RNA–Protein interactions for RNA: ENST00000586577.1

CNN1-205, Transcript of calponin 1, humanhuman

TSL 3

Gene CNN1, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-205ENST00000586577 HNRNPUQ00839 825 aaKnown RBP eCLIP16.34■□□□□ 0.21
CNN1-205ENST00000586577 HABP4Q5JVS0 413 aaKnown RBP16.34■□□□□ 0.21
CNN1-205ENST00000586577 PSMD14O00487 310 aa16.33■□□□□ 0.2
CNN1-205ENST00000586577 FKBP1BP68106 108 aa16.33■□□□□ 0.2
CNN1-205ENST00000586577 GPSM2P81274 684 aa16.33■□□□□ 0.2
CNN1-205ENST00000586577 WASHC4Q2M389 1173 aa16.33■□□□□ 0.2
CNN1-205ENST00000586577 CCDC152Q4G0S7 254 aa16.33■□□□□ 0.2
CNN1-205ENST00000586577 EPHA10Q5JZY3 1008 aa16.33■□□□□ 0.2
CNN1-205ENST00000586577 RBM26Q5T8P6 1007 aaKnown RBP16.33■□□□□ 0.2
CNN1-205ENST00000586577 DLK2Q6UY11 383 aa16.33■□□□□ 0.2
CNN1-205ENST00000586577 PLA2G12BQ9BX93 195 aa16.33■□□□□ 0.2
CNN1-205ENST00000586577 A0A1B0GUL6 1792 aa16.32■□□□□ 0.2
CNN1-205ENST00000586577 FBXO46Q6PJ61 603 aaPredicted RBP16.32■□□□□ 0.2
CNN1-205ENST00000586577 SLC4A10Q6U841 1118 aa16.32■□□□□ 0.2
CNN1-205ENST00000586577 RASAL3Q86YV0 1011 aa16.32■□□□□ 0.2
CNN1-205ENST00000586577 RTL9Q8NET4 1388 aa16.32■□□□□ 0.2
CNN1-205ENST00000586577 ZNF296Q8WUU4 475 aaPredicted RBP16.32■□□□□ 0.2
CNN1-205ENST00000586577 POLLQ9UGP5 575 aa16.32■□□□□ 0.2
CNN1-205ENST00000586577 WTIPA6NIX2 430 aaPredicted RBP16.31■□□□□ 0.2
CNN1-205ENST00000586577 FOXO4P98177 505 aa16.31■□□□□ 0.2
CNN1-205ENST00000586577 KIF4BQ2VIQ3 1234 aa16.31■□□□□ 0.2
CNN1-205ENST00000586577 ALDH1L2Q3SY69 923 aa16.31■□□□□ 0.2
CNN1-205ENST00000586577 CSF1RP07333 972 aa16.3■□□□□ 0.2
CNN1-205ENST00000586577 HSP90B1P14625 803 aaKnown RBP16.3■□□□□ 0.2
CNN1-205ENST00000586577 NOM1Q5C9Z4 860 aaKnown RBP16.3■□□□□ 0.2
CNN1-205ENST00000586577 CDCA5Q96FF9 252 aa16.3■□□□□ 0.2
CNN1-205ENST00000586577 KAZALD1Q96I82 304 aa16.3■□□□□ 0.2
CNN1-205ENST00000586577 EYA3Q99504 573 aa16.3■□□□□ 0.2
CNN1-205ENST00000586577 SMC4Q9NTJ3 1288 aa16.3■□□□□ 0.2
CNN1-205ENST00000586577 GGA3Q9NZ52 723 aa16.3■□□□□ 0.2
CNN1-205ENST00000586577 NSFL1CQ9UNZ2 370 aaKnown RBP16.3■□□□□ 0.2
CNN1-205ENST00000586577 SCN9AQ15858 1988 aa16.29■□□□□ 0.2
CNN1-205ENST00000586577 PTPRCP08575 1304 aa16.29■□□□□ 0.2
CNN1-205ENST00000586577 GRM8O00222 908 aa16.29■□□□□ 0.2
CNN1-205ENST00000586577 ALDH1L1O75891 902 aa16.29■□□□□ 0.2
CNN1-205ENST00000586577 NBPF7P0C2Y1 421 aaPredicted RBP16.29■□□□□ 0.2
CNN1-205ENST00000586577 RARSP54136 660 aaKnown RBP16.29■□□□□ 0.2
CNN1-205ENST00000586577 SRCIN1Q9C0H9 1055 aa16.29■□□□□ 0.2
CNN1-205ENST00000586577 DBNDD1Q9H9R9 158 aa16.29■□□□□ 0.2
CNN1-205ENST00000586577 TBC1D8O95759 1140 aa16.28■□□□□ 0.2
CNN1-205ENST00000586577 EGFRP00533 1210 aa16.28■□□□□ 0.2
CNN1-205ENST00000586577 ANKRD18AQ8IVF6 992 aa16.28■□□□□ 0.2
CNN1-205ENST00000586577 TBC1D16Q8TBP0 767 aa16.28■□□□□ 0.2
CNN1-205ENST00000586577 SUCLG2Q96I99 432 aa16.28■□□□□ 0.2
CNN1-205ENST00000586577 C6orf229H3BNL8 230 aa16.27■□□□□ 0.2
CNN1-205ENST00000586577 GPR25O00155 361 aa16.27■□□□□ 0.2
CNN1-205ENST00000586577 ECE2O60344 883 aa16.27■□□□□ 0.2
CNN1-205ENST00000586577 CT47B1P0C2W7 299 aaPredicted RBP16.27■□□□□ 0.2
CNN1-205ENST00000586577 ITGA6P23229 1130 aa16.27■□□□□ 0.2
CNN1-205ENST00000586577 PODXL2Q9NZ53 605 aa16.27■□□□□ 0.2
CNN1-205ENST00000586577 NOB1Q9ULX3 412 aaKnown RBP16.27■□□□□ 0.2
CNN1-205ENST00000586577 PAPPA2Q9BXP8 1791 aa16.27■□□□□ 0.2
CNN1-205ENST00000586577 ZNF646O15015 1829 aaPredicted RBP16.26■□□□□ 0.19
CNN1-205ENST00000586577 UTYO14607 1347 aa16.26■□□□□ 0.19
CNN1-205ENST00000586577 G3V3G9 751 aa16.26■□□□□ 0.19
CNN1-205ENST00000586577 RIMBP2O15034 1052 aa16.26■□□□□ 0.19
CNN1-205ENST00000586577 DCAF8Q5TAQ9 597 aa16.26■□□□□ 0.19
CNN1-205ENST00000586577 INTS3Q68E01 1043 aaKnown RBP16.26■□□□□ 0.19
CNN1-205ENST00000586577 MINPP1Q9UNW1 487 aa16.26■□□□□ 0.19
CNN1-205ENST00000586577 TNNQ9UQP3 1299 aa16.26■□□□□ 0.19
CNN1-205ENST00000586577 ZBED9Q6R2W3 1325 aa16.25■□□□□ 0.19
CNN1-205ENST00000586577 FKTNO75072 461 aa16.25■□□□□ 0.19
CNN1-205ENST00000586577 SREBF2Q12772 1141 aa16.25■□□□□ 0.19
CNN1-205ENST00000586577 LMBR1LQ6UX01 489 aa16.25■□□□□ 0.19
CNN1-205ENST00000586577 CDC5LQ99459 802 aaKnown RBP16.25■□□□□ 0.19
CNN1-205ENST00000586577 KCNQ5Q9NR82 932 aa16.25■□□□□ 0.19
CNN1-205ENST00000586577 BSDC1Q9NW68 430 aaPredicted RBP16.25■□□□□ 0.19
CNN1-205ENST00000586577 C9orf78Q9NZ63 289 aaPredicted RBP16.25■□□□□ 0.19
CNN1-205ENST00000586577 BCAR3O75815 825 aa16.24■□□□□ 0.19
CNN1-205ENST00000586577 UFL1O94874 794 aa16.24■□□□□ 0.19
CNN1-205ENST00000586577 VIL1P09327 827 aaKnown RBP16.24■□□□□ 0.19
CNN1-205ENST00000586577 TM4SF4P48230 202 aa16.24■□□□□ 0.19
CNN1-205ENST00000586577 DOK7Q18PE1 504 aa16.24■□□□□ 0.19
CNN1-205ENST00000586577 ANGEL2Q5VTE6 544 aaKnown RBP16.24■□□□□ 0.19
CNN1-205ENST00000586577 ZNF594Q96JF6 807 aaPredicted RBP16.24■□□□□ 0.19
CNN1-205ENST00000586577 ZC3H12CQ9C0D7 883 aaKnown RBP16.24■□□□□ 0.19
CNN1-205ENST00000586577 USP44Q9H0E7 712 aa16.24■□□□□ 0.19
CNN1-205ENST00000586577 PSME4Q14997 1843 aa16.24■□□□□ 0.19
CNN1-205ENST00000586577 PITPNM2Q9BZ72 1349 aa16.23■□□□□ 0.19
CNN1-205ENST00000586577 SCARF1Q14162 830 aa16.23■□□□□ 0.19
CNN1-205ENST00000586577 ANKRD44Q8N8A2 993 aa16.23■□□□□ 0.19
CNN1-205ENST00000586577 ANKIB1Q9P2G1 1089 aa16.23■□□□□ 0.19
CNN1-205ENST00000586577 GGA1Q9UJY5 639 aa16.23■□□□□ 0.19
CNN1-205ENST00000586577 XDHP47989 1333 aa16.22■□□□□ 0.19
CNN1-205ENST00000586577 SNAP23O00161 211 aa16.22■□□□□ 0.19
CNN1-205ENST00000586577 KLRK1P26718 216 aa16.22■□□□□ 0.19
CNN1-205ENST00000586577 NF2P35240 595 aa16.22■□□□□ 0.19
CNN1-205ENST00000586577 TTLL12Q14166 644 aaPredicted RBP16.22■□□□□ 0.19
CNN1-205ENST00000586577 AGBL3Q8NEM8 1001 aa16.22■□□□□ 0.19
CNN1-205ENST00000586577 CFHR5Q9BXR6 569 aa16.22■□□□□ 0.19
CNN1-205ENST00000586577 BICC1Q9H694 974 aaKnown RBP16.22■□□□□ 0.19
CNN1-205ENST00000586577 CHMP3Q9Y3E7 222 aa16.22■□□□□ 0.19
CNN1-205ENST00000586577 KIAA0100Q14667 2235 aaKnown RBP16.21■□□□□ 0.19
CNN1-205ENST00000586577 ANKRD18BA2A2Z9 1011 aa16.21■□□□□ 0.19
CNN1-205ENST00000586577 ALDH1A1P00352 501 aa16.21■□□□□ 0.19
CNN1-205ENST00000586577 IGHMBP2P38935 993 aaKnown RBP16.21■□□□□ 0.19
CNN1-205ENST00000586577 ZNF280AP59817 542 aaPredicted RBP16.21■□□□□ 0.19
CNN1-205ENST00000586577 TXNRD3Q86VQ6 643 aa16.21■□□□□ 0.19
CNN1-205ENST00000586577 UBE2Q2LH0YL09 131 aa16.2■□□□□ 0.18
CNN1-205ENST00000586577 CCT4P50991 539 aaKnown RBP16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms