RNA–Protein interactions for RNA: ENST00000585672.5

MBD1-212, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-212ENST00000585672 ZKSCAN1P17029 563 aaPredicted RBP17.17■□□□□ 0.34
MBD1-212ENST00000585672 FANCCQ00597 558 aa17.17■□□□□ 0.34
MBD1-212ENST00000585672 CASP8Q14790 479 aa17.17■□□□□ 0.34
MBD1-212ENST00000585672 LRCH2Q5VUJ6 765 aa17.17■□□□□ 0.34
MBD1-212ENST00000585672 CREB3L3Q68CJ9 461 aa17.17■□□□□ 0.34
MBD1-212ENST00000585672 TMEM139Q8IV31 216 aa17.17■□□□□ 0.34
MBD1-212ENST00000585672 SGSM3Q96HU1 749 aa17.17■□□□□ 0.34
MBD1-212ENST00000585672 FAM107BQ9H098 131 aa17.17■□□□□ 0.34
MBD1-212ENST00000585672 PPP2R5AQ15172 486 aa17.17■□□□□ 0.34
MBD1-212ENST00000585672 ARHGEF28Q8N1W1 1705 aaKnown RBP17.17■□□□□ 0.34
MBD1-212ENST00000585672 RNF217Q8TC41 542 aa17.17■□□□□ 0.34
MBD1-212ENST00000585672 SOS1Q07889 1333 aaPredicted RBP17.17■□□□□ 0.34
MBD1-212ENST00000585672 ATP1A3P13637 1013 aa17.16■□□□□ 0.34
MBD1-212ENST00000585672 TOB2Q14106 344 aaPredicted RBP17.16■□□□□ 0.34
MBD1-212ENST00000585672 SRGAP1Q7Z6B7 1085 aa17.16■□□□□ 0.34
MBD1-212ENST00000585672 FSIP1Q8NA03 581 aa17.16■□□□□ 0.34
MBD1-212ENST00000585672 PPP1R12AO14974 1030 aaPredicted RBP17.16■□□□□ 0.34
MBD1-212ENST00000585672 LMOD1P29536 600 aaPredicted RBP17.16■□□□□ 0.34
MBD1-212ENST00000585672 MSANTD4Q8NCY6 345 aa17.16■□□□□ 0.34
MBD1-212ENST00000585672 DPF2Q92785 391 aa17.16■□□□□ 0.34
MBD1-212ENST00000585672 RBM8AQ9Y5S9 174 aaKnown RBP17.16■□□□□ 0.34
MBD1-212ENST00000585672 CUTAO60888 179 aa17.15■□□□□ 0.34
MBD1-212ENST00000585672 ERLIN1O75477 346 aa17.15■□□□□ 0.34
MBD1-212ENST00000585672 USP8P40818 1118 aa17.15■□□□□ 0.34
MBD1-212ENST00000585672 PTPN21Q16825 1174 aa17.15■□□□□ 0.34
MBD1-212ENST00000585672 EFCAB2Q5VUJ9 269 aa17.15■□□□□ 0.34
MBD1-212ENST00000585672 JPH2Q9BR39 696 aaPredicted RBP17.15■□□□□ 0.34
MBD1-212ENST00000585672 PUF60Q9UHX1 559 aaKnown RBP17.15■□□□□ 0.34
MBD1-212ENST00000585672 ZCCHC11Q5TAX3 1644 aaKnown RBP17.15■□□□□ 0.34
MBD1-212ENST00000585672 H3BQV1 296 aa17.15■□□□□ 0.34
MBD1-212ENST00000585672 GOLIM4O00461 696 aa17.15■□□□□ 0.34
MBD1-212ENST00000585672 ARHGAP6O43182 974 aa17.15■□□□□ 0.34
MBD1-212ENST00000585672 C21orf2O43822 256 aa17.15■□□□□ 0.34
MBD1-212ENST00000585672 MAP9Q49MG5 647 aa17.15■□□□□ 0.34
MBD1-212ENST00000585672 IFFO2Q5TF58 517 aa17.15■□□□□ 0.34
MBD1-212ENST00000585672 MCM10Q7L590 875 aa17.15■□□□□ 0.34
MBD1-212ENST00000585672 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.15■□□□□ 0.34
MBD1-212ENST00000585672 SDF4Q9BRK5 362 aa17.15■□□□□ 0.34
MBD1-212ENST00000585672 RAI14Q9P0K7 980 aa17.15■□□□□ 0.34
MBD1-212ENST00000585672 ABCC1P33527 1531 aa17.14■□□□□ 0.34
MBD1-212ENST00000585672 LRRIQ3A6PVS8 624 aaPredicted RBP17.14■□□□□ 0.33
MBD1-212ENST00000585672 CPLX2Q6PUV4 134 aaKnown RBP17.14■□□□□ 0.33
MBD1-212ENST00000585672 RHPN1Q8TCX5 695 aa17.14■□□□□ 0.33
MBD1-212ENST00000585672 RUFY2Q8WXA3 655 aa17.14■□□□□ 0.33
MBD1-212ENST00000585672 WDHD1O75717 1129 aaPredicted RBP17.14■□□□□ 0.33
MBD1-212ENST00000585672 ANKRD1Q15327 319 aa17.14■□□□□ 0.33
MBD1-212ENST00000585672 TOGARAM2Q6ZUX3 1019 aa17.14■□□□□ 0.33
MBD1-212ENST00000585672 HDGFL2Q7Z4V5 671 aaPredicted RBP17.14■□□□□ 0.33
MBD1-212ENST00000585672 FMR1NBQ8N0W7 255 aaPredicted RBP17.14■□□□□ 0.33
MBD1-212ENST00000585672 HSD3B7Q9H2F3 369 aa17.14■□□□□ 0.33
MBD1-212ENST00000585672 KIAA1468Q9P260 1216 aa17.14■□□□□ 0.33
MBD1-212ENST00000585672 STK26Q9P289 416 aa17.14■□□□□ 0.33
MBD1-212ENST00000585672 TAF6LQ9Y6J9 622 aa17.14■□□□□ 0.33
MBD1-212ENST00000585672 FAM169AQ9Y6X4 670 aa17.14■□□□□ 0.33
MBD1-212ENST00000585672 ZFYVE16Q7Z3T8 1539 aa17.14■□□□□ 0.33
MBD1-212ENST00000585672 RNF40O75150 1001 aa17.13■□□□□ 0.33
MBD1-212ENST00000585672 VSNL1P62760 191 aa17.13■□□□□ 0.33
MBD1-212ENST00000585672 GRIPAP1Q4V328 841 aa17.13■□□□□ 0.33
MBD1-212ENST00000585672 AFAP1L1Q8TED9 768 aa17.13■□□□□ 0.33
MBD1-212ENST00000585672 CCDC12Q8WUD4 166 aaPredicted RBP17.13■□□□□ 0.33
MBD1-212ENST00000585672 USP28Q96RU2 1077 aa17.13■□□□□ 0.33
MBD1-212ENST00000585672 GOLGA6L9A6NEM1 432 aa17.13■□□□□ 0.33
MBD1-212ENST00000585672 POTEB2H3BUK9 544 aa17.13■□□□□ 0.33
MBD1-212ENST00000585672 BIN1O00499 593 aa17.13■□□□□ 0.33
MBD1-212ENST00000585672 SLC27A2O14975 620 aa17.13■□□□□ 0.33
MBD1-212ENST00000585672 SURF6O75683 361 aaKnown RBP17.13■□□□□ 0.33
MBD1-212ENST00000585672 PSMA5P28066 241 aa17.13■□□□□ 0.33
MBD1-212ENST00000585672 NUTM2DQ5VT03 806 aaPredicted RBP17.13■□□□□ 0.33
MBD1-212ENST00000585672 GBP6Q6ZN66 633 aa17.13■□□□□ 0.33
MBD1-212ENST00000585672 OSCARQ8IYS5 282 aa17.13■□□□□ 0.33
MBD1-212ENST00000585672 GNL3LQ9NVN8 582 aaKnown RBP17.13■□□□□ 0.33
MBD1-212ENST00000585672 CHD2O14647 1828 aaKnown RBP17.12■□□□□ 0.33
MBD1-212ENST00000585672 PPLO60437 1756 aa17.12■□□□□ 0.33
MBD1-212ENST00000585672 RPS6KB1P23443 525 aa17.12■□□□□ 0.33
MBD1-212ENST00000585672 BLOC1S2Q6QNY1 142 aa17.12■□□□□ 0.33
MBD1-212ENST00000585672 SSH3Q8TE77 659 aa17.12■□□□□ 0.33
MBD1-212ENST00000585672 IRX2Q9BZI1 471 aaPredicted RBP17.12■□□□□ 0.33
MBD1-212ENST00000585672 A1CFQ9NQ94 594 aaKnown RBP17.12■□□□□ 0.33
MBD1-212ENST00000585672 SYF2O95926 243 aaKnown RBP17.12■□□□□ 0.33
MBD1-212ENST00000585672 CCT5P48643 541 aa17.12■□□□□ 0.33
MBD1-212ENST00000585672 SCRN1Q12765 414 aa17.12■□□□□ 0.33
MBD1-212ENST00000585672 STAG1Q8WVM7 1258 aa17.12■□□□□ 0.33
MBD1-212ENST00000585672 MIEF2Q96C03 454 aa17.12■□□□□ 0.33
MBD1-212ENST00000585672 DNAJC5Q9H3Z4 198 aa17.12■□□□□ 0.33
MBD1-212ENST00000585672 MIS18AQ9NYP9 233 aa17.12■□□□□ 0.33
MBD1-212ENST00000585672 TMEM232C9JQI7 657 aa17.11■□□□□ 0.33
MBD1-212ENST00000585672 PRPF6O94906 941 aaKnown RBP17.11■□□□□ 0.33
MBD1-212ENST00000585672 ME1P48163 572 aa17.11■□□□□ 0.33
MBD1-212ENST00000585672 UBASH3AP57075 661 aa17.11■□□□□ 0.33
MBD1-212ENST00000585672 KARSQ15046 597 aaKnown RBP17.11■□□□□ 0.33
MBD1-212ENST00000585672 VSTM4Q8IW00 320 aa17.11■□□□□ 0.33
MBD1-212ENST00000585672 NEDD4P46934 1319 aa17.11■□□□□ 0.33
MBD1-212ENST00000585672 RHOXF2BP0C7M4 288 aa17.11■□□□□ 0.33
MBD1-212ENST00000585672 GPTP24298 496 aa17.11■□□□□ 0.33
MBD1-212ENST00000585672 GIMAP7Q8NHV1 300 aa17.11■□□□□ 0.33
MBD1-212ENST00000585672 MAP4K1Q92918 833 aa17.11■□□□□ 0.33
MBD1-212ENST00000585672 FAXDC2Q96IV6 333 aa17.11■□□□□ 0.33
MBD1-212ENST00000585672 RHOXF2Q9BQY4 288 aa17.11■□□□□ 0.33
MBD1-212ENST00000585672 ALDH8A1Q9H2A2 487 aaPredicted RBP17.11■□□□□ 0.33
MBD1-212ENST00000585672 A0A1B0GVL5 298 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms