RNA–Protein interactions for RNA: ENST00000585967.5

MBD3-204, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 4

Gene MBD3, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-204ENST00000585967 ECM29Q5VYK3 1845 aa21.65■■□□□ 1.06
MBD3-204ENST00000585967 USP17L8P0C7I0 530 aa21.65■■□□□ 1.06
MBD3-204ENST00000585967 MMP14P50281 582 aa21.65■■□□□ 1.06
MBD3-204ENST00000585967 HUNKP57058 714 aa21.65■■□□□ 1.06
MBD3-204ENST00000585967 NOGQ13253 232 aa21.65■■□□□ 1.06
MBD3-204ENST00000585967 OGFOD1Q8N543 542 aa21.65■■□□□ 1.06
MBD3-204ENST00000585967 GGA3Q9NZ52 723 aa21.65■■□□□ 1.06
MBD3-204ENST00000585967 ANKRD18BA2A2Z9 1011 aa21.64■■□□□ 1.05
MBD3-204ENST00000585967 BRPF1P55201 1214 aaPredicted RBP21.64■■□□□ 1.05
MBD3-204ENST00000585967 ZNF280AP59817 542 aaPredicted RBP21.64■■□□□ 1.05
MBD3-204ENST00000585967 COA1Q9GZY4 146 aa21.64■■□□□ 1.05
MBD3-204ENST00000585967 GBA2Q9HCG7 927 aaPredicted RBP21.64■■□□□ 1.05
MBD3-204ENST00000585967 HSPA8P11142 646 aaKnown RBP21.63■■□□□ 1.05
MBD3-204ENST00000585967 FAM161AQ3B820 660 aa21.63■■□□□ 1.05
MBD3-204ENST00000585967 PAPPA2Q9BXP8 1791 aa21.63■■□□□ 1.05
MBD3-204ENST00000585967 ZNF804BA4D1E1 1349 aa21.62■■□□□ 1.05
MBD3-204ENST00000585967 PITPNM2Q9BZ72 1349 aa21.62■■□□□ 1.05
MBD3-204ENST00000585967 FBXW7Q969H0 707 aa21.62■■□□□ 1.05
MBD3-204ENST00000585967 MYOZ2Q9NPC6 264 aa21.62■■□□□ 1.05
MBD3-204ENST00000585967 CHMP3Q9Y3E7 222 aa21.62■■□□□ 1.05
MBD3-204ENST00000585967 EGFRP00533 1210 aa21.61■■□□□ 1.05
MBD3-204ENST00000585967 CSF1RP07333 972 aa21.61■■□□□ 1.05
MBD3-204ENST00000585967 IFIT5Q13325 482 aaKnown RBP21.61■■□□□ 1.05
MBD3-204ENST00000585967 STRIP1Q5VSL9 837 aa21.61■■□□□ 1.05
MBD3-204ENST00000585967 ADM5C9JUS6 153 aa21.6■■□□□ 1.05
MBD3-204ENST00000585967 AOC2O75106 756 aa21.6■■□□□ 1.05
MBD3-204ENST00000585967 CASP7P55210 303 aa21.6■■□□□ 1.05
MBD3-204ENST00000585967 CCDC102AQ96A19 550 aa21.6■■□□□ 1.05
MBD3-204ENST00000585967 SCARF1Q14162 830 aa21.59■■□□□ 1.05
MBD3-204ENST00000585967 TAF7LQ5H9L4 462 aa21.59■■□□□ 1.05
MBD3-204ENST00000585967 ANGEL2Q5VTE6 544 aaKnown RBP21.59■■□□□ 1.05
MBD3-204ENST00000585967 RGMBQ6NW40 437 aa21.59■■□□□ 1.05
MBD3-204ENST00000585967 C9orf78Q9NZ63 289 aaPredicted RBP21.59■■□□□ 1.05
MBD3-204ENST00000585967 HDAC9Q9UKV0 1011 aa21.59■■□□□ 1.05
MBD3-204ENST00000585967 CASP8AP2Q9UKL3 1982 aa21.59■■□□□ 1.05
MBD3-204ENST00000585967 FKBP1BP68106 108 aa21.58■■□□□ 1.05
MBD3-204ENST00000585967 BEND3Q5T5X7 828 aa21.58■■□□□ 1.05
MBD3-204ENST00000585967 GMLQ99445 158 aa21.58■■□□□ 1.05
MBD3-204ENST00000585967 GRM8O00222 908 aa21.57■■□□□ 1.04
MBD3-204ENST00000585967 ALDH1L1O75891 902 aa21.57■■□□□ 1.04
MBD3-204ENST00000585967 CHRNDQ07001 517 aa21.57■■□□□ 1.04
MBD3-204ENST00000585967 CCDC57Q2TAC2 916 aa21.57■■□□□ 1.04
MBD3-204ENST00000585967 CDCA5Q96FF9 252 aa21.57■■□□□ 1.04
MBD3-204ENST00000585967 F6X3S4 739 aa21.56■■□□□ 1.04
MBD3-204ENST00000585967 NF2P35240 595 aa21.56■■□□□ 1.04
MBD3-204ENST00000585967 ZNF157P51786 506 aaPredicted RBP21.56■■□□□ 1.04
MBD3-204ENST00000585967 DACT2Q5SW24 774 aa21.56■■□□□ 1.04
MBD3-204ENST00000585967 SRCIN1Q9C0H9 1055 aa21.56■■□□□ 1.04
MBD3-204ENST00000585967 ARAP2Q8WZ64 1704 aa21.55■■□□□ 1.04
MBD3-204ENST00000585967 TTLL5Q6EMB2 1281 aa21.55■■□□□ 1.04
MBD3-204ENST00000585967 SLC4A10Q6U841 1118 aa21.55■■□□□ 1.04
MBD3-204ENST00000585967 ZNF804AQ7Z570 1209 aa21.55■■□□□ 1.04
MBD3-204ENST00000585967 REM2Q8IYK8 340 aaPredicted RBP21.55■■□□□ 1.04
MBD3-204ENST00000585967 SPINK5Q9NQ38 1064 aaPredicted RBP21.53■■□□□ 1.04
MBD3-204ENST00000585967 CNNM1Q9NRU3 951 aa21.53■■□□□ 1.04
MBD3-204ENST00000585967 COL1A1P02452 1464 aaPredicted RBP21.52■■□□□ 1.04
MBD3-204ENST00000585967 FOXO4P98177 505 aa21.52■■□□□ 1.04
MBD3-204ENST00000585967 LMBR1LQ6UX01 489 aa21.52■■□□□ 1.04
MBD3-204ENST00000585967 LDHAL6AQ6ZMR3 332 aa21.52■■□□□ 1.04
MBD3-204ENST00000585967 APOBEC3FQ8IUX4 373 aaKnown RBP21.52■■□□□ 1.04
MBD3-204ENST00000585967 SAGE1Q9NXZ1 904 aa21.52■■□□□ 1.04
MBD3-204ENST00000585967 MYH13Q9UKX3 1938 aa21.52■■□□□ 1.04
MBD3-204ENST00000585967 E9PSI1 815 aa21.51■■□□□ 1.03
MBD3-204ENST00000585967 GTF2IP78347 998 aa21.51■■□□□ 1.03
MBD3-204ENST00000585967 C15orf52Q6ZUT6 534 aaKnown RBP21.51■■□□□ 1.03
MBD3-204ENST00000585967 ASTN2O75129 1339 aaPredicted RBP21.51■■□□□ 1.03
MBD3-204ENST00000585967 PTPRCP08575 1304 aa21.51■■□□□ 1.03
MBD3-204ENST00000585967 TXNRD3Q86VQ6 643 aa21.5■■□□□ 1.03
MBD3-204ENST00000585967 CD209Q9NNX6 404 aa21.5■■□□□ 1.03
MBD3-204ENST00000585967 ZNF521Q96K83 1311 aa21.5■■□□□ 1.03
MBD3-204ENST00000585967 WTIPA6NIX2 430 aaPredicted RBP21.49■■□□□ 1.03
MBD3-204ENST00000585967 WNT10BO00744 389 aa21.49■■□□□ 1.03
MBD3-204ENST00000585967 SLC10A3P09131 477 aa21.49■■□□□ 1.03
MBD3-204ENST00000585967 TTLL12Q14166 644 aaPredicted RBP21.49■■□□□ 1.03
MBD3-204ENST00000585967 DLK2Q6UY11 383 aa21.49■■□□□ 1.03
MBD3-204ENST00000585967 KIAA0825Q8IV33 1275 aa21.49■■□□□ 1.03
MBD3-204ENST00000585967 MYO1BO43795 1136 aa21.48■■□□□ 1.03
MBD3-204ENST00000585967 TAF5LO75529 589 aa21.48■■□□□ 1.03
MBD3-204ENST00000585967 NBPF9Q3BBW0 867 aa21.48■■□□□ 1.03
MBD3-204ENST00000585967 ABHD8Q96I13 439 aa21.48■■□□□ 1.03
MBD3-204ENST00000585967 TSKSQ9UJT2 592 aa21.48■■□□□ 1.03
MBD3-204ENST00000585967 FAM155AB1AL88 458 aaPredicted RBP21.47■■□□□ 1.03
MBD3-204ENST00000585967 KLRK1P26718 216 aa21.47■■□□□ 1.03
MBD3-204ENST00000585967 MXD3Q9BW11 206 aa21.47■■□□□ 1.03
MBD3-204ENST00000585967 SASH1O94885 1247 aa21.46■■□□□ 1.03
MBD3-204ENST00000585967 FKBP1AP62942 108 aaKnown RBP21.46■■□□□ 1.03
MBD3-204ENST00000585967 KIF23Q02241 960 aaPredicted RBP21.46■■□□□ 1.03
MBD3-204ENST00000585967 DLGAP5Q15398 846 aa21.46■■□□□ 1.03
MBD3-204ENST00000585967 HELBQ8NG08 1087 aaPredicted RBP21.46■■□□□ 1.03
MBD3-204ENST00000585967 IL1R1P14778 569 aa21.45■■□□□ 1.02
MBD3-204ENST00000585967 MROH5Q6ZUA9 1318 aa21.45■■□□□ 1.02
MBD3-204ENST00000585967 PLIN1O60240 522 aa21.44■■□□□ 1.02
MBD3-204ENST00000585967 UBE4AQ14139 1066 aa21.44■■□□□ 1.02
MBD3-204ENST00000585967 ARMC9Q7Z3E5 817 aa21.44■■□□□ 1.02
MBD3-204ENST00000585967 RASAL3Q86YV0 1011 aa21.44■■□□□ 1.02
MBD3-204ENST00000585967 PPP2R3BQ9Y5P8 575 aa21.44■■□□□ 1.02
MBD3-204ENST00000585967 EPHA10Q5JZY3 1008 aa21.43■■□□□ 1.02
MBD3-204ENST00000585967 MTMR14Q8NCE2 650 aa21.43■■□□□ 1.02
MBD3-204ENST00000585967 ZNF594Q96JF6 807 aaPredicted RBP21.43■■□□□ 1.02
MBD3-204ENST00000585967 UTYO14607 1347 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms