RNA–Protein interactions for RNA: ENST00000586407.1

LIG3-208, Transcript of DNA ligase 3, humanhuman

TSL 5

Gene LIG3, Length 815 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-208ENST00000586407 ANKRD44Q8N8A2 993 aa35.43■■■■□ 3.26
LIG3-208ENST00000586407 JMYQ8N9B5 988 aa35.43■■■■□ 3.26
LIG3-208ENST00000586407 FBXW7Q969H0 707 aa35.43■■■■□ 3.26
LIG3-208ENST00000586407 MXD3Q9BW11 206 aa35.43■■■■□ 3.26
LIG3-208ENST00000586407 PLIN1O60240 522 aa35.42■■■■□ 3.26
LIG3-208ENST00000586407 LDHAL6AQ6ZMR3 332 aa35.42■■■■□ 3.26
LIG3-208ENST00000586407 CNNM1Q9NRU3 951 aa35.42■■■■□ 3.26
LIG3-208ENST00000586407 USP17L3A6NCW0 530 aa35.41■■■■□ 3.26
LIG3-208ENST00000586407 USP17L4A6NCW7 530 aa35.41■■■■□ 3.26
LIG3-208ENST00000586407 USP17L1Q7RTZ2 530 aa35.41■■■■□ 3.26
LIG3-208ENST00000586407 PUS3Q9BZE2 481 aaKnown RBP35.41■■■■□ 3.26
LIG3-208ENST00000586407 PGAP2Q9UHJ9 254 aa35.4■■■■□ 3.26
LIG3-208ENST00000586407 DLK2Q6UY11 383 aa35.39■■■■□ 3.26
LIG3-208ENST00000586407 COA1Q9GZY4 146 aa35.39■■■■□ 3.26
LIG3-208ENST00000586407 IRS2Q9Y4H2 1338 aa35.38■■■■□ 3.25
LIG3-208ENST00000586407 RABL6Q3YEC7 729 aaPredicted RBP35.38■■■■□ 3.25
LIG3-208ENST00000586407 CNTNAP1P78357 1384 aa35.38■■■■□ 3.25
LIG3-208ENST00000586407 ASTN2O75129 1339 aaPredicted RBP35.37■■■■□ 3.25
LIG3-208ENST00000586407 KIF4BQ2VIQ3 1234 aa35.37■■■■□ 3.25
LIG3-208ENST00000586407 AGBL3Q8NEM8 1001 aa35.37■■■■□ 3.25
LIG3-208ENST00000586407 GMLQ99445 158 aa35.37■■■■□ 3.25
LIG3-208ENST00000586407 ZNF609O15014 1411 aa35.37■■■■□ 3.25
LIG3-208ENST00000586407 BRPF1P55201 1214 aaPredicted RBP35.36■■■■□ 3.25
LIG3-208ENST00000586407 ZC3H15Q8WU90 426 aaKnown RBP35.36■■■■□ 3.25
LIG3-208ENST00000586407 ABT1Q9ULW3 272 aaKnown RBP35.36■■■■□ 3.25
LIG3-208ENST00000586407 DACT2Q5SW24 774 aa35.35■■■■□ 3.25
LIG3-208ENST00000586407 CST9Q5W186 159 aa35.35■■■■□ 3.25
LIG3-208ENST00000586407 API5Q9BZZ5 524 aaKnown RBP35.35■■■■□ 3.25
LIG3-208ENST00000586407 USP48Q86UV5 1035 aa35.34■■■■□ 3.25
LIG3-208ENST00000586407 KLHDC4Q8TBB5 520 aa35.34■■■■□ 3.25
LIG3-208ENST00000586407 USP17L8P0C7I0 530 aa35.32■■■■□ 3.24
LIG3-208ENST00000586407 ZNF280AP59817 542 aaPredicted RBP35.32■■■■□ 3.24
LIG3-208ENST00000586407 ZNF408Q9H9D4 720 aa35.32■■■■□ 3.24
LIG3-208ENST00000586407 CD209Q9NNX6 404 aa35.32■■■■□ 3.24
LIG3-208ENST00000586407 TNNQ9UQP3 1299 aa35.32■■■■□ 3.24
LIG3-208ENST00000586407 BCAR3O75815 825 aa35.31■■■■□ 3.24
LIG3-208ENST00000586407 VEGFBP49765 207 aa35.31■■■■□ 3.24
LIG3-208ENST00000586407 LRRC24Q50LG9 513 aa35.31■■■■□ 3.24
LIG3-208ENST00000586407 KIF16BQ96L93 1317 aa35.31■■■■□ 3.24
LIG3-208ENST00000586407 CELF2O95319 508 aaKnown RBP35.3■■■■□ 3.24
LIG3-208ENST00000586407 GTF2IP78347 998 aa35.3■■■■□ 3.24
LIG3-208ENST00000586407 STRIP1Q5VSL9 837 aa35.3■■■■□ 3.24
LIG3-208ENST00000586407 CDC37L1Q7L3B6 337 aa35.3■■■■□ 3.24
LIG3-208ENST00000586407 GGA3Q9NZ52 723 aa35.3■■■■□ 3.24
LIG3-208ENST00000586407 ADM5C9JUS6 153 aa35.29■■■■□ 3.24
LIG3-208ENST00000586407 TTLL5Q6EMB2 1281 aa35.29■■■■□ 3.24
LIG3-208ENST00000586407 C15orf52Q6ZUT6 534 aaKnown RBP35.29■■■■□ 3.24
LIG3-208ENST00000586407 RIPOR2Q9Y4F9 1068 aa35.29■■■■□ 3.24
LIG3-208ENST00000586407 KRT26Q7Z3Y9 468 aa35.28■■■■□ 3.24
LIG3-208ENST00000586407 MYOZ2Q9NPC6 264 aa35.28■■■■□ 3.24
LIG3-208ENST00000586407 RASSF10A6NK89 507 aa35.27■■■■□ 3.24
LIG3-208ENST00000586407 UBTFL1P0CB47 393 aaPredicted RBP35.27■■■■□ 3.24
LIG3-208ENST00000586407 DEFB115Q30KQ5 88 aa35.27■■■■□ 3.24
LIG3-208ENST00000586407 JAG2Q9Y219 1238 aa35.27■■■■□ 3.24
LIG3-208ENST00000586407 SCARF1Q14162 830 aa35.26■■■■□ 3.24
LIG3-208ENST00000586407 ZNF804AQ7Z570 1209 aa35.26■■■■□ 3.24
LIG3-208ENST00000586407 FRAT1Q92837 279 aaPredicted RBP35.26■■■■□ 3.24
LIG3-208ENST00000586407 DCPSQ96C86 337 aaKnown RBP35.26■■■■□ 3.24
LIG3-208ENST00000586407 MEIS3Q99687 375 aa35.25■■■■□ 3.23
LIG3-208ENST00000586407 HSPA1AP0DMV8 641 aaKnown RBP35.24■■■■□ 3.23
LIG3-208ENST00000586407 HSPA1BP0DMV9 641 aaKnown RBP35.24■■■■□ 3.23
LIG3-208ENST00000586407 ANGEL2Q5VTE6 544 aaKnown RBP35.24■■■■□ 3.23
LIG3-208ENST00000586407 PAXIP1Q6ZW49 1069 aaPredicted RBP35.24■■■■□ 3.23
LIG3-208ENST00000586407 KIAA0825Q8IV33 1275 aa35.24■■■■□ 3.23
LIG3-208ENST00000586407 SCAF8Q9UPN6 1271 aaKnown RBP35.24■■■■□ 3.23
LIG3-208ENST00000586407 LRRFIP2Q9Y608 721 aaKnown RBP35.24■■■■□ 3.23
LIG3-208ENST00000586407 GYG1P46976 350 aa35.23■■■■□ 3.23
LIG3-208ENST00000586407 RFX5P48382 616 aaPredicted RBP35.23■■■■□ 3.23
LIG3-208ENST00000586407 METTL24Q5JXM2 366 aa35.23■■■■□ 3.23
LIG3-208ENST00000586407 MROH5Q6ZUA9 1318 aa35.23■■■■□ 3.23
LIG3-208ENST00000586407 MYO3BQ8WXR4 1341 aa35.23■■■■□ 3.23
LIG3-208ENST00000586407 TRIM27P14373 513 aa35.22■■■■□ 3.23
LIG3-208ENST00000586407 GRM1Q13255 1194 aa35.22■■■■□ 3.23
LIG3-208ENST00000586407 CERS5Q8N5B7 392 aa35.22■■■■□ 3.23
LIG3-208ENST00000586407 ARHGAP45Q92619 1136 aa35.22■■■■□ 3.23
LIG3-208ENST00000586407 TLL2Q9Y6L7 1015 aa35.22■■■■□ 3.23
LIG3-208ENST00000586407 IL1R1P14778 569 aa35.21■■■■□ 3.23
LIG3-208ENST00000586407 UBE4AQ14139 1066 aa35.21■■■■□ 3.23
LIG3-208ENST00000586407 NBPF9Q3BBW0 867 aa35.21■■■■□ 3.23
LIG3-208ENST00000586407 CLUAP1Q96AJ1 413 aa35.2■■■■□ 3.23
LIG3-208ENST00000586407 ZBED9Q6R2W3 1325 aa35.2■■■■□ 3.23
LIG3-208ENST00000586407 SASH1O94885 1247 aa35.19■■■■□ 3.22
LIG3-208ENST00000586407 INTS3Q68E01 1043 aaKnown RBP35.19■■■■□ 3.22
LIG3-208ENST00000586407 CYP4F22Q6NT55 531 aa35.19■■■■□ 3.22
LIG3-208ENST00000586407 OGFOD1Q8N543 542 aa35.19■■■■□ 3.22
LIG3-208ENST00000586407 VGLL2Q8N8G2 317 aa35.19■■■■□ 3.22
LIG3-208ENST00000586407 WDR33Q9C0J8 1336 aaKnown RBP35.18■■■■□ 3.22
LIG3-208ENST00000586407 SULF1Q8IWU6 871 aa35.18■■■■□ 3.22
LIG3-208ENST00000586407 FAM84BQ96KN1 310 aaPredicted RBP35.18■■■■□ 3.22
LIG3-208ENST00000586407 PTPN12Q05209 780 aaKnown RBP35.17■■■■□ 3.22
LIG3-208ENST00000586407 ATF7IPQ6VMQ6 1270 aa35.17■■■■□ 3.22
LIG3-208ENST00000586407 SAPCD2Q86UD0 394 aa35.17■■■■□ 3.22
LIG3-208ENST00000586407 CAPNS2Q96L46 248 aa35.17■■■■□ 3.22
LIG3-208ENST00000586407 F8W031 263 aaPredicted RBP35.16■■■■□ 3.22
LIG3-208ENST00000586407 IPO8O15397 1037 aaKnown RBP35.16■■■■□ 3.22
LIG3-208ENST00000586407 EYA2O00167 538 aa35.15■■■■□ 3.22
LIG3-208ENST00000586407 SIL1Q9H173 461 aa35.15■■■■□ 3.22
LIG3-208ENST00000586407 IQSEC3Q9UPP2 1182 aaPredicted RBP35.15■■■■□ 3.22
LIG3-208ENST00000586407 WNT10BO00744 389 aa35.14■■■■□ 3.22
LIG3-208ENST00000586407 PDE8BO95263 885 aa35.14■■■■□ 3.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms