RNA–Protein interactions for RNA: ENST00000587629.5

SDF2-205, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 775 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-205ENST00000587629 PODXL2Q9NZ53 605 aa8.26□□□□□ -1.09
SDF2-205ENST00000587629 IGKV5-2P06315 115 aa8.25□□□□□ -1.09
SDF2-205ENST00000587629 KIF23Q02241 960 aaPredicted RBP8.25□□□□□ -1.09
SDF2-205ENST00000587629 NOGQ13253 232 aa8.25□□□□□ -1.09
SDF2-205ENST00000587629 CWF19L2Q2TBE0 894 aaKnown RBP8.25□□□□□ -1.09
SDF2-205ENST00000587629 FAM161AQ3B820 660 aa8.25□□□□□ -1.09
SDF2-205ENST00000587629 ANGEL2Q5VTE6 544 aaKnown RBP8.25□□□□□ -1.09
SDF2-205ENST00000587629 RGMBQ6NW40 437 aa8.25□□□□□ -1.09
SDF2-205ENST00000587629 RSBN1LQ6PCB5 846 aaPredicted RBP8.25□□□□□ -1.09
SDF2-205ENST00000587629 POTEGQ6S5H5 508 aa8.25□□□□□ -1.09
SDF2-205ENST00000587629 KSR2Q6VAB6 950 aa8.25□□□□□ -1.09
SDF2-205ENST00000587629 G2E3Q7L622 706 aa8.25□□□□□ -1.09
SDF2-205ENST00000587629 SULF1Q8IWU6 871 aa8.25□□□□□ -1.09
SDF2-205ENST00000587629 MXD3Q9BW11 206 aa8.25□□□□□ -1.09
SDF2-205ENST00000587629 STK31Q9BXU1 1019 aa8.25□□□□□ -1.09
SDF2-205ENST00000587629 GREM2Q9H772 168 aa8.25□□□□□ -1.09
SDF2-205ENST00000587629 XDHP47989 1333 aa8.25□□□□□ -1.09
SDF2-205ENST00000587629 THSD7BQ9C0I4 1608 aa8.25□□□□□ -1.09
SDF2-205ENST00000587629 USP17L3A6NCW0 530 aa8.24□□□□□ -1.09
SDF2-205ENST00000587629 USP17L4A6NCW7 530 aa8.24□□□□□ -1.09
SDF2-205ENST00000587629 FAM155AB1AL88 458 aaPredicted RBP8.24□□□□□ -1.09
SDF2-205ENST00000587629 CA12O43570 354 aa8.24□□□□□ -1.09
SDF2-205ENST00000587629 USP17L8P0C7I0 530 aa8.24□□□□□ -1.09
SDF2-205ENST00000587629 ATP2B4P23634 1241 aa8.24□□□□□ -1.09
SDF2-205ENST00000587629 CTSWP56202 376 aa8.24□□□□□ -1.09
SDF2-205ENST00000587629 NEXNQ0ZGT2 675 aa8.24□□□□□ -1.09
SDF2-205ENST00000587629 DGKZQ13574 1117 aa8.24□□□□□ -1.09
SDF2-205ENST00000587629 PRAMEF18Q5VWM3 479 aa8.24□□□□□ -1.09
SDF2-205ENST00000587629 USP17L1Q7RTZ2 530 aa8.24□□□□□ -1.09
SDF2-205ENST00000587629 UBE3BQ7Z3V4 1068 aa8.24□□□□□ -1.09
SDF2-205ENST00000587629 TTLL11Q8NHH1 800 aa8.24□□□□□ -1.09
SDF2-205ENST00000587629 CDCA5Q96FF9 252 aa8.24□□□□□ -1.09
SDF2-205ENST00000587629 MCOLN1Q9GZU1 580 aa8.24□□□□□ -1.09
SDF2-205ENST00000587629 MYOZ2Q9NPC6 264 aa8.24□□□□□ -1.09
SDF2-205ENST00000587629 MINPP1Q9UNW1 487 aa8.24□□□□□ -1.09
SDF2-205ENST00000587629 SALL2Q9Y467 1007 aaPredicted RBP8.24□□□□□ -1.09
SDF2-205ENST00000587629 NEURL1BA8MQ27 555 aa8.23□□□□□ -1.09
SDF2-205ENST00000587629 TRPA1O75762 1119 aa8.23□□□□□ -1.09
SDF2-205ENST00000587629 ZNF280AP59817 542 aaPredicted RBP8.23□□□□□ -1.09
SDF2-205ENST00000587629 TWISTNBQ3B726 338 aaPredicted RBP8.23□□□□□ -1.09
SDF2-205ENST00000587629 MOB2Q70IA6 237 aa8.23□□□□□ -1.09
SDF2-205ENST00000587629 AGBL3Q8NEM8 1001 aa8.23□□□□□ -1.09
SDF2-205ENST00000587629 CCDC102AQ96A19 550 aa8.23□□□□□ -1.09
SDF2-205ENST00000587629 CDC5LQ99459 802 aaKnown RBP8.23□□□□□ -1.09
SDF2-205ENST00000587629 SCN9AQ15858 1988 aa8.22□□□□□ -1.09
SDF2-205ENST00000587629 CCT4P50991 539 aaKnown RBP8.22□□□□□ -1.09
SDF2-205ENST00000587629 NBPF9Q3BBW0 867 aa8.22□□□□□ -1.09
SDF2-205ENST00000587629 PODNQ7Z5L7 613 aa8.22□□□□□ -1.09
SDF2-205ENST00000587629 TXNRD3Q86VQ6 643 aa8.22□□□□□ -1.09
SDF2-205ENST00000587629 WWC1Q8IX03 1113 aa8.22□□□□□ -1.09
SDF2-205ENST00000587629 CSRNP1Q96S65 589 aa8.22□□□□□ -1.09
SDF2-205ENST00000587629 GMLQ99445 158 aa8.22□□□□□ -1.09
SDF2-205ENST00000587629 CHMP4AQ9BY43 222 aa8.22□□□□□ -1.09
SDF2-205ENST00000587629 BSDC1Q9NW68 430 aaPredicted RBP8.22□□□□□ -1.09
SDF2-205ENST00000587629 RNF186Q9NXI6 227 aa8.22□□□□□ -1.09
SDF2-205ENST00000587629 POLR2AP24928 1970 aaKnown RBP8.22□□□□□ -1.09
SDF2-205ENST00000587629 CASP8AP2Q9UKL3 1982 aa8.21□□□□□ -1.09
SDF2-205ENST00000587629 UBE2Q2LH0YL09 131 aa8.21□□□□□ -1.1
SDF2-205ENST00000587629 H7C1W4 665 aa8.21□□□□□ -1.1
SDF2-205ENST00000587629 SLC10A3P09131 477 aa8.21□□□□□ -1.1
SDF2-205ENST00000587629 ITGA6P23229 1130 aa8.21□□□□□ -1.1
SDF2-205ENST00000587629 KLRK1P26718 216 aa8.21□□□□□ -1.1
SDF2-205ENST00000587629 IGHMBP2P38935 993 aaKnown RBP8.21□□□□□ -1.1
SDF2-205ENST00000587629 MLLT1Q03111 559 aaPredicted RBP8.21□□□□□ -1.1
SDF2-205ENST00000587629 TTLL12Q14166 644 aaPredicted RBP8.21□□□□□ -1.1
SDF2-205ENST00000587629 GCKRQ14397 625 aa8.21□□□□□ -1.1
SDF2-205ENST00000587629 DACT2Q5SW24 774 aa8.21□□□□□ -1.1
SDF2-205ENST00000587629 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.21□□□□□ -1.1
SDF2-205ENST00000587629 POTEB2H3BUK9 544 aa8.2□□□□□ -1.1
SDF2-205ENST00000587629 SNAP23O00161 211 aa8.2□□□□□ -1.1
SDF2-205ENST00000587629 SASH1O94885 1247 aa8.2□□□□□ -1.1
SDF2-205ENST00000587629 KCNJ4P48050 445 aa8.2□□□□□ -1.1
SDF2-205ENST00000587629 FLIIQ13045 1269 aa8.2□□□□□ -1.1
SDF2-205ENST00000587629 MKRN3Q13064 507 aaKnown RBP8.2□□□□□ -1.1
SDF2-205ENST00000587629 FKBP5Q13451 457 aaPredicted RBP8.2□□□□□ -1.1
SDF2-205ENST00000587629 PRKG1Q13976 671 aa8.2□□□□□ -1.1
SDF2-205ENST00000587629 RASAL3Q86YV0 1011 aa8.2□□□□□ -1.1
SDF2-205ENST00000587629 KIAA0825Q8IV33 1275 aa8.2□□□□□ -1.1
SDF2-205ENST00000587629 OGFOD1Q8N543 542 aa8.2□□□□□ -1.1
SDF2-205ENST00000587629 HELBQ8NG08 1087 aaPredicted RBP8.2□□□□□ -1.1
SDF2-205ENST00000587629 MPHOSPH8Q99549 860 aa8.2□□□□□ -1.1
SDF2-205ENST00000587629 ZNF804BA4D1E1 1349 aa8.2□□□□□ -1.1
SDF2-205ENST00000587629 MED23Q9ULK4 1368 aa8.2□□□□□ -1.1
SDF2-205ENST00000587629 F6X3S4 739 aa8.19□□□□□ -1.1
SDF2-205ENST00000587629 WNT10BO00744 389 aa8.19□□□□□ -1.1
SDF2-205ENST00000587629 TAF5LO75529 589 aa8.19□□□□□ -1.1
SDF2-205ENST00000587629 CASP7P55210 303 aa8.19□□□□□ -1.1
SDF2-205ENST00000587629 GTF2IP78347 998 aa8.19□□□□□ -1.1
SDF2-205ENST00000587629 CCDC27Q2M243 656 aa8.19□□□□□ -1.1
SDF2-205ENST00000587629 STRIP1Q5VSL9 837 aa8.19□□□□□ -1.1
SDF2-205ENST00000587629 TTLL5Q6EMB2 1281 aa8.19□□□□□ -1.1
SDF2-205ENST00000587629 DNAAF4Q8WXU2 420 aa8.19□□□□□ -1.1
SDF2-205ENST00000587629 COA1Q9GZY4 146 aa8.19□□□□□ -1.1
SDF2-205ENST00000587629 MRS2Q9HD23 443 aa8.19□□□□□ -1.1
SDF2-205ENST00000587629 SAGE1Q9NXZ1 904 aa8.19□□□□□ -1.1
SDF2-205ENST00000587629 LEMD3Q9Y2U8 911 aa8.19□□□□□ -1.1
SDF2-205ENST00000587629 CHMP3Q9Y3E7 222 aa8.19□□□□□ -1.1
SDF2-205ENST00000587629 FANCIQ9NVI1 1328 aa8.19□□□□□ -1.1
SDF2-205ENST00000587629 SPEF2Q9C093 1822 aa8.19□□□□□ -1.1
SDF2-205ENST00000587629 PLIN1O60240 522 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms