RNA–Protein interactions for RNA: ENST00000587290.5

PRKCSH-204, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 780 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-204ENST00000587290 CCT4P50991 539 aaKnown RBP19.44■□□□□ 0.7
PRKCSH-204ENST00000587290 BRPF1P55201 1214 aaPredicted RBP19.44■□□□□ 0.7
PRKCSH-204ENST00000587290 CASP7P55210 303 aa19.44■□□□□ 0.7
PRKCSH-204ENST00000587290 USP17L1Q7RTZ2 530 aa19.44■□□□□ 0.7
PRKCSH-204ENST00000587290 AGBL3Q8NEM8 1001 aa19.44■□□□□ 0.7
PRKCSH-204ENST00000587290 DNAAF4Q8WXU2 420 aa19.44■□□□□ 0.7
PRKCSH-204ENST00000587290 CDCA5Q96FF9 252 aa19.44■□□□□ 0.7
PRKCSH-204ENST00000587290 AKAP11Q9UKA4 1901 aa19.43■□□□□ 0.7
PRKCSH-204ENST00000587290 FAM155AB1AL88 458 aaPredicted RBP19.43■□□□□ 0.7
PRKCSH-204ENST00000587290 F6X3S4 739 aa19.43■□□□□ 0.7
PRKCSH-204ENST00000587290 VAMP4O75379 141 aa19.43■□□□□ 0.7
PRKCSH-204ENST00000587290 USP17L8P0C7I0 530 aa19.43■□□□□ 0.7
PRKCSH-204ENST00000587290 ITGA6P23229 1130 aa19.43■□□□□ 0.7
PRKCSH-204ENST00000587290 MYOZ2Q9NPC6 264 aa19.43■□□□□ 0.7
PRKCSH-204ENST00000587290 SNAP23O00161 211 aa19.42■□□□□ 0.7
PRKCSH-204ENST00000587290 ANP32CO43423 234 aa19.42■□□□□ 0.7
PRKCSH-204ENST00000587290 NOGQ13253 232 aa19.42■□□□□ 0.7
PRKCSH-204ENST00000587290 RGMBQ6NW40 437 aa19.42■□□□□ 0.7
PRKCSH-204ENST00000587290 C2orf69Q8N8R5 385 aa19.42■□□□□ 0.7
PRKCSH-204ENST00000587290 IGHMBP2P38935 993 aaKnown RBP19.41■□□□□ 0.7
PRKCSH-204ENST00000587290 DACT2Q5SW24 774 aa19.41■□□□□ 0.7
PRKCSH-204ENST00000587290 PRAMEF18Q5VWM3 479 aa19.41■□□□□ 0.7
PRKCSH-204ENST00000587290 PODNQ7Z5L7 613 aa19.41■□□□□ 0.7
PRKCSH-204ENST00000587290 PLA2G12BQ9BX93 195 aa19.41■□□□□ 0.7
PRKCSH-204ENST00000587290 PAPPA2Q9BXP8 1791 aa19.4■□□□□ 0.7
PRKCSH-204ENST00000587290 ZNF157P51786 506 aaPredicted RBP19.4■□□□□ 0.7
PRKCSH-204ENST00000587290 NBPF9Q3BBW0 867 aa19.4■□□□□ 0.7
PRKCSH-204ENST00000587290 MOB2Q70IA6 237 aa19.4■□□□□ 0.7
PRKCSH-204ENST00000587290 LINS1Q8NG48 757 aa19.4■□□□□ 0.7
PRKCSH-204ENST00000587290 ZNF316A6NFI3 1004 aaPredicted RBP19.39■□□□□ 0.69
PRKCSH-204ENST00000587290 KIF23Q02241 960 aaPredicted RBP19.39■□□□□ 0.69
PRKCSH-204ENST00000587290 MYH16Q9H6N6 1097 aa19.39■□□□□ 0.69
PRKCSH-204ENST00000587290 ZNF804BA4D1E1 1349 aa19.39■□□□□ 0.69
PRKCSH-204ENST00000587290 SASH1O94885 1247 aa19.38■□□□□ 0.69
PRKCSH-204ENST00000587290 CSF1RP07333 972 aa19.38■□□□□ 0.69
PRKCSH-204ENST00000587290 WDR63Q8IWG1 891 aa19.38■□□□□ 0.69
PRKCSH-204ENST00000587290 FAM9BQ8IZU0 186 aa19.38■□□□□ 0.69
PRKCSH-204ENST00000587290 HELBQ8NG08 1087 aaPredicted RBP19.38■□□□□ 0.69
PRKCSH-204ENST00000587290 MPHOSPH8Q99549 860 aa19.38■□□□□ 0.69
PRKCSH-204ENST00000587290 CHMP3Q9Y3E7 222 aa19.38■□□□□ 0.69
PRKCSH-204ENST00000587290 CCDC85CA6NKD9 419 aa19.37■□□□□ 0.69
PRKCSH-204ENST00000587290 CA12O43570 354 aa19.37■□□□□ 0.69
PRKCSH-204ENST00000587290 TAF5LO75529 589 aa19.37■□□□□ 0.69
PRKCSH-204ENST00000587290 FOXO4P98177 505 aa19.37■□□□□ 0.69
PRKCSH-204ENST00000587290 CHRNDQ07001 517 aa19.37■□□□□ 0.69
PRKCSH-204ENST00000587290 COA1Q9GZY4 146 aa19.37■□□□□ 0.69
PRKCSH-204ENST00000587290 LEMD3Q9Y2U8 911 aa19.37■□□□□ 0.69
PRKCSH-204ENST00000587290 SLC10A3P09131 477 aa19.36■□□□□ 0.69
PRKCSH-204ENST00000587290 NCBP3Q53F19 620 aaKnown RBP19.36■□□□□ 0.69
PRKCSH-204ENST00000587290 EPHA10Q5JZY3 1008 aa19.36■□□□□ 0.69
PRKCSH-204ENST00000587290 BEND3Q5T5X7 828 aa19.36■□□□□ 0.69
PRKCSH-204ENST00000587290 MCOLN1Q9GZU1 580 aa19.36■□□□□ 0.69
PRKCSH-204ENST00000587290 WNT10BO00744 389 aa19.35■□□□□ 0.69
PRKCSH-204ENST00000587290 KCNJ4P48050 445 aa19.35■□□□□ 0.69
PRKCSH-204ENST00000587290 GTF2IP78347 998 aa19.35■□□□□ 0.69
PRKCSH-204ENST00000587290 STRIP1Q5VSL9 837 aa19.35■□□□□ 0.69
PRKCSH-204ENST00000587290 RASAL3Q86YV0 1011 aa19.35■□□□□ 0.69
PRKCSH-204ENST00000587290 KIAA0825Q8IV33 1275 aa19.35■□□□□ 0.69
PRKCSH-204ENST00000587290 PITPNM2Q9BZ72 1349 aa19.34■□□□□ 0.69
PRKCSH-204ENST00000587290 ANKRD18BA2A2Z9 1011 aa19.34■□□□□ 0.69
PRKCSH-204ENST00000587290 TTLL5Q6EMB2 1281 aa19.34■□□□□ 0.69
PRKCSH-204ENST00000587290 CCDC102AQ96A19 550 aa19.34■□□□□ 0.69
PRKCSH-204ENST00000587290 ZNF594Q96JF6 807 aaPredicted RBP19.34■□□□□ 0.69
PRKCSH-204ENST00000587290 ANKRD2Q9GZV1 360 aa19.34■□□□□ 0.69
PRKCSH-204ENST00000587290 ECM29Q5VYK3 1845 aa19.34■□□□□ 0.69
PRKCSH-204ENST00000587290 IRS2Q9Y4H2 1338 aa19.33■□□□□ 0.69
PRKCSH-204ENST00000587290 UBE2Q2LH0YL09 131 aa19.33■□□□□ 0.68
PRKCSH-204ENST00000587290 TRPA1O75762 1119 aa19.33■□□□□ 0.68
PRKCSH-204ENST00000587290 DGKZQ13574 1117 aa19.33■□□□□ 0.68
PRKCSH-204ENST00000587290 OGFOD1Q8N543 542 aa19.33■□□□□ 0.68
PRKCSH-204ENST00000587290 CSRNP1Q96S65 589 aa19.33■□□□□ 0.68
PRKCSH-204ENST00000587290 JAG2Q9Y219 1238 aa19.33■□□□□ 0.68
PRKCSH-204ENST00000587290 IFIT5Q13325 482 aaKnown RBP19.32■□□□□ 0.68
PRKCSH-204ENST00000587290 LMBR1LQ6UX01 489 aa19.32■□□□□ 0.68
PRKCSH-204ENST00000587290 CERS5Q8N5B7 392 aa19.32■□□□□ 0.68
PRKCSH-204ENST00000587290 RNF186Q9NXI6 227 aa19.32■□□□□ 0.68
PRKCSH-204ENST00000587290 PCDHAC2Q9Y5I4 1007 aa19.32■□□□□ 0.68
PRKCSH-204ENST00000587290 MYO3BQ8WXR4 1341 aa19.31■□□□□ 0.68
PRKCSH-204ENST00000587290 PLIN1O60240 522 aa19.31■□□□□ 0.68
PRKCSH-204ENST00000587290 ZEB1P37275 1124 aaPredicted RBP19.31■□□□□ 0.68
PRKCSH-204ENST00000587290 SLC4A10Q6U841 1118 aa19.31■□□□□ 0.68
PRKCSH-204ENST00000587290 CD209Q9NNX6 404 aa19.31■□□□□ 0.68
PRKCSH-204ENST00000587290 FZD1Q9UP38 647 aa19.31■□□□□ 0.68
PRKCSH-204ENST00000587290 GRM8O00222 908 aa19.3■□□□□ 0.68
PRKCSH-204ENST00000587290 MKRN3Q13064 507 aaKnown RBP19.3■□□□□ 0.68
PRKCSH-204ENST00000587290 PRKG1Q13976 671 aa19.3■□□□□ 0.68
PRKCSH-204ENST00000587290 TTLL12Q14166 644 aaPredicted RBP19.3■□□□□ 0.68
PRKCSH-204ENST00000587290 F8W031 263 aaPredicted RBP19.29■□□□□ 0.68
PRKCSH-204ENST00000587290 AOX1Q06278 1338 aa19.28■□□□□ 0.68
PRKCSH-204ENST00000587290 FKBP1BP68106 108 aa19.28■□□□□ 0.68
PRKCSH-204ENST00000587290 SAGE1Q9NXZ1 904 aa19.28■□□□□ 0.68
PRKCSH-204ENST00000587290 TAF7LQ5H9L4 462 aa19.27■□□□□ 0.68
PRKCSH-204ENST00000587290 SUCLG2Q96I99 432 aa19.27■□□□□ 0.68
PRKCSH-204ENST00000587290 ZBED3Q96IU2 234 aaPredicted RBP19.27■□□□□ 0.68
PRKCSH-204ENST00000587290 C9orf78Q9NZ63 289 aaPredicted RBP19.27■□□□□ 0.68
PRKCSH-204ENST00000587290 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.27■□□□□ 0.68
PRKCSH-204ENST00000587290 ARAP2Q8WZ64 1704 aa19.26■□□□□ 0.67
PRKCSH-204ENST00000587290 CCDC57Q2TAC2 916 aa19.26■□□□□ 0.67
PRKCSH-204ENST00000587290 LDHAL6AQ6ZMR3 332 aa19.26■□□□□ 0.67
PRKCSH-204ENST00000587290 KAZALD1Q96I82 304 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms