RNA–Protein interactions for RNA: ENST00000587582.1

CDH20-204, Transcript of cadherin 20, humanhuman

TSL 4

Gene CDH20, Length 533 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20-204ENST00000587582 USP17L4A6NCW7 530 aa17.28■□□□□ 0.36
CDH20-204ENST00000587582 VIL1P09327 827 aaKnown RBP17.28■□□□□ 0.36
CDH20-204ENST00000587582 RPS12P25398 132 aaKnown RBP17.28■□□□□ 0.36
CDH20-204ENST00000587582 TBC1D10BQ4KMP7 808 aaPredicted RBP17.28■□□□□ 0.36
CDH20-204ENST00000587582 ZKSCAN2Q63HK3 967 aa17.28■□□□□ 0.36
CDH20-204ENST00000587582 USP17L1Q7RTZ2 530 aa17.28■□□□□ 0.36
CDH20-204ENST00000587582 SAMD7Q7Z3H4 446 aa17.28■□□□□ 0.36
CDH20-204ENST00000587582 DPF2Q92785 391 aa17.28■□□□□ 0.36
CDH20-204ENST00000587582 LRRFIP2Q9Y608 721 aaKnown RBP17.28■□□□□ 0.36
CDH20-204ENST00000587582 LRRC24Q50LG9 513 aa17.27■□□□□ 0.36
CDH20-204ENST00000587582 INTS3Q68E01 1043 aaKnown RBP17.27■□□□□ 0.36
CDH20-204ENST00000587582 RSBN1LQ6PCB5 846 aaPredicted RBP17.27■□□□□ 0.36
CDH20-204ENST00000587582 MXD3Q9BW11 206 aa17.27■□□□□ 0.36
CDH20-204ENST00000587582 A0A1B0GUL6 1792 aa17.27■□□□□ 0.35
CDH20-204ENST00000587582 CEP350Q5VT06 3117 aa17.26■□□□□ 0.35
CDH20-204ENST00000587582 ITGBL1O95965 494 aaPredicted RBP17.26■□□□□ 0.35
CDH20-204ENST00000587582 EGFRP00533 1210 aa17.26■□□□□ 0.35
CDH20-204ENST00000587582 HIRAP54198 1017 aaPredicted RBP17.26■□□□□ 0.35
CDH20-204ENST00000587582 METTL24Q5JXM2 366 aa17.26■□□□□ 0.35
CDH20-204ENST00000587582 PASKQ96RG2 1323 aa17.25■□□□□ 0.35
CDH20-204ENST00000587582 FMR1Q06787 632 aaKnown RBP eCLIP17.25■□□□□ 0.35
CDH20-204ENST00000587582 ZNF804AQ7Z570 1209 aa17.25■□□□□ 0.35
CDH20-204ENST00000587582 FTSJ3Q8IY81 847 aaKnown RBP17.25■□□□□ 0.35
CDH20-204ENST00000587582 AGBL3Q8NEM8 1001 aa17.25■□□□□ 0.35
CDH20-204ENST00000587582 CD209Q9NNX6 404 aa17.25■□□□□ 0.35
CDH20-204ENST00000587582 HDAC5Q9UQL6 1122 aa17.25■□□□□ 0.35
CDH20-204ENST00000587582 RIPOR2Q9Y4F9 1068 aa17.25■□□□□ 0.35
CDH20-204ENST00000587582 MROH5Q6ZUA9 1318 aa17.24■□□□□ 0.35
CDH20-204ENST00000587582 TRAF5O00463 557 aa17.24■□□□□ 0.35
CDH20-204ENST00000587582 GNAI3P08754 354 aa17.24■□□□□ 0.35
CDH20-204ENST00000587582 GTF2IP78347 998 aa17.24■□□□□ 0.35
CDH20-204ENST00000587582 KIF4BQ2VIQ3 1234 aa17.24■□□□□ 0.35
CDH20-204ENST00000587582 DACT2Q5SW24 774 aa17.24■□□□□ 0.35
CDH20-204ENST00000587582 TTLL5Q6EMB2 1281 aa17.24■□□□□ 0.35
CDH20-204ENST00000587582 TMEM57Q8N5G2 664 aa17.24■□□□□ 0.35
CDH20-204ENST00000587582 SIL1Q9H173 461 aa17.24■□□□□ 0.35
CDH20-204ENST00000587582 JAG2Q9Y219 1238 aa17.24■□□□□ 0.35
CDH20-204ENST00000587582 IRS2Q9Y4H2 1338 aa17.23■□□□□ 0.35
CDH20-204ENST00000587582 USP17L8P0C7I0 530 aa17.23■□□□□ 0.35
CDH20-204ENST00000587582 STRIP1Q5VSL9 837 aa17.23■□□□□ 0.35
CDH20-204ENST00000587582 GLIS2Q9BZE0 524 aaPredicted RBP17.23■□□□□ 0.35
CDH20-204ENST00000587582 CREBZFQ9NS37 354 aa17.23■□□□□ 0.35
CDH20-204ENST00000587582 PSME4Q14997 1843 aa17.22■□□□□ 0.35
CDH20-204ENST00000587582 TMEM88BA6NKF7 163 aa17.22■□□□□ 0.35
CDH20-204ENST00000587582 GYG1P46976 350 aa17.22■□□□□ 0.35
CDH20-204ENST00000587582 RFX5P48382 616 aaPredicted RBP17.22■□□□□ 0.35
CDH20-204ENST00000587582 UBE4AQ14139 1066 aa17.22■□□□□ 0.35
CDH20-204ENST00000587582 C15orf52Q6ZUT6 534 aaKnown RBP17.22■□□□□ 0.35
CDH20-204ENST00000587582 DNAJC5GQ8N7S2 189 aa17.22■□□□□ 0.35
CDH20-204ENST00000587582 KLRG1Q96E93 195 aa17.22■□□□□ 0.35
CDH20-204ENST00000587582 EYA2O00167 538 aa17.21■□□□□ 0.35
CDH20-204ENST00000587582 PTPN12Q05209 780 aaKnown RBP17.21■□□□□ 0.35
CDH20-204ENST00000587582 ITPRIPQ8IWB1 547 aa17.21■□□□□ 0.35
CDH20-204ENST00000587582 ZC3H15Q8WU90 426 aaKnown RBP17.21■□□□□ 0.35
CDH20-204ENST00000587582 GMLQ99445 158 aa17.21■□□□□ 0.35
CDH20-204ENST00000587582 ZNF408Q9H9D4 720 aa17.21■□□□□ 0.35
CDH20-204ENST00000587582 MKRN1Q9UHC7 482 aaKnown RBP17.21■□□□□ 0.35
CDH20-204ENST00000587582 PA2G4Q9UQ80 394 aaKnown RBP17.21■□□□□ 0.35
CDH20-204ENST00000587582 MYO3BQ8WXR4 1341 aa17.21■□□□□ 0.34
CDH20-204ENST00000587582 PDE8BO95263 885 aa17.2■□□□□ 0.34
CDH20-204ENST00000587582 ZNF280AP59817 542 aaPredicted RBP17.2■□□□□ 0.34
CDH20-204ENST00000587582 VPS37DQ86XT2 251 aa17.2■□□□□ 0.34
CDH20-204ENST00000587582 KIAA0825Q8IV33 1275 aa17.2■□□□□ 0.34
CDH20-204ENST00000587582 DZIP1LQ8IYY4 767 aaKnown RBP17.2■□□□□ 0.34
CDH20-204ENST00000587582 OGFOD1Q8N543 542 aa17.2■□□□□ 0.34
CDH20-204ENST00000587582 DCPSQ96C86 337 aaKnown RBP17.2■□□□□ 0.34
CDH20-204ENST00000587582 MYOZ2Q9NPC6 264 aa17.2■□□□□ 0.34
CDH20-204ENST00000587582 GGA3Q9NZ52 723 aa17.2■□□□□ 0.34
CDH20-204ENST00000587582 ABT1Q9ULW3 272 aaKnown RBP17.2■□□□□ 0.34
CDH20-204ENST00000587582 ZNF609O15014 1411 aa17.2■□□□□ 0.34
CDH20-204ENST00000587582 ASTN2O75129 1339 aaPredicted RBP17.2■□□□□ 0.34
CDH20-204ENST00000587582 F8W031 263 aaPredicted RBP17.19■□□□□ 0.34
CDH20-204ENST00000587582 SRGAP3O43295 1099 aa17.19■□□□□ 0.34
CDH20-204ENST00000587582 GNAI2P04899 355 aa17.19■□□□□ 0.34
CDH20-204ENST00000587582 RLBP1P12271 317 aa17.19■□□□□ 0.34
CDH20-204ENST00000587582 IL1R1P14778 569 aa17.19■□□□□ 0.34
CDH20-204ENST00000587582 HIBADHP31937 336 aaKnown RBP17.19■□□□□ 0.34
CDH20-204ENST00000587582 CDC37L1Q7L3B6 337 aa17.19■□□□□ 0.34
CDH20-204ENST00000587582 KRT26Q7Z3Y9 468 aa17.19■□□□□ 0.34
CDH20-204ENST00000587582 USP48Q86UV5 1035 aa17.19■□□□□ 0.34
CDH20-204ENST00000587582 VGLL2Q8N8G2 317 aa17.19■□□□□ 0.34
CDH20-204ENST00000587582 PGAP2Q9UHJ9 254 aa17.19■□□□□ 0.34
CDH20-204ENST00000587582 IQSEC3Q9UPP2 1182 aaPredicted RBP17.19■□□□□ 0.34
CDH20-204ENST00000587582 SCARF1Q14162 830 aa17.18■□□□□ 0.34
CDH20-204ENST00000587582 PUM3Q15397 648 aaKnown RBP17.18■□□□□ 0.34
CDH20-204ENST00000587582 DLK2Q6UY11 383 aa17.18■□□□□ 0.34
CDH20-204ENST00000587582 ATG9AQ7Z3C6 839 aa17.18■□□□□ 0.34
CDH20-204ENST00000587582 FAM84BQ96KN1 310 aaPredicted RBP17.18■□□□□ 0.34
CDH20-204ENST00000587582 ZNF646O15015 1829 aaPredicted RBP17.17■□□□□ 0.34
CDH20-204ENST00000587582 ADM5C9JUS6 153 aa17.17■□□□□ 0.34
CDH20-204ENST00000587582 FRAT2O75474 233 aaPredicted RBP17.17■□□□□ 0.34
CDH20-204ENST00000587582 CELF2O95319 508 aaKnown RBP17.17■□□□□ 0.34
CDH20-204ENST00000587582 IFIT1P09914 478 aaKnown RBP17.17■□□□□ 0.34
CDH20-204ENST00000587582 CAVIN4Q5BKX8 364 aa17.17■□□□□ 0.34
CDH20-204ENST00000587582 ANGEL2Q5VTE6 544 aaKnown RBP17.17■□□□□ 0.34
CDH20-204ENST00000587582 CERS5Q8N5B7 392 aa17.17■□□□□ 0.34
CDH20-204ENST00000587582 YTHDC1Q96MU7 727 aaKnown RBP17.17■□□□□ 0.34
CDH20-204ENST00000587582 C1orf115Q9H7X2 142 aa17.17■□□□□ 0.34
CDH20-204ENST00000587582 HDAC9Q9UKV0 1011 aa17.17■□□□□ 0.34
CDH20-204ENST00000587582 SASH1O94885 1247 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms