RNA–Protein interactions for RNA: ENST00000588275.2

LINC01842-201, Transcript of long intergenic non-protein coding RNA 1842, humanhuman

TSL 1 (best) BASIC

Gene LINC01842, Length 768 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01842-201ENST00000588275 SCAF8Q9UPN6 1271 aaKnown RBP21.52■■□□□ 1.04
LINC01842-201ENST00000588275 IGHMBP2P38935 993 aaKnown RBP21.51■■□□□ 1.03
LINC01842-201ENST00000588275 CCT4P50991 539 aaKnown RBP21.51■■□□□ 1.03
LINC01842-201ENST00000588275 GMLQ99445 158 aa21.51■■□□□ 1.03
LINC01842-201ENST00000588275 MXD3Q9BW11 206 aa21.51■■□□□ 1.03
LINC01842-201ENST00000588275 FLIIQ13045 1269 aa21.5■■□□□ 1.03
LINC01842-201ENST00000588275 FKBP5Q13451 457 aaPredicted RBP21.5■■□□□ 1.03
LINC01842-201ENST00000588275 SALL2Q9Y467 1007 aaPredicted RBP21.5■■□□□ 1.03
LINC01842-201ENST00000588275 SLC10A3P09131 477 aa21.49■■□□□ 1.03
LINC01842-201ENST00000588275 AKAP11Q9UKA4 1901 aa21.49■■□□□ 1.03
LINC01842-201ENST00000588275 H7C1W4 665 aa21.48■■□□□ 1.03
LINC01842-201ENST00000588275 TRPA1O75762 1119 aa21.48■■□□□ 1.03
LINC01842-201ENST00000588275 ITGA6P23229 1130 aa21.48■■□□□ 1.03
LINC01842-201ENST00000588275 GCKRQ14397 625 aa21.48■■□□□ 1.03
LINC01842-201ENST00000588275 MYH16Q9H6N6 1097 aa21.48■■□□□ 1.03
LINC01842-201ENST00000588275 MRS2Q9HD23 443 aa21.48■■□□□ 1.03
LINC01842-201ENST00000588275 FANCIQ9NVI1 1328 aa21.48■■□□□ 1.03
LINC01842-201ENST00000588275 PAPPA2Q9BXP8 1791 aa21.48■■□□□ 1.03
LINC01842-201ENST00000588275 NBPF9Q3BBW0 867 aa21.47■■□□□ 1.03
LINC01842-201ENST00000588275 DACT2Q5SW24 774 aa21.47■■□□□ 1.03
LINC01842-201ENST00000588275 OGFOD1Q8N543 542 aa21.47■■□□□ 1.03
LINC01842-201ENST00000588275 DNAAF4Q8WXU2 420 aa21.47■■□□□ 1.03
LINC01842-201ENST00000588275 MPHOSPH8Q99549 860 aa21.47■■□□□ 1.03
LINC01842-201ENST00000588275 SAGE1Q9NXZ1 904 aa21.47■■□□□ 1.03
LINC01842-201ENST00000588275 IL16Q14005 1332 aa21.47■■□□□ 1.03
LINC01842-201ENST00000588275 PITPNM2Q9BZ72 1349 aa21.47■■□□□ 1.03
LINC01842-201ENST00000588275 ZNF646O15015 1829 aaPredicted RBP21.46■■□□□ 1.03
LINC01842-201ENST00000588275 KCNJ4P48050 445 aa21.46■■□□□ 1.03
LINC01842-201ENST00000588275 PRAMEF18Q5VWM3 479 aa21.46■■□□□ 1.03
LINC01842-201ENST00000588275 MOB2Q70IA6 237 aa21.46■■□□□ 1.03
LINC01842-201ENST00000588275 TXNRD3Q86VQ6 643 aa21.46■■□□□ 1.03
LINC01842-201ENST00000588275 RASAL3Q86YV0 1011 aa21.46■■□□□ 1.03
LINC01842-201ENST00000588275 COA1Q9GZY4 146 aa21.46■■□□□ 1.03
LINC01842-201ENST00000588275 RNF186Q9NXI6 227 aa21.46■■□□□ 1.03
LINC01842-201ENST00000588275 LEMD3Q9Y2U8 911 aa21.46■■□□□ 1.03
LINC01842-201ENST00000588275 ZNF804BA4D1E1 1349 aa21.46■■□□□ 1.03
LINC01842-201ENST00000588275 KLRK1P26718 216 aa21.45■■□□□ 1.02
LINC01842-201ENST00000588275 MLLT1Q03111 559 aaPredicted RBP21.45■■□□□ 1.02
LINC01842-201ENST00000588275 TTLL12Q14166 644 aaPredicted RBP21.45■■□□□ 1.02
LINC01842-201ENST00000588275 ANKRD2Q9GZV1 360 aa21.45■■□□□ 1.02
LINC01842-201ENST00000588275 MYO3BQ8WXR4 1341 aa21.45■■□□□ 1.02
LINC01842-201ENST00000588275 SASH1O94885 1247 aa21.44■■□□□ 1.02
LINC01842-201ENST00000588275 FKBP1BP68106 108 aa21.44■■□□□ 1.02
LINC01842-201ENST00000588275 STRIP1Q5VSL9 837 aa21.44■■□□□ 1.02
LINC01842-201ENST00000588275 CSRNP1Q96S65 589 aa21.44■■□□□ 1.02
LINC01842-201ENST00000588275 PLA2G12BQ9BX93 195 aa21.44■■□□□ 1.02
LINC01842-201ENST00000588275 LINS1Q8NG48 757 aa21.43■■□□□ 1.02
LINC01842-201ENST00000588275 CHMP3Q9Y3E7 222 aa21.43■■□□□ 1.02
LINC01842-201ENST00000588275 CACNA1FO60840 1977 aa21.43■■□□□ 1.02
LINC01842-201ENST00000588275 UBE2Q2LH0YL09 131 aa21.42■■□□□ 1.02
LINC01842-201ENST00000588275 WNT10BO00744 389 aa21.42■■□□□ 1.02
LINC01842-201ENST00000588275 CASP7P55210 303 aa21.42■■□□□ 1.02
LINC01842-201ENST00000588275 CHRNDQ07001 517 aa21.42■■□□□ 1.02
LINC01842-201ENST00000588275 TTLL5Q6EMB2 1281 aa21.42■■□□□ 1.02
LINC01842-201ENST00000588275 KIAA0825Q8IV33 1275 aa21.42■■□□□ 1.02
LINC01842-201ENST00000588275 ANKRD18BA2A2Z9 1011 aa21.41■■□□□ 1.02
LINC01842-201ENST00000588275 NF2P35240 595 aa21.41■■□□□ 1.02
LINC01842-201ENST00000588275 GTF2IP78347 998 aa21.41■■□□□ 1.02
LINC01842-201ENST00000588275 EXOSC9Q06265 439 aaKnown RBP21.41■■□□□ 1.02
LINC01842-201ENST00000588275 HDAC9Q9UKV0 1011 aa21.41■■□□□ 1.02
LINC01842-201ENST00000588275 CSF1RP07333 972 aa21.4■■□□□ 1.02
LINC01842-201ENST00000588275 F6X3S4 739 aa21.39■■□□□ 1.01
LINC01842-201ENST00000588275 SNAP23O00161 211 aa21.39■■□□□ 1.01
LINC01842-201ENST00000588275 ANP32CO43423 234 aa21.39■■□□□ 1.01
LINC01842-201ENST00000588275 VAMP4O75379 141 aa21.39■■□□□ 1.01
LINC01842-201ENST00000588275 TAF5LO75529 589 aa21.39■■□□□ 1.01
LINC01842-201ENST00000588275 PRKG1Q13976 671 aa21.39■■□□□ 1.01
LINC01842-201ENST00000588275 HELBQ8NG08 1087 aaPredicted RBP21.39■■□□□ 1.01
LINC01842-201ENST00000588275 RGS19P49795 217 aa21.38■■□□□ 1.01
LINC01842-201ENST00000588275 MKRN3Q13064 507 aaKnown RBP21.38■■□□□ 1.01
LINC01842-201ENST00000588275 WDR63Q8IWG1 891 aa21.38■■□□□ 1.01
LINC01842-201ENST00000588275 REM2Q8IYK8 340 aaPredicted RBP21.38■■□□□ 1.01
LINC01842-201ENST00000588275 IFIT5Q13325 482 aaKnown RBP21.37■■□□□ 1.01
LINC01842-201ENST00000588275 NCBP3Q53F19 620 aaKnown RBP21.37■■□□□ 1.01
LINC01842-201ENST00000588275 APOBEC3FQ8IUX4 373 aaKnown RBP21.37■■□□□ 1.01
LINC01842-201ENST00000588275 CD209Q9NNX6 404 aa21.37■■□□□ 1.01
LINC01842-201ENST00000588275 A0A1B0GUL6 1792 aa21.37■■□□□ 1.01
LINC01842-201ENST00000588275 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.36■■□□□ 1.01
LINC01842-201ENST00000588275 F8W031 263 aaPredicted RBP21.35■■□□□ 1.01
LINC01842-201ENST00000588275 FOXO4P98177 505 aa21.35■■□□□ 1.01
LINC01842-201ENST00000588275 TAF7LQ5H9L4 462 aa21.35■■□□□ 1.01
LINC01842-201ENST00000588275 PLIN1O60240 522 aa21.34■■□□□ 1.01
LINC01842-201ENST00000588275 MMP14P50281 582 aa21.34■■□□□ 1.01
LINC01842-201ENST00000588275 BEND3Q5T5X7 828 aa21.34■■□□□ 1.01
LINC01842-201ENST00000588275 ARMC9Q7Z3E5 817 aa21.34■■□□□ 1.01
LINC01842-201ENST00000588275 CTU1Q7Z7A3 348 aaKnown RBP21.34■■□□□ 1.01
LINC01842-201ENST00000588275 JAG2Q9Y219 1238 aa21.34■■□□□ 1.01
LINC01842-201ENST00000588275 TBC1D8O95759 1140 aa21.33■■□□□ 1.01
LINC01842-201ENST00000588275 SOX10P56693 466 aa21.33■■□□□ 1.01
LINC01842-201ENST00000588275 DLGAP5Q15398 846 aa21.33■■□□□ 1.01
LINC01842-201ENST00000588275 LMBR1LQ6UX01 489 aa21.33■■□□□ 1.01
LINC01842-201ENST00000588275 ZNF804AQ7Z570 1209 aa21.33■■□□□ 1.01
LINC01842-201ENST00000588275 ZNF594Q96JF6 807 aaPredicted RBP21.33■■□□□ 1.01
LINC01842-201ENST00000588275 SPINK5Q9NQ38 1064 aaPredicted RBP21.33■■□□□ 1.01
LINC01842-201ENST00000588275 PTPN12Q05209 780 aaKnown RBP21.32■■□□□ 1
LINC01842-201ENST00000588275 CCDC57Q2TAC2 916 aa21.32■■□□□ 1
LINC01842-201ENST00000588275 SLC4A10Q6U841 1118 aa21.32■■□□□ 1
LINC01842-201ENST00000588275 CERS5Q8N5B7 392 aa21.32■■□□□ 1
LINC01842-201ENST00000588275 CNNM1Q9NRU3 951 aa21.32■■□□□ 1
LINC01842-201ENST00000588275 ANGEL1Q9UNK9 670 aaKnown RBP21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 105.6 ms