RNA–Protein interactions for RNA: ENST00000587987.5

U2AF1L4-208, Transcript of U2 small nuclear RNA auxiliary factor 1 like 4, human

TSL 1 (best)

Gene U2AF1L4, Length 1,036 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
U2AF1L4-208	ENST00000587987	IFIT5	Q13325	482 aa	Known RBP	11.77	□□□□□ -0.53
U2AF1L4-208	ENST00000587987	CIAPIN1	Q6FI81	312 aa		11.77	□□□□□ -0.53
U2AF1L4-208	ENST00000587987	C3orf67	Q6ZVT6	689 aa		11.77	□□□□□ -0.53
U2AF1L4-208	ENST00000587987	CRAMP1	Q96RY5	1269 aa		11.77	□□□□□ -0.53
U2AF1L4-208	ENST00000587987	CDC5L	Q99459	802 aa	Known RBP	11.77	□□□□□ -0.53
U2AF1L4-208	ENST00000587987	TMX4	Q9H1E5	349 aa	Predicted RBP	11.77	□□□□□ -0.53
U2AF1L4-208	ENST00000587987	FBXO3	Q9UK99	471 aa		11.77	□□□□□ -0.53
U2AF1L4-208	ENST00000587987	PDE4DIP	Q5VU43	2346 aa		11.77	□□□□□ -0.53
U2AF1L4-208	ENST00000587987	SRGAP3	O43295	1099 aa		11.76	□□□□□ -0.53
U2AF1L4-208	ENST00000587987	BBOX1	O75936	387 aa		11.76	□□□□□ -0.53
U2AF1L4-208	ENST00000587987	CEP85	Q6P2H3	762 aa		11.76	□□□□□ -0.53
U2AF1L4-208	ENST00000587987	TMC4	Q7Z404	712 aa		11.76	□□□□□ -0.53
U2AF1L4-208	ENST00000587987	SSH3	Q8TE77	659 aa		11.76	□□□□□ -0.53
U2AF1L4-208	ENST00000587987	RWDD1	Q9H446	243 aa	Predicted RBP	11.76	□□□□□ -0.53
U2AF1L4-208	ENST00000587987	ZNRF3	Q9ULT6	936 aa		11.76	□□□□□ -0.53
U2AF1L4-208	ENST00000587987	CHMP3	Q9Y3E7	222 aa		11.76	□□□□□ -0.53
U2AF1L4-208	ENST00000587987	LAMB2	P55268	1798 aa		11.75	□□□□□ -0.53
U2AF1L4-208	ENST00000587987	IGHMBP2	P38935	993 aa	Known RBP	11.75	□□□□□ -0.53
U2AF1L4-208	ENST00000587987	CXCL9	Q07325	125 aa		11.75	□□□□□ -0.53
U2AF1L4-208	ENST00000587987	HDAC1	Q13547	482 aa	Predicted RBP	11.75	□□□□□ -0.53
U2AF1L4-208	ENST00000587987	HSP90AB4P	Q58FF6	505 aa		11.75	□□□□□ -0.53
U2AF1L4-208	ENST00000587987	TAF7L	Q5H9L4	462 aa		11.75	□□□□□ -0.53
U2AF1L4-208	ENST00000587987	EPHA10	Q5JZY3	1008 aa		11.75	□□□□□ -0.53
U2AF1L4-208	ENST00000587987	HHIPL1	Q96JK4	782 aa		11.75	□□□□□ -0.53
U2AF1L4-208	ENST00000587987	MYH3	P11055	1940 aa		11.75	□□□□□ -0.53
U2AF1L4-208	ENST00000587987	RAD17	O75943	681 aa		11.74	□□□□□ -0.53
U2AF1L4-208	ENST00000587987	ITGA6	P23229	1130 aa		11.74	□□□□□ -0.53
U2AF1L4-208	ENST00000587987	POLA2	Q14181	598 aa		11.74	□□□□□ -0.53
U2AF1L4-208	ENST00000587987	ANKRD18A	Q8IVF6	992 aa		11.74	□□□□□ -0.53
U2AF1L4-208	ENST00000587987	SUPT20H	Q8NEM7	779 aa		11.74	□□□□□ -0.53
U2AF1L4-208	ENST00000587987	TRPM4	Q8TD43	1214 aa		11.74	□□□□□ -0.53
U2AF1L4-208	ENST00000587987	ZIC5	Q96T25	663 aa		11.74	□□□□□ -0.53
U2AF1L4-208	ENST00000587987	GREM2	Q9H772	168 aa		11.74	□□□□□ -0.53
U2AF1L4-208	ENST00000587987	C1orf115	Q9H7X2	142 aa		11.74	□□□□□ -0.53
U2AF1L4-208	ENST00000587987	COPRS	Q9NQ92	184 aa		11.74	□□□□□ -0.53
U2AF1L4-208	ENST00000587987	ATP6V0A2	Q9Y487	856 aa		11.74	□□□□□ -0.53
U2AF1L4-208	ENST00000587987	DDX60	Q8IY21	1712 aa	Known RBP	11.74	□□□□□ -0.53
U2AF1L4-208	ENST00000587987	SOX10	P56693	466 aa		11.73	□□□□□ -0.53
U2AF1L4-208	ENST00000587987	HUNK	P57058	714 aa		11.73	□□□□□ -0.53
U2AF1L4-208	ENST00000587987	RPS8	P62241	208 aa	Known RBP	11.73	□□□□□ -0.53
U2AF1L4-208	ENST00000587987	NOG	Q13253	232 aa		11.73	□□□□□ -0.53
U2AF1L4-208	ENST00000587987	GRAP	Q13588	217 aa		11.73	□□□□□ -0.53
U2AF1L4-208	ENST00000587987	DPP8	Q6V1X1	898 aa	Predicted RBP	11.73	□□□□□ -0.53
U2AF1L4-208	ENST00000587987	GRAPL	Q8TC17	118 aa	Predicted RBP	11.73	□□□□□ -0.53
U2AF1L4-208	ENST00000587987	MPHOSPH8	Q99549	860 aa		11.73	□□□□□ -0.53
U2AF1L4-208	ENST00000587987	BSDC1	Q9NW68	430 aa	Predicted RBP	11.73	□□□□□ -0.53
U2AF1L4-208	ENST00000587987	PPP4R2	Q9NY27	417 aa		11.73	□□□□□ -0.53
U2AF1L4-208	ENST00000587987	PCDHB15	Q9Y5E8	787 aa		11.73	□□□□□ -0.53
U2AF1L4-208	ENST00000587987	PNMA6E	A0A0J9YXQ4	647 aa		11.72	□□□□□ -0.53
U2AF1L4-208	ENST00000587987	SHTN1	A0MZ66	631 aa		11.72	□□□□□ -0.53
U2AF1L4-208	ENST00000587987	RAB11FIP3	O75154	756 aa		11.72	□□□□□ -0.53
U2AF1L4-208	ENST00000587987	CIAO1	O76071	339 aa		11.72	□□□□□ -0.53
U2AF1L4-208	ENST00000587987	RFX5	P48382	616 aa	Predicted RBP	11.72	□□□□□ -0.53
U2AF1L4-208	ENST00000587987	HIRA	P54198	1017 aa	Predicted RBP	11.72	□□□□□ -0.53
U2AF1L4-208	ENST00000587987	PTPN12	Q05209	780 aa	Known RBP	11.72	□□□□□ -0.53
U2AF1L4-208	ENST00000587987	G3BP1	Q13283	466 aa	Known RBP eCLIP	11.72	□□□□□ -0.53
U2AF1L4-208	ENST00000587987	LDHAL6A	Q6ZMR3	332 aa		11.72	□□□□□ -0.53
U2AF1L4-208	ENST00000587987	CDC37L1	Q7L3B6	337 aa		11.72	□□□□□ -0.53
U2AF1L4-208	ENST00000587987	USP48	Q86UV5	1035 aa		11.72	□□□□□ -0.53
U2AF1L4-208	ENST00000587987	GCC1	Q96CN9	775 aa		11.72	□□□□□ -0.53
U2AF1L4-208	ENST00000587987	VPS33B	Q9H267	617 aa		11.72	□□□□□ -0.53
U2AF1L4-208	ENST00000587987	PGAP2	Q9UHJ9	254 aa		11.72	□□□□□ -0.53
U2AF1L4-208	ENST00000587987	NOP58	Q9Y2X3	529 aa	Known RBP	11.72	□□□□□ -0.53
U2AF1L4-208	ENST00000587987	TNRC18	O15417	2968 aa	Predicted RBP	11.72	□□□□□ -0.53
U2AF1L4-208	ENST00000587987	IL15	P40933	162 aa	Predicted RBP	11.71	□□□□□ -0.53
U2AF1L4-208	ENST00000587987	TNIP1	Q15025	636 aa		11.71	□□□□□ -0.53
U2AF1L4-208	ENST00000587987	DLK2	Q6UY11	383 aa		11.71	□□□□□ -0.53
U2AF1L4-208	ENST00000587987	ERC1	Q8IUD2	1116 aa		11.71	□□□□□ -0.53
U2AF1L4-208	ENST00000587987	SIRT2	Q8IXJ6	389 aa		11.71	□□□□□ -0.53
U2AF1L4-208	ENST00000587987	ZC3H15	Q8WU90	426 aa	Known RBP	11.71	□□□□□ -0.53
U2AF1L4-208	ENST00000587987	CCDC85A	Q96PX6	553 aa	Predicted RBP	11.71	□□□□□ -0.53
U2AF1L4-208	ENST00000587987	RTFDC1	Q9BY42	306 aa	Predicted RBP	11.71	□□□□□ -0.53
U2AF1L4-208	ENST00000587987	DCTPP1	Q9H773	170 aa		11.71	□□□□□ -0.53
U2AF1L4-208	ENST00000587987	SEC31B	Q9NQW1	1179 aa		11.71	□□□□□ -0.53
U2AF1L4-208	ENST00000587987	CNNM1	Q9NRU3	951 aa		11.71	□□□□□ -0.53
U2AF1L4-208	ENST00000587987	MROH5	Q6ZUA9	1318 aa		11.7	□□□□□ -0.54
U2AF1L4-208	ENST00000587987	EYA2	O00167	538 aa		11.7	□□□□□ -0.54
U2AF1L4-208	ENST00000587987	SURF6	O75683	361 aa	Known RBP	11.7	□□□□□ -0.54
U2AF1L4-208	ENST00000587987	KIAA2012	Q0VF49	1180 aa		11.7	□□□□□ -0.54
U2AF1L4-208	ENST00000587987	SP8	Q8IXZ3	490 aa		11.7	□□□□□ -0.54
U2AF1L4-208	ENST00000587987	MICALL2	Q8IY33	904 aa		11.7	□□□□□ -0.54
U2AF1L4-208	ENST00000587987	MPND	Q8N594	471 aa		11.7	□□□□□ -0.54
U2AF1L4-208	ENST00000587987	CCDC136	Q96JN2	1154 aa		11.7	□□□□□ -0.54
U2AF1L4-208	ENST00000587987	ANKRD2	Q9GZV1	360 aa		11.7	□□□□□ -0.54
U2AF1L4-208	ENST00000587987	CNOT7	Q9UIV1	285 aa	Known RBP	11.7	□□□□□ -0.54
U2AF1L4-208	ENST00000587987		H7C1D1	291 aa		11.69	□□□□□ -0.54
U2AF1L4-208	ENST00000587987	OS9	Q13438	667 aa	Predicted RBP	11.69	□□□□□ -0.54
U2AF1L4-208	ENST00000587987	RGMB	Q6NW40	437 aa		11.69	□□□□□ -0.54
U2AF1L4-208	ENST00000587987	CELF1	Q92879	486 aa	Known RBP	11.69	□□□□□ -0.54
U2AF1L4-208	ENST00000587987	ZBTB47	Q9UFB7	747 aa	Predicted RBP	11.69	□□□□□ -0.54
U2AF1L4-208	ENST00000587987	YDJC	A8MPS7	323 aa		11.68	□□□□□ -0.54
U2AF1L4-208	ENST00000587987	KIF23	Q02241	960 aa	Predicted RBP	11.68	□□□□□ -0.54
U2AF1L4-208	ENST00000587987	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	11.68	□□□□□ -0.54
U2AF1L4-208	ENST00000587987	KRT26	Q7Z3Y9	468 aa		11.68	□□□□□ -0.54
U2AF1L4-208	ENST00000587987	ZNF594	Q96JF6	807 aa	Predicted RBP	11.68	□□□□□ -0.54
U2AF1L4-208	ENST00000587987	GBA2	Q9HCG7	927 aa	Predicted RBP	11.68	□□□□□ -0.54
U2AF1L4-208	ENST00000587987	SAGE1	Q9NXZ1	904 aa		11.68	□□□□□ -0.54
U2AF1L4-208	ENST00000587987	CEP126	Q9P2H0	1117 aa		11.68	□□□□□ -0.54
U2AF1L4-208	ENST00000587987	AKAP2	Q9Y2D5	859 aa		11.68	□□□□□ -0.54
U2AF1L4-208	ENST00000587987	ZBTB12	Q9Y330	459 aa	Predicted RBP	11.68	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms