RNA–Protein interactions for RNA: ENST00000586245.5

VMP1-203, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-203ENST00000586245 FER1L6Q2WGJ9 1857 aa16.77■□□□□ 0.27
VMP1-203ENST00000586245 DUOX1Q9NRD9 1551 aa16.77■□□□□ 0.27
VMP1-203ENST00000586245 MED23Q9ULK4 1368 aa16.77■□□□□ 0.27
VMP1-203ENST00000586245 A0A1B0GUL7 405 aa16.76■□□□□ 0.27
VMP1-203ENST00000586245 WTIPA6NIX2 430 aaPredicted RBP16.76■□□□□ 0.27
VMP1-203ENST00000586245 G3V3G9 751 aa16.76■□□□□ 0.27
VMP1-203ENST00000586245 RIMBP2O15034 1052 aa16.76■□□□□ 0.27
VMP1-203ENST00000586245 PPIP5K2O43314 1243 aa16.76■□□□□ 0.27
VMP1-203ENST00000586245 IARSP41252 1262 aaKnown RBP16.76■□□□□ 0.27
VMP1-203ENST00000586245 DCAF8Q5TAQ9 597 aa16.76■□□□□ 0.27
VMP1-203ENST00000586245 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.76■□□□□ 0.27
VMP1-203ENST00000586245 ZNF609O15014 1411 aa16.76■□□□□ 0.27
VMP1-203ENST00000586245 SMARCA5O60264 1052 aaPredicted RBP16.75■□□□□ 0.27
VMP1-203ENST00000586245 TIMM10P62072 90 aa16.75■□□□□ 0.27
VMP1-203ENST00000586245 KIAA2012Q0VF49 1180 aa16.75■□□□□ 0.27
VMP1-203ENST00000586245 AOC3Q16853 763 aa16.75■□□□□ 0.27
VMP1-203ENST00000586245 CAVIN4Q5BKX8 364 aa16.75■□□□□ 0.27
VMP1-203ENST00000586245 GORABQ5T7V8 394 aa16.75■□□□□ 0.27
VMP1-203ENST00000586245 B4GALNT3Q6L9W6 998 aa16.75■□□□□ 0.27
VMP1-203ENST00000586245 C15orf52Q6ZUT6 534 aaKnown RBP16.75■□□□□ 0.27
VMP1-203ENST00000586245 CENPQQ7L2Z9 268 aaPredicted RBP16.75■□□□□ 0.27
VMP1-203ENST00000586245 AACSQ86V21 672 aa16.75■□□□□ 0.27
VMP1-203ENST00000586245 LARGE2Q8N3Y3 721 aa16.75■□□□□ 0.27
VMP1-203ENST00000586245 IFIT2P09913 472 aaKnown RBP16.74■□□□□ 0.27
VMP1-203ENST00000586245 LMNB1P20700 586 aa16.74■□□□□ 0.27
VMP1-203ENST00000586245 ZNF804AQ7Z570 1209 aa16.74■□□□□ 0.27
VMP1-203ENST00000586245 VPS37DQ86XT2 251 aa16.74■□□□□ 0.27
VMP1-203ENST00000586245 KLRK1P26718 216 aa16.73■□□□□ 0.27
VMP1-203ENST00000586245 JDP2Q8WYK2 163 aa16.73■□□□□ 0.27
VMP1-203ENST00000586245 EAF2Q96CJ1 260 aaPredicted RBP16.73■□□□□ 0.27
VMP1-203ENST00000586245 XAGE2Q96GT9 111 aa16.73■□□□□ 0.27
VMP1-203ENST00000586245 CCDC8Q9H0W5 538 aaPredicted RBP16.73■□□□□ 0.27
VMP1-203ENST00000586245 ADORA1P30542 326 aa16.72■□□□□ 0.27
VMP1-203ENST00000586245 HIBADHP31937 336 aaKnown RBP16.72■□□□□ 0.27
VMP1-203ENST00000586245 GYG1P46976 350 aa16.72■□□□□ 0.27
VMP1-203ENST00000586245 TXNRD3Q86VQ6 643 aa16.72■□□□□ 0.27
VMP1-203ENST00000586245 NIM1KQ8IY84 436 aa16.72■□□□□ 0.27
VMP1-203ENST00000586245 FAM84BQ96KN1 310 aaPredicted RBP16.72■□□□□ 0.27
VMP1-203ENST00000586245 COA1Q9GZY4 146 aa16.72■□□□□ 0.27
VMP1-203ENST00000586245 KDM2BQ8NHM5 1336 aa16.71■□□□□ 0.27
VMP1-203ENST00000586245 IRS2Q9Y4H2 1338 aa16.71■□□□□ 0.27
VMP1-203ENST00000586245 NUCB1Q02818 461 aa16.71■□□□□ 0.27
VMP1-203ENST00000586245 DOK7Q18PE1 504 aa16.71■□□□□ 0.27
VMP1-203ENST00000586245 CHD1LQ86WJ1 897 aa16.71■□□□□ 0.27
VMP1-203ENST00000586245 DBNDD2Q9BQY9 259 aa16.71■□□□□ 0.27
VMP1-203ENST00000586245 LNPKQ9C0E8 428 aa16.71■□□□□ 0.27
VMP1-203ENST00000586245 GNL3LQ9NVN8 582 aaKnown RBP16.71■□□□□ 0.27
VMP1-203ENST00000586245 RNF181Q9P0P0 153 aa16.71■□□□□ 0.27
VMP1-203ENST00000586245 FRAT2O75474 233 aaPredicted RBP16.7■□□□□ 0.26
VMP1-203ENST00000586245 BCAMP50895 628 aa16.7■□□□□ 0.26
VMP1-203ENST00000586245 CCDC158Q5M9N0 1113 aa16.7■□□□□ 0.26
VMP1-203ENST00000586245 CCDC102BQ68D86 513 aa16.7■□□□□ 0.26
VMP1-203ENST00000586245 FBXO33Q7Z6M2 555 aa16.7■□□□□ 0.26
VMP1-203ENST00000586245 DBNDD1Q9H9R9 158 aa16.7■□□□□ 0.26
VMP1-203ENST00000586245 TLR7Q9NYK1 1049 aaKnown RBP16.7■□□□□ 0.26
VMP1-203ENST00000586245 DBNLQ9UJU6 430 aaKnown RBP16.7■□□□□ 0.26
VMP1-203ENST00000586245 ECE2O60344 883 aa16.69■□□□□ 0.26
VMP1-203ENST00000586245 PRELPP51888 382 aa16.69■□□□□ 0.26
VMP1-203ENST00000586245 TTC39AQ5SRH9 613 aa16.69■□□□□ 0.26
VMP1-203ENST00000586245 C9orf131Q5VYM1 1079 aa16.69■□□□□ 0.26
VMP1-203ENST00000586245 GPATCH3Q96I76 525 aa16.69■□□□□ 0.26
VMP1-203ENST00000586245 CD209Q9NNX6 404 aa16.69■□□□□ 0.26
VMP1-203ENST00000586245 ARAP2Q8WZ64 1704 aa16.69■□□□□ 0.26
VMP1-203ENST00000586245 PHKA1P46020 1223 aa16.68■□□□□ 0.26
VMP1-203ENST00000586245 PODNQ7Z5L7 613 aa16.68■□□□□ 0.26
VMP1-203ENST00000586245 ZNRF3Q9ULT6 936 aa16.68■□□□□ 0.26
VMP1-203ENST00000586245 GTF3C3Q9Y5Q9 886 aa16.68■□□□□ 0.26
VMP1-203ENST00000586245 UTRNP46939 3433 aa16.68■□□□□ 0.26
VMP1-203ENST00000586245 UQCRFS1P1P0C7P4 283 aa16.67■□□□□ 0.26
VMP1-203ENST00000586245 IL1R1P14778 569 aa16.67■□□□□ 0.26
VMP1-203ENST00000586245 C16orf71Q8IYS4 520 aaPredicted RBP16.67■□□□□ 0.26
VMP1-203ENST00000586245 SEMA3EO15041 775 aa16.66■□□□□ 0.26
VMP1-203ENST00000586245 EIF6P56537 245 aaKnown RBP16.66■□□□□ 0.26
VMP1-203ENST00000586245 TDRD7Q8NHU6 1098 aaKnown RBP16.66■□□□□ 0.26
VMP1-203ENST00000586245 IQSEC3Q9UPP2 1182 aaPredicted RBP16.66■□□□□ 0.26
VMP1-203ENST00000586245 COL4A5P29400 1685 aa16.65■□□□□ 0.26
VMP1-203ENST00000586245 SBF1O95248 1867 aa16.65■□□□□ 0.26
VMP1-203ENST00000586245 ARID4AP29374 1257 aaPredicted RBP16.65■□□□□ 0.26
VMP1-203ENST00000586245 FBXW7Q969H0 707 aa16.65■□□□□ 0.26
VMP1-203ENST00000586245 ZNF512BQ96KM6 892 aaPredicted RBP16.65■□□□□ 0.26
VMP1-203ENST00000586245 ECHDC1Q9NTX5 307 aa16.65■□□□□ 0.26
VMP1-203ENST00000586245 DENND2AQ9ULE3 1009 aa16.65■□□□□ 0.26
VMP1-203ENST00000586245 CCDC88AQ3V6T2 1871 aa16.65■□□□□ 0.26
VMP1-203ENST00000586245 YDJCA8MPS7 323 aa16.64■□□□□ 0.25
VMP1-203ENST00000586245 FZD9O00144 591 aa16.64■□□□□ 0.25
VMP1-203ENST00000586245 MX1P20591 662 aa16.64■□□□□ 0.25
VMP1-203ENST00000586245 CHAF1AQ13111 956 aaPredicted RBP16.64■□□□□ 0.25
VMP1-203ENST00000586245 TTC41PQ6P2S7 1318 aa16.64■□□□□ 0.25
VMP1-203ENST00000586245 ZC3H4Q9UPT8 1303 aaKnown RBP16.64■□□□□ 0.25
VMP1-203ENST00000586245 DICER1Q9UPY3 1922 aaKnown RBP16.63■□□□□ 0.25
VMP1-203ENST00000586245 USP17L3A6NCW0 530 aa16.63■□□□□ 0.25
VMP1-203ENST00000586245 USP17L4A6NCW7 530 aa16.63■□□□□ 0.25
VMP1-203ENST00000586245 ERC2O15083 957 aa16.63■□□□□ 0.25
VMP1-203ENST00000586245 ZBTB22O15209 634 aa16.63■□□□□ 0.25
VMP1-203ENST00000586245 RAD17O75943 681 aa16.63■□□□□ 0.25
VMP1-203ENST00000586245 GTF2IP78347 998 aa16.63■□□□□ 0.25
VMP1-203ENST00000586245 RASGRF1Q13972 1273 aa16.63■□□□□ 0.25
VMP1-203ENST00000586245 TNIP1Q15025 636 aa16.63■□□□□ 0.25
VMP1-203ENST00000586245 TTLL5Q6EMB2 1281 aa16.63■□□□□ 0.25
VMP1-203ENST00000586245 CIAPIN1Q6FI81 312 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms