RNA–Protein interactions for RNA: ENST00000587062.1

VAT1-203, Transcript of vesicle amine transport 1, humanhuman

TSL 4

Gene VAT1, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-203ENST00000587062 HELBQ8NG08 1087 aaPredicted RBP25.4■■□□□ 1.66
VAT1-203ENST00000587062 PGAP2Q9UHJ9 254 aa25.4■■□□□ 1.66
VAT1-203ENST00000587062 MROH5Q6ZUA9 1318 aa25.39■■□□□ 1.66
VAT1-203ENST00000587062 RBM26Q5T8P6 1007 aaKnown RBP25.39■■□□□ 1.66
VAT1-203ENST00000587062 C15orf52Q6ZUT6 534 aaKnown RBP25.39■■□□□ 1.66
VAT1-203ENST00000587062 KAZALD1Q96I82 304 aa25.39■■□□□ 1.66
VAT1-203ENST00000587062 ZBED9Q6R2W3 1325 aa25.38■■□□□ 1.65
VAT1-203ENST00000587062 USP17L8P0C7I0 530 aa25.38■■□□□ 1.65
VAT1-203ENST00000587062 TBC1D10BQ4KMP7 808 aaPredicted RBP25.38■■□□□ 1.65
VAT1-203ENST00000587062 TTLL5Q6EMB2 1281 aa25.38■■□□□ 1.65
VAT1-203ENST00000587062 SAMD7Q7Z3H4 446 aa25.38■■□□□ 1.65
VAT1-203ENST00000587062 FRAT1Q92837 279 aaPredicted RBP25.38■■□□□ 1.65
VAT1-203ENST00000587062 DCPSQ96C86 337 aaKnown RBP25.38■■□□□ 1.65
VAT1-203ENST00000587062 WTIPA6NIX2 430 aaPredicted RBP25.37■■□□□ 1.65
VAT1-203ENST00000587062 UBE4AQ14139 1066 aa25.37■■□□□ 1.65
VAT1-203ENST00000587062 KIF4BQ2VIQ3 1234 aa25.37■■□□□ 1.65
VAT1-203ENST00000587062 TRPM4Q8TD43 1214 aa25.37■■□□□ 1.65
VAT1-203ENST00000587062 ZNF609O15014 1411 aa25.37■■□□□ 1.65
VAT1-203ENST00000587062 HIRAP54198 1017 aaPredicted RBP25.36■■□□□ 1.65
VAT1-203ENST00000587062 TXNRD3Q86VQ6 643 aa25.36■■□□□ 1.65
VAT1-203ENST00000587062 CD209Q9NNX6 404 aa25.36■■□□□ 1.65
VAT1-203ENST00000587062 ABT1Q9ULW3 272 aaKnown RBP25.36■■□□□ 1.65
VAT1-203ENST00000587062 GNAI3P08754 354 aa25.35■■□□□ 1.65
VAT1-203ENST00000587062 ANKRD44Q8N8A2 993 aa25.35■■□□□ 1.65
VAT1-203ENST00000587062 JMYQ8N9B5 988 aa25.35■■□□□ 1.65
VAT1-203ENST00000587062 HDAC9Q9UKV0 1011 aa25.35■■□□□ 1.65
VAT1-203ENST00000587062 SCN9AQ15858 1988 aa25.35■■□□□ 1.65
VAT1-203ENST00000587062 METTL24Q5JXM2 366 aa25.34■■□□□ 1.65
VAT1-203ENST00000587062 INTS3Q68E01 1043 aaKnown RBP25.34■■□□□ 1.65
VAT1-203ENST00000587062 ATF7IPQ6VMQ6 1270 aa25.34■■□□□ 1.65
VAT1-203ENST00000587062 PSME4Q14997 1843 aa25.34■■□□□ 1.65
VAT1-203ENST00000587062 SHTN1A0MZ66 631 aa25.33■■□□□ 1.65
VAT1-203ENST00000587062 ZNF280AP59817 542 aaPredicted RBP25.33■■□□□ 1.65
VAT1-203ENST00000587062 GTF2IP78347 998 aa25.33■■□□□ 1.65
VAT1-203ENST00000587062 DEFB115Q30KQ5 88 aa25.33■■□□□ 1.65
VAT1-203ENST00000587062 DACT2Q5SW24 774 aa25.33■■□□□ 1.65
VAT1-203ENST00000587062 MKRN1Q9UHC7 482 aaKnown RBP25.33■■□□□ 1.65
VAT1-203ENST00000587062 RIPOR2Q9Y4F9 1068 aa25.33■■□□□ 1.65
VAT1-203ENST00000587062 ZKSCAN2Q63HK3 967 aa25.32■■□□□ 1.64
VAT1-203ENST00000587062 VPS37DQ86XT2 251 aa25.32■■□□□ 1.64
VAT1-203ENST00000587062 SULF1Q8IWU6 871 aa25.32■■□□□ 1.64
VAT1-203ENST00000587062 GMLQ99445 158 aa25.32■■□□□ 1.64
VAT1-203ENST00000587062 GLIS2Q9BZE0 524 aaPredicted RBP25.32■■□□□ 1.64
VAT1-203ENST00000587062 PUS3Q9BZE2 481 aaKnown RBP25.32■■□□□ 1.64
VAT1-203ENST00000587062 MYOZ2Q9NPC6 264 aa25.32■■□□□ 1.64
VAT1-203ENST00000587062 BCAR3O75815 825 aa25.31■■□□□ 1.64
VAT1-203ENST00000587062 CAVIN4Q5BKX8 364 aa25.31■■□□□ 1.64
VAT1-203ENST00000587062 KRT26Q7Z3Y9 468 aa25.31■■□□□ 1.64
VAT1-203ENST00000587062 FBXO3Q9UK99 471 aa25.31■■□□□ 1.64
VAT1-203ENST00000587062 IL1R1P14778 569 aa25.3■■□□□ 1.64
VAT1-203ENST00000587062 KLRK1P26718 216 aa25.3■■□□□ 1.64
VAT1-203ENST00000587062 CNTNAP1P78357 1384 aa25.3■■□□□ 1.64
VAT1-203ENST00000587062 SNAP23O00161 211 aa25.29■■□□□ 1.64
VAT1-203ENST00000587062 TRAF5O00463 557 aa25.29■■□□□ 1.64
VAT1-203ENST00000587062 PDE8BO95263 885 aa25.29■■□□□ 1.64
VAT1-203ENST00000587062 CELF2O95319 508 aaKnown RBP25.29■■□□□ 1.64
VAT1-203ENST00000587062 HIBADHP31937 336 aaKnown RBP25.29■■□□□ 1.64
VAT1-203ENST00000587062 SCARF1Q14162 830 aa25.29■■□□□ 1.64
VAT1-203ENST00000587062 USP48Q86UV5 1035 aa25.29■■□□□ 1.64
VAT1-203ENST00000587062 TRPM7Q96QT4 1865 aa25.28■■□□□ 1.64
VAT1-203ENST00000587062 TRIM27P14373 513 aa25.28■■□□□ 1.64
VAT1-203ENST00000587062 ZNF408Q9H9D4 720 aa25.28■■□□□ 1.64
VAT1-203ENST00000587062 LRRFIP2Q9Y608 721 aaKnown RBP25.28■■□□□ 1.64
VAT1-203ENST00000587062 RASSF10A6NK89 507 aa25.27■■□□□ 1.64
VAT1-203ENST00000587062 EYA2O00167 538 aa25.27■■□□□ 1.64
VAT1-203ENST00000587062 SASH1O94885 1247 aa25.27■■□□□ 1.64
VAT1-203ENST00000587062 IFIT1P09914 478 aaKnown RBP25.27■■□□□ 1.64
VAT1-203ENST00000587062 ECE1P42892 770 aa25.27■■□□□ 1.64
VAT1-203ENST00000587062 FKBP1AP62942 108 aaKnown RBP25.27■■□□□ 1.64
VAT1-203ENST00000587062 LRRC24Q50LG9 513 aa25.27■■□□□ 1.64
VAT1-203ENST00000587062 GGA3Q9NZ52 723 aa25.27■■□□□ 1.64
VAT1-203ENST00000587062 FRAT2O75474 233 aaPredicted RBP25.26■■□□□ 1.63
VAT1-203ENST00000587062 PAXIP1Q6ZW49 1069 aaPredicted RBP25.26■■□□□ 1.63
VAT1-203ENST00000587062 FTSJ3Q8IY81 847 aaKnown RBP25.26■■□□□ 1.63
VAT1-203ENST00000587062 MEIS3Q99687 375 aa25.26■■□□□ 1.63
VAT1-203ENST00000587062 IRS2Q9Y4H2 1338 aa25.26■■□□□ 1.63
VAT1-203ENST00000587062 A0A1B0GUL6 1792 aa25.26■■□□□ 1.63
VAT1-203ENST00000587062 CEP350Q5VT06 3117 aa25.26■■□□□ 1.63
VAT1-203ENST00000587062 EGFRP00533 1210 aa25.25■■□□□ 1.63
VAT1-203ENST00000587062 CST9Q5W186 159 aa25.25■■□□□ 1.63
VAT1-203ENST00000587062 KIAA0825Q8IV33 1275 aa25.25■■□□□ 1.63
VAT1-203ENST00000587062 KLHDC4Q8TBB5 520 aa25.25■■□□□ 1.63
VAT1-203ENST00000587062 CLUAP1Q96AJ1 413 aa25.25■■□□□ 1.63
VAT1-203ENST00000587062 TLL2Q9Y6L7 1015 aa25.25■■□□□ 1.63
VAT1-203ENST00000587062 PITPNM2Q9BZ72 1349 aa25.25■■□□□ 1.63
VAT1-203ENST00000587062 PTPN12Q05209 780 aaKnown RBP25.24■■□□□ 1.63
VAT1-203ENST00000587062 PUM3Q15397 648 aaKnown RBP25.24■■□□□ 1.63
VAT1-203ENST00000587062 ANGEL2Q5VTE6 544 aaKnown RBP25.24■■□□□ 1.63
VAT1-203ENST00000587062 MXD3Q9BW11 206 aa25.24■■□□□ 1.63
VAT1-203ENST00000587062 CEP126Q9P2H0 1117 aa25.24■■□□□ 1.63
VAT1-203ENST00000587062 CIAO1O76071 339 aa25.23■■□□□ 1.63
VAT1-203ENST00000587062 GNAI2P04899 355 aa25.23■■□□□ 1.63
VAT1-203ENST00000587062 GYG1P46976 350 aa25.23■■□□□ 1.63
VAT1-203ENST00000587062 RFX5P48382 616 aaPredicted RBP25.23■■□□□ 1.63
VAT1-203ENST00000587062 FMR1Q06787 632 aaKnown RBP eCLIP25.23■■□□□ 1.632e-11■□□□□ 10.9
VAT1-203ENST00000587062 C2orf69Q8N8R5 385 aa25.23■■□□□ 1.63
VAT1-203ENST00000587062 TDRD7Q8NHU6 1098 aaKnown RBP25.23■■□□□ 1.63
VAT1-203ENST00000587062 FAM84BQ96KN1 310 aaPredicted RBP25.23■■□□□ 1.63
VAT1-203ENST00000587062 MS4A1P11836 297 aa25.22■■□□□ 1.63
VAT1-203ENST00000587062 SLC5A1P13866 664 aa25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms