RNA–Protein interactions for RNA: ENST00000587256.1

ATG4D-207, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-207ENST00000587256 TXNRD3Q86VQ6 643 aa18.54■□□□□ 0.56
ATG4D-207ENST00000587256 KLHDC4Q8TBB5 520 aa18.54■□□□□ 0.56
ATG4D-207ENST00000587256 DPF2Q92785 391 aa18.54■□□□□ 0.56
ATG4D-207ENST00000587256 CNOT7Q9UIV1 285 aaKnown RBP18.54■□□□□ 0.56
ATG4D-207ENST00000587256 MROH5Q6ZUA9 1318 aa18.53■□□□□ 0.56
ATG4D-207ENST00000587256 SHTN1A0MZ66 631 aa18.53■□□□□ 0.56
ATG4D-207ENST00000587256 USP17L3A6NCW0 530 aa18.53■□□□□ 0.56
ATG4D-207ENST00000587256 USP17L4A6NCW7 530 aa18.53■□□□□ 0.56
ATG4D-207ENST00000587256 METTL24Q5JXM2 366 aa18.53■□□□□ 0.56
ATG4D-207ENST00000587256 USP17L1Q7RTZ2 530 aa18.53■□□□□ 0.56
ATG4D-207ENST00000587256 ZNF609O15014 1411 aa18.52■□□□□ 0.56
ATG4D-207ENST00000587256 VIL1P09327 827 aaKnown RBP18.52■□□□□ 0.56
ATG4D-207ENST00000587256 RSBN1LQ6PCB5 846 aaPredicted RBP18.52■□□□□ 0.56
ATG4D-207ENST00000587256 ZNF804AQ7Z570 1209 aa18.52■□□□□ 0.56
ATG4D-207ENST00000587256 TMEM57Q8N5G2 664 aa18.52■□□□□ 0.56
ATG4D-207ENST00000587256 TRPM4Q8TD43 1214 aa18.52■□□□□ 0.56
ATG4D-207ENST00000587256 LRRC24Q50LG9 513 aa18.51■□□□□ 0.55
ATG4D-207ENST00000587256 C15orf52Q6ZUT6 534 aaKnown RBP18.51■□□□□ 0.55
ATG4D-207ENST00000587256 AGBL3Q8NEM8 1001 aa18.51■□□□□ 0.55
ATG4D-207ENST00000587256 RIPOR2Q9Y4F9 1068 aa18.51■□□□□ 0.55
ATG4D-207ENST00000587256 HTRA3P83110 453 aa18.5■□□□□ 0.55
ATG4D-207ENST00000587256 TBC1D10BQ4KMP7 808 aaPredicted RBP18.5■□□□□ 0.55
ATG4D-207ENST00000587256 DZIP1LQ8IYY4 767 aaKnown RBP18.5■□□□□ 0.55
ATG4D-207ENST00000587256 CNTROBQ8N137 903 aa18.5■□□□□ 0.55
ATG4D-207ENST00000587256 IRS2Q9Y4H2 1338 aa18.49■□□□□ 0.55
ATG4D-207ENST00000587256 RFX5P48382 616 aaPredicted RBP18.49■□□□□ 0.55
ATG4D-207ENST00000587256 UBE4AQ14139 1066 aa18.49■□□□□ 0.55
ATG4D-207ENST00000587256 STRIP1Q5VSL9 837 aa18.49■□□□□ 0.55
ATG4D-207ENST00000587256 SAMD7Q7Z3H4 446 aa18.49■□□□□ 0.55
ATG4D-207ENST00000587256 ITPRIPQ8IWB1 547 aa18.49■□□□□ 0.55
ATG4D-207ENST00000587256 SIL1Q9H173 461 aa18.49■□□□□ 0.55
ATG4D-207ENST00000587256 CD209Q9NNX6 404 aa18.49■□□□□ 0.55
ATG4D-207ENST00000587256 MYO3BQ8WXR4 1341 aa18.49■□□□□ 0.55
ATG4D-207ENST00000587256 PASKQ96RG2 1323 aa18.49■□□□□ 0.55
ATG4D-207ENST00000587256 EYA2O00167 538 aa18.48■□□□□ 0.55
ATG4D-207ENST00000587256 GNAI2P04899 355 aa18.48■□□□□ 0.55
ATG4D-207ENST00000587256 PTPN12Q05209 780 aaKnown RBP18.48■□□□□ 0.55
ATG4D-207ENST00000587256 KIF4BQ2VIQ3 1234 aa18.48■□□□□ 0.55
ATG4D-207ENST00000587256 DACT2Q5SW24 774 aa18.48■□□□□ 0.55
ATG4D-207ENST00000587256 RBM26Q5T8P6 1007 aaKnown RBP18.48■□□□□ 0.55
ATG4D-207ENST00000587256 ZNF646O15015 1829 aaPredicted RBP18.48■□□□□ 0.55
ATG4D-207ENST00000587256 CEP350Q5VT06 3117 aa18.48■□□□□ 0.55
ATG4D-207ENST00000587256 ITGBL1O95965 494 aaPredicted RBP18.47■□□□□ 0.55
ATG4D-207ENST00000587256 USP17L8P0C7I0 530 aa18.47■□□□□ 0.55
ATG4D-207ENST00000587256 HIRAP54198 1017 aaPredicted RBP18.47■□□□□ 0.55
ATG4D-207ENST00000587256 GTF2IP78347 998 aa18.47■□□□□ 0.55
ATG4D-207ENST00000587256 MXD3Q9BW11 206 aa18.47■□□□□ 0.55
ATG4D-207ENST00000587256 SRGAP3O43295 1099 aa18.46■□□□□ 0.55
ATG4D-207ENST00000587256 PDE8BO95263 885 aa18.46■□□□□ 0.55
ATG4D-207ENST00000587256 EGFRP00533 1210 aa18.46■□□□□ 0.55
ATG4D-207ENST00000587256 RLBP1P12271 317 aa18.46■□□□□ 0.55
ATG4D-207ENST00000587256 GYG1P46976 350 aa18.46■□□□□ 0.55
ATG4D-207ENST00000587256 PUM3Q15397 648 aaKnown RBP18.46■□□□□ 0.55
ATG4D-207ENST00000587256 TTLL5Q6EMB2 1281 aa18.46■□□□□ 0.55
ATG4D-207ENST00000587256 VGLL2Q8N8G2 317 aa18.46■□□□□ 0.55
ATG4D-207ENST00000587256 ZC3H15Q8WU90 426 aaKnown RBP18.46■□□□□ 0.55
ATG4D-207ENST00000587256 GMLQ99445 158 aa18.46■□□□□ 0.55
ATG4D-207ENST00000587256 RCAN3Q9UKA8 241 aa18.46■□□□□ 0.55
ATG4D-207ENST00000587256 IL1R1P14778 569 aa18.45■□□□□ 0.54
ATG4D-207ENST00000587256 ZNF280AP59817 542 aaPredicted RBP18.45■□□□□ 0.54
ATG4D-207ENST00000587256 VPS37DQ86XT2 251 aa18.45■□□□□ 0.54
ATG4D-207ENST00000587256 OGFOD1Q8N543 542 aa18.45■□□□□ 0.54
ATG4D-207ENST00000587256 CREBZFQ9NS37 354 aa18.45■□□□□ 0.54
ATG4D-207ENST00000587256 FBXO3Q9UK99 471 aa18.45■□□□□ 0.54
ATG4D-207ENST00000587256 PA2G4Q9UQ80 394 aaKnown RBP18.45■□□□□ 0.54
ATG4D-207ENST00000587256 CIAO1O76071 339 aa18.44■□□□□ 0.54
ATG4D-207ENST00000587256 IFIT1P09914 478 aaKnown RBP18.44■□□□□ 0.54
ATG4D-207ENST00000587256 MS4A1P11836 297 aa18.44■□□□□ 0.54
ATG4D-207ENST00000587256 HIBADHP31937 336 aaKnown RBP18.44■□□□□ 0.54
ATG4D-207ENST00000587256 MTX1Q13505 466 aa18.44■□□□□ 0.54
ATG4D-207ENST00000587256 YTHDC1Q96MU7 727 aaKnown RBP18.44■□□□□ 0.54
ATG4D-207ENST00000587256 GLIS2Q9BZE0 524 aaPredicted RBP18.44■□□□□ 0.54
ATG4D-207ENST00000587256 MYOZ2Q9NPC6 264 aa18.44■□□□□ 0.54
ATG4D-207ENST00000587256 JAG2Q9Y219 1238 aa18.44■□□□□ 0.54
ATG4D-207ENST00000587256 TMEM88BA6NKF7 163 aa18.43■□□□□ 0.54
ATG4D-207ENST00000587256 TRAF5O00463 557 aa18.43■□□□□ 0.54
ATG4D-207ENST00000587256 SLC5A1P13866 664 aa18.43■□□□□ 0.54
ATG4D-207ENST00000587256 IL15P40933 162 aaPredicted RBP18.43■□□□□ 0.54
ATG4D-207ENST00000587256 CAVIN4Q5BKX8 364 aa18.43■□□□□ 0.54
ATG4D-207ENST00000587256 ATG9AQ7Z3C6 839 aa18.43■□□□□ 0.54
ATG4D-207ENST00000587256 KIAA0825Q8IV33 1275 aa18.43■□□□□ 0.54
ATG4D-207ENST00000587256 PANK1Q8TE04 598 aa18.43■□□□□ 0.54
ATG4D-207ENST00000587256 FAM84BQ96KN1 310 aaPredicted RBP18.43■□□□□ 0.54
ATG4D-207ENST00000587256 COPRSQ9NQ92 184 aa18.43■□□□□ 0.54
ATG4D-207ENST00000587256 GGA3Q9NZ52 723 aa18.43■□□□□ 0.54
ATG4D-207ENST00000587256 CEP126Q9P2H0 1117 aa18.43■□□□□ 0.54
ATG4D-207ENST00000587256 PGAP2Q9UHJ9 254 aa18.43■□□□□ 0.54
ATG4D-207ENST00000587256 DCPSQ96C86 337 aaKnown RBP18.42■□□□□ 0.54
ATG4D-207ENST00000587256 HDAC9Q9UKV0 1011 aa18.42■□□□□ 0.54
ATG4D-207ENST00000587256 FRAT2O75474 233 aaPredicted RBP18.41■□□□□ 0.54
ATG4D-207ENST00000587256 FMR1Q06787 632 aaKnown RBP eCLIP18.41■□□□□ 0.54
ATG4D-207ENST00000587256 ATP2B3Q16720 1220 aa18.41■□□□□ 0.54
ATG4D-207ENST00000587256 CDC37L1Q7L3B6 337 aa18.41■□□□□ 0.54
ATG4D-207ENST00000587256 LPIN2Q92539 896 aa18.41■□□□□ 0.54
ATG4D-207ENST00000587256 KLRG1Q96E93 195 aa18.41■□□□□ 0.54
ATG4D-207ENST00000587256 C1orf115Q9H7X2 142 aa18.41■□□□□ 0.54
ATG4D-207ENST00000587256 IQSEC3Q9UPP2 1182 aaPredicted RBP18.41■□□□□ 0.54
ATG4D-207ENST00000587256 SASH1O94885 1247 aa18.4■□□□□ 0.54
ATG4D-207ENST00000587256 FGFR2P21802 821 aa18.4■□□□□ 0.54
ATG4D-207ENST00000587256 SCARF1Q14162 830 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms