RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 AK9Q5TCS8 1911 aa13.8□□□□□ -0.2
VMP1-207ENST00000588131 PHKA1P46020 1223 aa13.79□□□□□ -0.2
VMP1-207ENST00000588131 SCARF1Q14162 830 aa13.79□□□□□ -0.2
VMP1-207ENST00000588131 CCDC158Q5M9N0 1113 aa13.79□□□□□ -0.2
VMP1-207ENST00000588131 CCDC102BQ68D86 513 aa13.79□□□□□ -0.2
VMP1-207ENST00000588131 OLFM4Q6UX06 510 aa13.79□□□□□ -0.2
VMP1-207ENST00000588131 TMC4Q7Z404 712 aa13.79□□□□□ -0.2
VMP1-207ENST00000588131 SP8Q8IXZ3 490 aa13.79□□□□□ -0.2
VMP1-207ENST00000588131 RILPL2Q969X0 211 aa13.79□□□□□ -0.2
VMP1-207ENST00000588131 EDC3Q96F86 508 aaKnown RBP13.79□□□□□ -0.2
VMP1-207ENST00000588131 ATP6V0A2Q9Y487 856 aa13.79□□□□□ -0.2
VMP1-207ENST00000588131 NDUFB9Q9Y6M9 179 aa13.79□□□□□ -0.2
VMP1-207ENST00000588131 XDHP47989 1333 aa13.79□□□□□ -0.2
VMP1-207ENST00000588131 IRS2Q9Y4H2 1338 aa13.79□□□□□ -0.2
VMP1-207ENST00000588131 DUOX1Q9NRD9 1551 aa13.79□□□□□ -0.2
VMP1-207ENST00000588131 A0A0G2JLW4 131 aa13.78□□□□□ -0.2
VMP1-207ENST00000588131 CDC45O75419 566 aa13.78□□□□□ -0.2
VMP1-207ENST00000588131 DPEP1P16444 411 aa13.78□□□□□ -0.2
VMP1-207ENST00000588131 KCNJ4P48050 445 aa13.78□□□□□ -0.2
VMP1-207ENST00000588131 PRPF40BQ6NWY9 871 aaKnown RBP13.78□□□□□ -0.2
VMP1-207ENST00000588131 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.78□□□□□ -0.2
VMP1-207ENST00000588131 DNAJC2Q99543 621 aaKnown RBP13.78□□□□□ -0.2
VMP1-207ENST00000588131 HAUS7Q99871 368 aa13.78□□□□□ -0.2
VMP1-207ENST00000588131 ANKIB1Q9P2G1 1089 aa13.78□□□□□ -0.2
VMP1-207ENST00000588131 ZNF804BA4D1E1 1349 aa13.78□□□□□ -0.2
VMP1-207ENST00000588131 AKAP11Q9UKA4 1901 aa13.78□□□□□ -0.2
VMP1-207ENST00000588131 KCNA3P22001 575 aa13.77□□□□□ -0.21
VMP1-207ENST00000588131 ARID4AP29374 1257 aaPredicted RBP13.77□□□□□ -0.21
VMP1-207ENST00000588131 GYG1P46976 350 aa13.77□□□□□ -0.21
VMP1-207ENST00000588131 BCAMP50895 628 aa13.77□□□□□ -0.21
VMP1-207ENST00000588131 TBC1D9Q6ZT07 1266 aa13.77□□□□□ -0.21
VMP1-207ENST00000588131 CNTROBQ8N137 903 aa13.77□□□□□ -0.21
VMP1-207ENST00000588131 CNKSR1Q969H4 720 aa13.77□□□□□ -0.21
VMP1-207ENST00000588131 ZNF512BQ96KM6 892 aaPredicted RBP13.77□□□□□ -0.21
VMP1-207ENST00000588131 GPR101Q96P66 508 aaPredicted RBP13.77□□□□□ -0.21
VMP1-207ENST00000588131 PODXL2Q9NZ53 605 aa13.77□□□□□ -0.21
VMP1-207ENST00000588131 NSFL1CQ9UNZ2 370 aaKnown RBP13.77□□□□□ -0.21
VMP1-207ENST00000588131 LEMD3Q9Y2U8 911 aa13.77□□□□□ -0.21
VMP1-207ENST00000588131 UFL1O94874 794 aa13.76□□□□□ -0.21
VMP1-207ENST00000588131 SEC24BO95487 1268 aa13.76□□□□□ -0.21
VMP1-207ENST00000588131 ATP2B4P23634 1241 aa13.76□□□□□ -0.21
VMP1-207ENST00000588131 MCAMP43121 646 aa13.76□□□□□ -0.21
VMP1-207ENST00000588131 PI16Q6UXB8 463 aa13.76□□□□□ -0.21
VMP1-207ENST00000588131 TXNRD3Q86VQ6 643 aa13.76□□□□□ -0.21
VMP1-207ENST00000588131 EVI5LQ96CN4 794 aa13.76□□□□□ -0.21
VMP1-207ENST00000588131 FAM84BQ96KN1 310 aaPredicted RBP13.76□□□□□ -0.21
VMP1-207ENST00000588131 SNRKQ9NRH2 765 aa13.76□□□□□ -0.21
VMP1-207ENST00000588131 ZNF219Q9P2Y4 722 aaPredicted RBP13.76□□□□□ -0.21
VMP1-207ENST00000588131 COL1A1P02452 1464 aaPredicted RBP13.75□□□□□ -0.21
VMP1-207ENST00000588131 UQCRFS1P1P0C7P4 283 aa13.75□□□□□ -0.21
VMP1-207ENST00000588131 ZAP70P43403 619 aa13.75□□□□□ -0.21
VMP1-207ENST00000588131 TGFB2P61812 414 aa13.75□□□□□ -0.21
VMP1-207ENST00000588131 KLHL34Q8N239 644 aa13.75□□□□□ -0.21
VMP1-207ENST00000588131 TBC1D16Q8TBP0 767 aa13.75□□□□□ -0.21
VMP1-207ENST00000588131 C7orf43Q8WVR3 580 aa13.75□□□□□ -0.21
VMP1-207ENST00000588131 ANTXR1Q9H6X2 564 aa13.75□□□□□ -0.21
VMP1-207ENST00000588131 TSHZ2Q9NRE2 1034 aa13.75□□□□□ -0.21
VMP1-207ENST00000588131 POLLQ9UGP5 575 aa13.75□□□□□ -0.21
VMP1-207ENST00000588131 GGA1Q9UJY5 639 aa13.75□□□□□ -0.21
VMP1-207ENST00000588131 BRCA1P38398 1863 aaKnown RBP13.75□□□□□ -0.21
VMP1-207ENST00000588131 SNED1Q8TER0 1413 aa13.74□□□□□ -0.21
VMP1-207ENST00000588131 GOLIM4O00461 696 aa13.74□□□□□ -0.21
VMP1-207ENST00000588131 CHMLP26374 656 aa13.74□□□□□ -0.21
VMP1-207ENST00000588131 RASGRF1Q13972 1273 aa13.74□□□□□ -0.21
VMP1-207ENST00000588131 FBXO33Q7Z6M2 555 aa13.74□□□□□ -0.21
VMP1-207ENST00000588131 SPON1Q9HCB6 807 aa13.74□□□□□ -0.21
VMP1-207ENST00000588131 PAG1Q9NWQ8 432 aa13.74□□□□□ -0.21
VMP1-207ENST00000588131 HMG20BQ9P0W2 317 aa13.74□□□□□ -0.21
VMP1-207ENST00000588131 PPP1R1BQ9UD71 204 aaPredicted RBP13.74□□□□□ -0.21
VMP1-207ENST00000588131 IQSEC3Q9UPP2 1182 aaPredicted RBP13.74□□□□□ -0.21
VMP1-207ENST00000588131 CD2APQ9Y5K6 639 aa13.74□□□□□ -0.21
VMP1-207ENST00000588131 FKBP4Q02790 459 aaKnown RBP eCLIP13.73□□□□□ -0.21
VMP1-207ENST00000588131 CAVIN4Q5BKX8 364 aa13.73□□□□□ -0.21
VMP1-207ENST00000588131 DPP8Q6V1X1 898 aaPredicted RBP13.73□□□□□ -0.21
VMP1-207ENST00000588131 C15orf52Q6ZUT6 534 aaKnown RBP13.73□□□□□ -0.21
VMP1-207ENST00000588131 MPNDQ8N594 471 aa13.73□□□□□ -0.21
VMP1-207ENST00000588131 TTLL6Q8N841 843 aa13.73□□□□□ -0.21
VMP1-207ENST00000588131 FSD1Q9BTV5 496 aa13.73□□□□□ -0.21
VMP1-207ENST00000588131 MYH13Q9UKX3 1938 aa13.72□□□□□ -0.21
VMP1-207ENST00000588131 MED23Q9ULK4 1368 aa13.72□□□□□ -0.21
VMP1-207ENST00000588131 DOCK2Q92608 1830 aa13.72□□□□□ -0.21
VMP1-207ENST00000588131 C6orf229H3BNL8 230 aa13.72□□□□□ -0.21
VMP1-207ENST00000588131 CYP2E1P05181 493 aaPredicted RBP13.72□□□□□ -0.21
VMP1-207ENST00000588131 HIBADHP31937 336 aaKnown RBP13.72□□□□□ -0.21
VMP1-207ENST00000588131 KBTBD3Q8NAB2 608 aa13.72□□□□□ -0.21
VMP1-207ENST00000588131 SPATA5Q8NB90 893 aa13.72□□□□□ -0.21
VMP1-207ENST00000588131 WWC3Q9ULE0 1092 aa13.72□□□□□ -0.21
VMP1-207ENST00000588131 MYO5AQ9Y4I1 1855 aaKnown RBP13.72□□□□□ -0.21
VMP1-207ENST00000588131 RFX7Q2KHR2 1363 aa13.71□□□□□ -0.21
VMP1-207ENST00000588131 C21orf2O43822 256 aa13.71□□□□□ -0.21
VMP1-207ENST00000588131 CHGBP05060 677 aa13.71□□□□□ -0.21
VMP1-207ENST00000588131 VPS37DQ86XT2 251 aa13.71□□□□□ -0.21
VMP1-207ENST00000588131 TMX4Q9H1E5 349 aaPredicted RBP13.71□□□□□ -0.21
VMP1-207ENST00000588131 IL25Q9H293 177 aa13.71□□□□□ -0.21
VMP1-207ENST00000588131 PIH1D3Q9NQM4 214 aaKnown RBP13.71□□□□□ -0.21
VMP1-207ENST00000588131 GNL3LQ9NVN8 582 aaKnown RBP13.71□□□□□ -0.21
VMP1-207ENST00000588131 PIM2Q9P1W9 311 aa13.71□□□□□ -0.21
VMP1-207ENST00000588131 RIMBP2O15034 1052 aa13.7□□□□□ -0.22
VMP1-207ENST00000588131 MFAP1P55081 439 aaKnown RBP13.7□□□□□ -0.22
VMP1-207ENST00000588131 CC2D2BQ6DHV5 1058 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms