-202ENST00000588284 CREBZFQ9NS37 354 aa12.71□□□□□ -0.37
CHMP1B-202ENST00000588284 GNL3LQ9NVN8 582 aaKnown RBP12.71□□□□□ -0.37
CHMP1B-202ENST00000588284 PAG1Q9NWQ8 432 aa12.71□□□□□ -0.37
CHMP1B-202ENST00000588284 TAF5LO75529 589 aa12.7□□□□□ -0.38
CHMP1B-202ENST00000588284 MCCP23508 829 aa12.7□□□□□ -0.38
CHMP1B-202ENST00000588284 ADORA1P30542 326 aa12.7□□□□□ -0.38
CHMP1B-202ENST00000588284 ALDH1B1P30837 517 aa12.7□□□□□ -0.38
CHMP1B-202ENST00000588284 TTF1Q15361 905 aaPredicted RBP12.7□□□□□ -0.38
CHMP1B-202ENST00000588284 CAVIN4Q5BKX8 364 aa12.7□□□□□ -0.38
CHMP1B-202ENST00000588284 KBTBD3Q8NAB2 608 aa12.7□□□□□ -0.38
CHMP1B-202ENST00000588284 ANO8Q9HCE9 1232 aaPredicted RBP12.7□□□□□ -0.38
CHMP1B-202ENST00000588284 RFX7Q2KHR2 1363 aa12.69□□□□□ -0.38
CHMP1B-202ENST00000588284 SGSM2O43147 1006 aa12.69□□□□□ -0.38
CHMP1B-202ENST00000588284 KCNJ4P48050 445 aa12.69□□□□□ -0.38
CHMP1B-202ENST00000588284 CCDC102BQ68D86 513 aa12.69□□□□□ -0.38
CHMP1B-202ENST00000588284 ZSCAN25Q6NSZ9 544 aa12.69□□□□□ -0.38
CHMP1B-202ENST00000588284 KLHL34Q8N239 644 aa12.69□□□□□ -0.38
CHMP1B-202ENST00000588284 IL27Q8NEV9 243 aa12.69□□□□□ -0.38
CHMP1B-202ENST00000588284 IPO9Q96P70 1041 aaKnown RBP12.69□□□□□ -0.38
CHMP1B-202ENST00000588284 LEMD3Q9Y2U8 911 aa12.69□□□□□ -0.38
CHMP1B-202ENST00000588284 RAD50Q92878 1312 aa12.68□□□□□ -0.38
CHMP1B-202ENST00000588284 GOLIM4O00461 696 aa12.68□□□□□ -0.38
CHMP1B-202ENST00000588284 ZFYP08048 801 aaPredicted RBP12.68□□□□□ -0.38
CHMP1B-202ENST00000588284 NPR1P16066 1061 aa12.68□□□□□ -0.38
CHMP1B-202ENST00000588284 ARID4AP29374 1257 aaPredicted RBP12.68□□□□□ -0.38
CHMP1B-202ENST00000588284 FKBP4Q02790 459 aaKnown RBP eCLIP12.68□□□□□ -0.38
CHMP1B-202ENST00000588284 CWC27Q6UX04 472 aaKnown RBP12.68□□□□□ -0.38
CHMP1B-202ENST00000588284 IFNLR1Q8IU57 520 aaPredicted RBP12.68□□□□□ -0.38
CHMP1B-202ENST00000588284 PIP4P2Q8N4L2 257 aa12.68□□□□□ -0.38
CHMP1B-202ENST00000588284 TMX4Q9H1E5 349 aaPredicted RBP12.68□□□□□ -0.38
CHMP1B-202ENST00000588284 DAXXQ9UER7 740 aaPredicted RBP12.68□□□□□ -0.38
CHMP1B-202ENST00000588284 LRP5O75197 1615 aa12.68□□□□□ -0.38
CHMP1B-202ENST00000588284 PRKAR2AP13861 404 aaKnown RBP12.67□□□□□ -0.38
CHMP1B-202ENST00000588284 ATP2B4P23634 1241 aa12.67□□□□□ -0.38
CHMP1B-202ENST00000588284 BECN1Q14457 450 aa12.67□□□□□ -0.38
CHMP1B-202ENST00000588284 MASTLQ96GX5 879 aa12.67□□□□□ -0.38
CHMP1B-202ENST00000588284 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.67□□□□□ -0.38
CHMP1B-202ENST00000588284 ANO2Q9NQ90 1003 aa12.67□□□□□ -0.38
CHMP1B-202ENST00000588284 HELLSQ9NRZ9 838 aa12.67□□□□□ -0.38
CHMP1B-202ENST00000588284 H0YIN7 160 aa12.66□□□□□ -0.38
CHMP1B-202ENST00000588284 SEMA3EO15041 775 aa12.66□□□□□ -0.38
CHMP1B-202ENST00000588284 RNF113AO15541 343 aaKnown RBP12.66□□□□□ -0.38
CHMP1B-202ENST00000588284 SRGNP10124 158 aa12.66□□□□□ -0.38
CHMP1B-202ENST00000588284 ZAP70P43403 619 aa12.66□□□□□ -0.38
CHMP1B-202ENST00000588284 PHKA1P46020 1223 aa12.66□□□□□ -0.38
CHMP1B-202ENST00000588284 MSL1Q68DK7 614 aa12.66□□□□□ -0.38
CHMP1B-202ENST00000588284 VPS37DQ86XT2 251 aa12.66□□□□□ -0.38
CHMP1B-202ENST00000588284 SP8Q8IXZ3 490 aa12.66□□□□□ -0.38
CHMP1B-202ENST00000588284 SNRKQ9NRH2 765 aa12.66□□□□□ -0.38
CHMP1B-202ENST00000588284 ANKIB1Q9P2G1 1089 aa12.66□□□□□ -0.38
CHMP1B-202ENST00000588284 ZNF804BA4D1E1 1349 aa12.65□□□□□ -0.38
CHMP1B-202ENST00000588284 XDHP47989 1333 aa12.65□□□□□ -0.38
CHMP1B-202ENST00000588284 TUBGCP6Q96RT7 1819 aa12.65□□□□□ -0.38
CHMP1B-202ENST00000588284 IGSF3O75054 1194 aa12.65□□□□□ -0.38
CHMP1B-202ENST00000588284 BCAMP50895 628 aa12.65□□□□□ -0.38
CHMP1B-202ENST00000588284 ANAPC15P60006 121 aa12.65□□□□□ -0.38
CHMP1B-202ENST00000588284 NMIQ13287 307 aaPredicted RBP12.65□□□□□ -0.38
CHMP1B-202ENST00000588284 MCMDC2Q4G0Z9 681 aa12.65□□□□□ -0.38
CHMP1B-202ENST00000588284 FBXO33Q7Z6M2 555 aa12.65□□□□□ -0.38
CHMP1B-202ENST00000588284 SPATA5Q8NB90 893 aa12.65□□□□□ -0.38
CHMP1B-202ENST00000588284 EDC3Q96F86 508 aaKnown RBP12.65□□□□□ -0.38
CHMP1B-202ENST00000588284 DENND2AQ9ULE3 1009 aa12.65□□□□□ -0.38
CHMP1B-202ENST00000588284 QSER1Q2KHR3 1735 aa12.65□□□□□ -0.38
CHMP1B-202ENST00000588284 HIBADHP31937 336 aaKnown RBP12.64□□□□□ -0.39
CHMP1B-202ENST00000588284 MCAMP43121 646 aa12.64□□□□□ -0.39
CHMP1B-202ENST00000588284 STYK1Q6J9G0 422 aa12.64□□□□□ -0.39
CHMP1B-202ENST00000588284 CHADLQ6NUI6 762 aa12.64□□□□□ -0.39
CHMP1B-202ENST00000588284 C15orf52Q6ZUT6 534 aaKnown RBP12.64□□□□□ -0.39
CHMP1B-202ENST00000588284 FAM84BQ96KN1 310 aaPredicted RBP12.64□□□□□ -0.39
CHMP1B-202ENST00000588284 PODXL2Q9NZ53 605 aa12.64□□□□□ -0.39
CHMP1B-202ENST00000588284 HMG20BQ9P0W2 317 aa12.64□□□□□ -0.39
CHMP1B-202ENST00000588284 AK9Q5TCS8 1911 aa12.64□□□□□ -0.39
CHMP1B-202ENST00000588284 SPEF2Q9C093 1822 aa12.63□□□□□ -0.39
CHMP1B-202ENST00000588284 SNAP23O00161 211 aa12.63□□□□□ -0.39
CHMP1B-202ENST00000588284 MAP3K12Q12852 859 aa12.63□□□□□ -0.39
CHMP1B-202ENST00000588284 SCARF1Q14162 830 aa12.63□□□□□ -0.39
CHMP1B-202ENST00000588284 RABEP1Q15276 862 aa12.63□□□□□ -0.39
CHMP1B-202ENST00000588284 WASHC4Q2M389 1173 aa12.63□□□□□ -0.39
CHMP1B-202ENST00000588284 ZMYM1Q5SVZ6 1142 aa12.63□□□□□ -0.39
CHMP1B-202ENST00000588284 C2CD5Q86YS7 1000 aa12.63□□□□□ -0.39
CHMP1B-202ENST00000588284 CNKSR1Q969H4 720 aa12.63□□□□□ -0.39
CHMP1B-202ENST00000588284 FAM227BQ96M60 508 aa12.63□□□□□ -0.39
CHMP1B-202ENST00000588284 LSG1Q9H089 658 aaKnown RBP12.63□□□□□ -0.39
CHMP1B-202ENST00000588284 ANTXR1Q9H6X2 564 aa12.63□□□□□ -0.39
CHMP1B-202ENST00000588284 GGA1Q9UJY5 639 aa12.63□□□□□ -0.39
CHMP1B-202ENST00000588284 NSFL1CQ9UNZ2 370 aaKnown RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms