RNA–Protein interactions for RNA: ENST00000586477.1

ATG4D-205, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 628 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-205ENST00000586477 CRBNQ96SW2 442 aa20.09■□□□□ 0.81
ATG4D-205ENST00000586477 MEIS3Q99687 375 aa20.09■□□□□ 0.81
ATG4D-205ENST00000586477 NBPF7P0C2Y1 421 aaPredicted RBP20.08■□□□□ 0.81
ATG4D-205ENST00000586477 ATP2B4P23634 1241 aa20.08■□□□□ 0.81
ATG4D-205ENST00000586477 TRPM7Q96QT4 1865 aa20.07■□□□□ 0.8
ATG4D-205ENST00000586477 EGFRP00533 1210 aa20.07■□□□□ 0.8
ATG4D-205ENST00000586477 ERICH6BQ5W0A0 696 aa20.07■□□□□ 0.8
ATG4D-205ENST00000586477 LMBR1LQ6UX01 489 aa20.07■□□□□ 0.8
ATG4D-205ENST00000586477 TXNRD3Q86VQ6 643 aa20.07■□□□□ 0.8
ATG4D-205ENST00000586477 SUCLG2Q96I99 432 aa20.07■□□□□ 0.8
ATG4D-205ENST00000586477 ZBTB40Q9NUA8 1239 aa20.07■□□□□ 0.8
ATG4D-205ENST00000586477 CNOT7Q9UIV1 285 aaKnown RBP20.07■□□□□ 0.8
ATG4D-205ENST00000586477 MED23Q9ULK4 1368 aa20.07■□□□□ 0.8
ATG4D-205ENST00000586477 POLR2AP24928 1970 aaKnown RBP20.06■□□□□ 0.8
ATG4D-205ENST00000586477 IRS2Q9Y4H2 1338 aa20.06■□□□□ 0.8
ATG4D-205ENST00000586477 VIL1P09327 827 aaKnown RBP20.06■□□□□ 0.8
ATG4D-205ENST00000586477 KLRK1P26718 216 aa20.06■□□□□ 0.8
ATG4D-205ENST00000586477 IGHMBP2P38935 993 aaKnown RBP20.06■□□□□ 0.8
ATG4D-205ENST00000586477 MICALL2Q8IY33 904 aa20.06■□□□□ 0.8
ATG4D-205ENST00000586477 DPF2Q92785 391 aa20.06■□□□□ 0.8
ATG4D-205ENST00000586477 MKRN1Q9UHC7 482 aaKnown RBP20.06■□□□□ 0.8
ATG4D-205ENST00000586477 PGAP2Q9UHJ9 254 aa20.06■□□□□ 0.8
ATG4D-205ENST00000586477 ZNF609O15014 1411 aa20.05■□□□□ 0.8
ATG4D-205ENST00000586477 ANKRD18BA2A2Z9 1011 aa20.05■□□□□ 0.8
ATG4D-205ENST00000586477 SNAP23O00161 211 aa20.05■□□□□ 0.8
ATG4D-205ENST00000586477 ZNF594Q96JF6 807 aaPredicted RBP20.05■□□□□ 0.8
ATG4D-205ENST00000586477 TRAF5O00463 557 aa20.04■□□□□ 0.8
ATG4D-205ENST00000586477 CHRNDQ07001 517 aa20.04■□□□□ 0.8
ATG4D-205ENST00000586477 TMEM88BA6NKF7 163 aa20.03■□□□□ 0.8
ATG4D-205ENST00000586477 IFIT5Q13325 482 aaKnown RBP20.03■□□□□ 0.8
ATG4D-205ENST00000586477 SAMD7Q7Z3H4 446 aa20.03■□□□□ 0.8
ATG4D-205ENST00000586477 RPAP2Q8IXW5 612 aaPredicted RBP20.03■□□□□ 0.8
ATG4D-205ENST00000586477 GMLQ99445 158 aa20.03■□□□□ 0.8
ATG4D-205ENST00000586477 LEMD3Q9Y2U8 911 aa20.03■□□□□ 0.8
ATG4D-205ENST00000586477 CHMP3Q9Y3E7 222 aa20.03■□□□□ 0.8
ATG4D-205ENST00000586477 LRRFIP2Q9Y608 721 aaKnown RBP20.03■□□□□ 0.8
ATG4D-205ENST00000586477 ZNF804BA4D1E1 1349 aa20.02■□□□□ 0.8
ATG4D-205ENST00000586477 HMMRO75330 724 aa20.02■□□□□ 0.8
ATG4D-205ENST00000586477 HSPA1AP0DMV8 641 aaKnown RBP20.02■□□□□ 0.8
ATG4D-205ENST00000586477 HSPA1BP0DMV9 641 aaKnown RBP20.02■□□□□ 0.8
ATG4D-205ENST00000586477 RPS12P25398 132 aaKnown RBP20.02■□□□□ 0.8
ATG4D-205ENST00000586477 IRX6P78412 446 aaPredicted RBP20.02■□□□□ 0.8
ATG4D-205ENST00000586477 ANKRD44Q8N8A2 993 aa20.02■□□□□ 0.8
ATG4D-205ENST00000586477 HELBQ8NG08 1087 aaPredicted RBP20.02■□□□□ 0.8
ATG4D-205ENST00000586477 MPHOSPH8Q99549 860 aa20.02■□□□□ 0.8
ATG4D-205ENST00000586477 CNTNAP1P78357 1384 aa20.01■□□□□ 0.79
ATG4D-205ENST00000586477 TAF5LO75529 589 aa20.01■□□□□ 0.79
ATG4D-205ENST00000586477 RABL6Q3YEC7 729 aaPredicted RBP20.01■□□□□ 0.79
ATG4D-205ENST00000586477 TBC1D10BQ4KMP7 808 aaPredicted RBP20.01■□□□□ 0.79
ATG4D-205ENST00000586477 CST9Q5W186 159 aa20.01■□□□□ 0.79
ATG4D-205ENST00000586477 RSBN1LQ6PCB5 846 aaPredicted RBP20.01■□□□□ 0.79
ATG4D-205ENST00000586477 PODNQ7Z5L7 613 aa20.01■□□□□ 0.79
ATG4D-205ENST00000586477 EXOC6Q8TAG9 804 aa20.01■□□□□ 0.79
ATG4D-205ENST00000586477 GLIS2Q9BZE0 524 aaPredicted RBP20.01■□□□□ 0.79
ATG4D-205ENST00000586477 ANKRD2Q9GZV1 360 aa20.01■□□□□ 0.79
ATG4D-205ENST00000586477 BICC1Q9H694 974 aaKnown RBP20.01■□□□□ 0.79
ATG4D-205ENST00000586477 H7C1D1 291 aa20■□□□□ 0.79
ATG4D-205ENST00000586477 MTX1Q13505 466 aa20■□□□□ 0.79
ATG4D-205ENST00000586477 COL13A1Q5TAT6 717 aaPredicted RBP20■□□□□ 0.79
ATG4D-205ENST00000586477 DLK2Q6UY11 383 aa20■□□□□ 0.79
ATG4D-205ENST00000586477 USP17L3A6NCW0 530 aa19.99■□□□□ 0.79
ATG4D-205ENST00000586477 USP17L4A6NCW7 530 aa19.99■□□□□ 0.79
ATG4D-205ENST00000586477 G3V3G9 751 aa19.99■□□□□ 0.79
ATG4D-205ENST00000586477 DCAF8Q5TAQ9 597 aa19.99■□□□□ 0.79
ATG4D-205ENST00000586477 USP17L1Q7RTZ2 530 aa19.99■□□□□ 0.79
ATG4D-205ENST00000586477 ZC3H15Q8WU90 426 aaKnown RBP19.99■□□□□ 0.79
ATG4D-205ENST00000586477 MXD3Q9BW11 206 aa19.99■□□□□ 0.79
ATG4D-205ENST00000586477 PUS3Q9BZE2 481 aaKnown RBP19.99■□□□□ 0.79
ATG4D-205ENST00000586477 ZNF280AP59817 542 aaPredicted RBP19.98■□□□□ 0.79
ATG4D-205ENST00000586477 CCDC57Q2TAC2 916 aa19.98■□□□□ 0.79
ATG4D-205ENST00000586477 DACT2Q5SW24 774 aa19.98■□□□□ 0.79
ATG4D-205ENST00000586477 AGBL3Q8NEM8 1001 aa19.98■□□□□ 0.79
ATG4D-205ENST00000586477 ASTN2O75129 1339 aaPredicted RBP19.98■□□□□ 0.79
ATG4D-205ENST00000586477 C15orf52Q6ZUT6 534 aaKnown RBP19.97■□□□□ 0.79
ATG4D-205ENST00000586477 COA1Q9GZY4 146 aa19.97■□□□□ 0.79
ATG4D-205ENST00000586477 RASSF10A6NK89 507 aa19.96■□□□□ 0.79
ATG4D-205ENST00000586477 SRGAP3O43295 1099 aa19.96■□□□□ 0.79
ATG4D-205ENST00000586477 ATP8B2P98198 1209 aa19.96■□□□□ 0.79
ATG4D-205ENST00000586477 RBM26Q5T8P6 1007 aaKnown RBP19.96■□□□□ 0.79
ATG4D-205ENST00000586477 CEP85Q6P2H3 762 aa19.96■□□□□ 0.79
ATG4D-205ENST00000586477 LDHAL6AQ6ZMR3 332 aa19.96■□□□□ 0.79
ATG4D-205ENST00000586477 C1orf115Q9H7X2 142 aa19.96■□□□□ 0.79
ATG4D-205ENST00000586477 VEGFBP49765 207 aa19.95■□□□□ 0.78
ATG4D-205ENST00000586477 KIF4BQ2VIQ3 1234 aa19.95■□□□□ 0.78
ATG4D-205ENST00000586477 DEFB115Q30KQ5 88 aa19.95■□□□□ 0.78
ATG4D-205ENST00000586477 TAF7LQ5H9L4 462 aa19.95■□□□□ 0.78
ATG4D-205ENST00000586477 STRIP1Q5VSL9 837 aa19.94■□□□□ 0.78
ATG4D-205ENST00000586477 USP48Q86UV5 1035 aa19.94■□□□□ 0.78
ATG4D-205ENST00000586477 TNS4Q8IZW8 715 aa19.94■□□□□ 0.78
ATG4D-205ENST00000586477 CD209Q9NNX6 404 aa19.94■□□□□ 0.78
ATG4D-205ENST00000586477 FBXO3Q9UK99 471 aa19.94■□□□□ 0.78
ATG4D-205ENST00000586477 ABT1Q9ULW3 272 aaKnown RBP19.94■□□□□ 0.78
ATG4D-205ENST00000586477 RIPOR2Q9Y4F9 1068 aa19.94■□□□□ 0.78
ATG4D-205ENST00000586477 KCNJ4P48050 445 aa19.93■□□□□ 0.78
ATG4D-205ENST00000586477 LRRC24Q50LG9 513 aa19.93■□□□□ 0.78
ATG4D-205ENST00000586477 HSP90AB4PQ58FF6 505 aa19.93■□□□□ 0.78
ATG4D-205ENST00000586477 CDC37L1Q7L3B6 337 aa19.93■□□□□ 0.78
ATG4D-205ENST00000586477 KLHDC4Q8TBB5 520 aa19.93■□□□□ 0.78
ATG4D-205ENST00000586477 SSH3Q8TE77 659 aa19.93■□□□□ 0.78
ATG4D-205ENST00000586477 RWDD1Q9H446 243 aaPredicted RBP19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms