RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 MLLT1Q03111 559 aaPredicted RBP14.96□□□□□ -0.01
LIG3-207ENST00000586119 USP17L1Q7RTZ2 530 aa14.96□□□□□ -0.01
LIG3-207ENST00000586119 ZNF646O15015 1829 aaPredicted RBP14.95□□□□□ -0.02
LIG3-207ENST00000586119 UBE2Q2LH0YL09 131 aa14.95□□□□□ -0.02
LIG3-207ENST00000586119 H7C1W4 665 aa14.95□□□□□ -0.02
LIG3-207ENST00000586119 SLC4A2P04920 1241 aa14.95□□□□□ -0.02
LIG3-207ENST00000586119 PODNQ7Z5L7 613 aa14.95□□□□□ -0.02
LIG3-207ENST00000586119 FBXW7Q969H0 707 aa14.95□□□□□ -0.02
LIG3-207ENST00000586119 BSDC1Q9NW68 430 aaPredicted RBP14.95□□□□□ -0.02
LIG3-207ENST00000586119 SNAP23O00161 211 aa14.94□□□□□ -0.02
LIG3-207ENST00000586119 CCT4P50991 539 aaKnown RBP14.94□□□□□ -0.02
LIG3-207ENST00000586119 TWISTNBQ3B726 338 aaPredicted RBP14.94□□□□□ -0.02
LIG3-207ENST00000586119 DACT2Q5SW24 774 aa14.94□□□□□ -0.02
LIG3-207ENST00000586119 UBE3BQ7Z3V4 1068 aa14.94□□□□□ -0.02
LIG3-207ENST00000586119 RASAL3Q86YV0 1011 aa14.94□□□□□ -0.02
LIG3-207ENST00000586119 WWC1Q8IX03 1113 aa14.94□□□□□ -0.02
LIG3-207ENST00000586119 CDC5LQ99459 802 aaKnown RBP14.94□□□□□ -0.02
LIG3-207ENST00000586119 CASP7P55210 303 aa14.93□□□□□ -0.02
LIG3-207ENST00000586119 SALL2Q9Y467 1007 aaPredicted RBP14.93□□□□□ -0.02
LIG3-207ENST00000586119 STK31Q9BXU1 1019 aa14.92□□□□□ -0.02
LIG3-207ENST00000586119 ZNF609O15014 1411 aa14.92□□□□□ -0.02
LIG3-207ENST00000586119 MED23Q9ULK4 1368 aa14.91□□□□□ -0.02
LIG3-207ENST00000586119 WNT10BO00744 389 aa14.91□□□□□ -0.02
LIG3-207ENST00000586119 SASH1O94885 1247 aa14.91□□□□□ -0.02
LIG3-207ENST00000586119 ITGA6P23229 1130 aa14.91□□□□□ -0.02
LIG3-207ENST00000586119 NEXNQ0ZGT2 675 aa14.91□□□□□ -0.02
LIG3-207ENST00000586119 MKRN3Q13064 507 aaKnown RBP14.91□□□□□ -0.02
LIG3-207ENST00000586119 GCKRQ14397 625 aa14.91□□□□□ -0.02
LIG3-207ENST00000586119 SAGE1Q9NXZ1 904 aa14.91□□□□□ -0.02
LIG3-207ENST00000586119 FZD1Q9UP38 647 aa14.91□□□□□ -0.02
LIG3-207ENST00000586119 TBC1D8O95759 1140 aa14.9□□□□□ -0.02
LIG3-207ENST00000586119 SOX10P56693 466 aa14.9□□□□□ -0.02
LIG3-207ENST00000586119 PRKG1Q13976 671 aa14.9□□□□□ -0.02
LIG3-207ENST00000586119 TTLL5Q6EMB2 1281 aa14.9□□□□□ -0.02
LIG3-207ENST00000586119 HELBQ8NG08 1087 aaPredicted RBP14.9□□□□□ -0.02
LIG3-207ENST00000586119 COA1Q9GZY4 146 aa14.9□□□□□ -0.02
LIG3-207ENST00000586119 PCDHAC2Q9Y5I4 1007 aa14.9□□□□□ -0.02
LIG3-207ENST00000586119 ZNF804BA4D1E1 1349 aa14.9□□□□□ -0.02
LIG3-207ENST00000586119 PITPNM2Q9BZ72 1349 aa14.9□□□□□ -0.02
LIG3-207ENST00000586119 PAPPA2Q9BXP8 1791 aa14.89□□□□□ -0.03
LIG3-207ENST00000586119 TAF5LO75529 589 aa14.89□□□□□ -0.03
LIG3-207ENST00000586119 CSF1RP07333 972 aa14.89□□□□□ -0.03
LIG3-207ENST00000586119 IGHMBP2P38935 993 aaKnown RBP14.89□□□□□ -0.03
LIG3-207ENST00000586119 GTF2IP78347 998 aa14.89□□□□□ -0.03
LIG3-207ENST00000586119 FLIIQ13045 1269 aa14.89□□□□□ -0.03
LIG3-207ENST00000586119 CCDC27Q2M243 656 aa14.89□□□□□ -0.03
LIG3-207ENST00000586119 STRIP1Q5VSL9 837 aa14.89□□□□□ -0.03
LIG3-207ENST00000586119 KIAA0825Q8IV33 1275 aa14.89□□□□□ -0.03
LIG3-207ENST00000586119 PLA2G12BQ9BX93 195 aa14.89□□□□□ -0.03
LIG3-207ENST00000586119 LEMD3Q9Y2U8 911 aa14.89□□□□□ -0.03
LIG3-207ENST00000586119 VAMP4O75379 141 aa14.88□□□□□ -0.03
LIG3-207ENST00000586119 CHRNDQ07001 517 aa14.88□□□□□ -0.03
LIG3-207ENST00000586119 TTLL12Q14166 644 aaPredicted RBP14.88□□□□□ -0.03
LIG3-207ENST00000586119 DNAAF4Q8WXU2 420 aa14.88□□□□□ -0.03
LIG3-207ENST00000586119 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.88□□□□□ -0.03
LIG3-207ENST00000586119 F6X3S4 739 aa14.87□□□□□ -0.03
LIG3-207ENST00000586119 FKBP1BP68106 108 aa14.87□□□□□ -0.03
LIG3-207ENST00000586119 PTPN12Q05209 780 aaKnown RBP14.87□□□□□ -0.03
LIG3-207ENST00000586119 FKBP5Q13451 457 aaPredicted RBP14.87□□□□□ -0.03
LIG3-207ENST00000586119 OGFOD1Q8N543 542 aa14.87□□□□□ -0.03
LIG3-207ENST00000586119 CERS5Q8N5B7 392 aa14.87□□□□□ -0.03
LIG3-207ENST00000586119 MPHOSPH8Q99549 860 aa14.87□□□□□ -0.03
LIG3-207ENST00000586119 CHMP4AQ9BY43 222 aa14.87□□□□□ -0.03
LIG3-207ENST00000586119 R3HDMLQ9H3Y0 253 aa14.87□□□□□ -0.03
LIG3-207ENST00000586119 CD209Q9NNX6 404 aa14.87□□□□□ -0.03
LIG3-207ENST00000586119 SPINK5Q9NQ38 1064 aaPredicted RBP14.87□□□□□ -0.03
LIG3-207ENST00000586119 IRS2Q9Y4H2 1338 aa14.87□□□□□ -0.03
LIG3-207ENST00000586119 ZNF316A6NFI3 1004 aaPredicted RBP14.86□□□□□ -0.03
LIG3-207ENST00000586119 FOXO4P98177 505 aa14.86□□□□□ -0.03
LIG3-207ENST00000586119 EXOSC9Q06265 439 aaKnown RBP14.86□□□□□ -0.03
LIG3-207ENST00000586119 EPHA10Q5JZY3 1008 aa14.86□□□□□ -0.03
LIG3-207ENST00000586119 ZBED3Q96IU2 234 aaPredicted RBP14.86□□□□□ -0.03
LIG3-207ENST00000586119 JAG2Q9Y219 1238 aa14.86□□□□□ -0.03
LIG3-207ENST00000586119 AOX1Q06278 1338 aa14.86□□□□□ -0.03
LIG3-207ENST00000586119 FANCIQ9NVI1 1328 aa14.86□□□□□ -0.03
LIG3-207ENST00000586119 CACNA1FO60840 1977 aa14.85□□□□□ -0.03
LIG3-207ENST00000586119 TNRC18O15417 2968 aaPredicted RBP14.85□□□□□ -0.03
LIG3-207ENST00000586119 CTU1Q7Z7A3 348 aaKnown RBP14.85□□□□□ -0.03
LIG3-207ENST00000586119 LINS1Q8NG48 757 aa14.85□□□□□ -0.03
LIG3-207ENST00000586119 ZNF296Q8WUU4 475 aaPredicted RBP14.85□□□□□ -0.03
LIG3-207ENST00000586119 ZNF594Q96JF6 807 aaPredicted RBP14.85□□□□□ -0.03
LIG3-207ENST00000586119 ANKRD2Q9GZV1 360 aa14.85□□□□□ -0.03
LIG3-207ENST00000586119 ANKRD18BA2A2Z9 1011 aa14.84□□□□□ -0.03
LIG3-207ENST00000586119 F8W031 263 aaPredicted RBP14.84□□□□□ -0.03
LIG3-207ENST00000586119 SLC34A2O95436 690 aa14.84□□□□□ -0.03
LIG3-207ENST00000586119 KCNJ4P48050 445 aa14.84□□□□□ -0.03
LIG3-207ENST00000586119 TM4SF4P48230 202 aa14.84□□□□□ -0.03
LIG3-207ENST00000586119 CHMP3Q9Y3E7 222 aa14.84□□□□□ -0.03
LIG3-207ENST00000586119 IL16Q14005 1332 aa14.84□□□□□ -0.03
LIG3-207ENST00000586119 MYO3BQ8WXR4 1341 aa14.84□□□□□ -0.03
LIG3-207ENST00000586119 A0A1B0GUL6 1792 aa14.83□□□□□ -0.03
LIG3-207ENST00000586119 PLIN1O60240 522 aa14.83□□□□□ -0.04
LIG3-207ENST00000586119 BEND3Q5T5X7 828 aa14.83□□□□□ -0.04
LIG3-207ENST00000586119 REM2Q8IYK8 340 aaPredicted RBP14.83□□□□□ -0.04
LIG3-207ENST00000586119 MYH16Q9H6N6 1097 aa14.83□□□□□ -0.04
LIG3-207ENST00000586119 ANGEL1Q9UNK9 670 aaKnown RBP14.83□□□□□ -0.04
LIG3-207ENST00000586119 HPS5Q9UPZ3 1129 aa14.83□□□□□ -0.04
LIG3-207ENST00000586119 PDE4DIPQ5VU43 2346 aa14.82□□□□□ -0.04
LIG3-207ENST00000586119 LDLRAD1Q5T700 205 aa14.82□□□□□ -0.04
LIG3-207ENST00000586119 LMBR1LQ6UX01 489 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms