RNA–Protein interactions for RNA: ENST00000585335.1

SCAMP4-209, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-209ENST00000585335 ERICH6BQ5W0A0 696 aa17.97■□□□□ 0.47
SCAMP4-209ENST00000585335 VPS37DQ86XT2 251 aa17.97■□□□□ 0.47
SCAMP4-209ENST00000585335 GCC1Q96CN9 775 aa17.97■□□□□ 0.47
SCAMP4-209ENST00000585335 GPR101Q96P66 508 aaPredicted RBP17.97■□□□□ 0.47
SCAMP4-209ENST00000585335 GPR108Q9NPR9 543 aa17.97■□□□□ 0.47
SCAMP4-209ENST00000585335 FGFR2P21802 821 aa17.96■□□□□ 0.47
SCAMP4-209ENST00000585335 CLASRPQ8N2M8 674 aaKnown RBP17.96■□□□□ 0.47
SCAMP4-209ENST00000585335 RHPN1Q8TCX5 695 aa17.96■□□□□ 0.47
SCAMP4-209ENST00000585335 NEUROD6Q96NK8 337 aa17.96■□□□□ 0.47
SCAMP4-209ENST00000585335 LRRCC1Q9C099 1032 aa17.96■□□□□ 0.47
SCAMP4-209ENST00000585335 COA1Q9GZY4 146 aa17.96■□□□□ 0.47
SCAMP4-209ENST00000585335 SBF1O95248 1867 aa17.95■□□□□ 0.46
SCAMP4-209ENST00000585335 A0A1B0GUL7 405 aa17.95■□□□□ 0.46
SCAMP4-209ENST00000585335 SNAP23O00161 211 aa17.95■□□□□ 0.46
SCAMP4-209ENST00000585335 GORABQ5T7V8 394 aa17.95■□□□□ 0.46
SCAMP4-209ENST00000585335 ZNF609O15014 1411 aa17.95■□□□□ 0.46
SCAMP4-209ENST00000585335 GOLGB1Q14789 3259 aaKnown RBP17.95■□□□□ 0.46
SCAMP4-209ENST00000585335 ECE2O60344 883 aa17.94■□□□□ 0.46
SCAMP4-209ENST00000585335 HIBADHP31937 336 aaKnown RBP17.94■□□□□ 0.46
SCAMP4-209ENST00000585335 EIF6P56537 245 aaKnown RBP17.94■□□□□ 0.46
SCAMP4-209ENST00000585335 DOK7Q18PE1 504 aa17.94■□□□□ 0.46
SCAMP4-209ENST00000585335 TNNI3KQ59H18 835 aa17.94■□□□□ 0.46
SCAMP4-209ENST00000585335 GNL3LQ9NVN8 582 aaKnown RBP17.94■□□□□ 0.46
SCAMP4-209ENST00000585335 ZNRF3Q9ULT6 936 aa17.94■□□□□ 0.46
SCAMP4-209ENST00000585335 FPGT-TNNI3KV9GXZ4 949 aa17.94■□□□□ 0.46
SCAMP4-209ENST00000585335 CCDC88AQ3V6T2 1871 aa17.94■□□□□ 0.46
SCAMP4-209ENST00000585335 DICER1Q9UPY3 1922 aaKnown RBP17.94■□□□□ 0.46
SCAMP4-209ENST00000585335 WTIPA6NIX2 430 aaPredicted RBP17.93■□□□□ 0.46
SCAMP4-209ENST00000585335 KLRK1P26718 216 aa17.93■□□□□ 0.46
SCAMP4-209ENST00000585335 PRELPP51888 382 aa17.93■□□□□ 0.46
SCAMP4-209ENST00000585335 PODNQ7Z5L7 613 aa17.93■□□□□ 0.46
SCAMP4-209ENST00000585335 DBNDD1Q9H9R9 158 aa17.93■□□□□ 0.46
SCAMP4-209ENST00000585335 CHD4Q14839 1912 aa17.93■□□□□ 0.46
SCAMP4-209ENST00000585335 TIAM2Q8IVF5 1701 aa17.92■□□□□ 0.46
SCAMP4-209ENST00000585335 FRAT2O75474 233 aaPredicted RBP17.92■□□□□ 0.46
SCAMP4-209ENST00000585335 IFIT2P09913 472 aaKnown RBP17.92■□□□□ 0.46
SCAMP4-209ENST00000585335 GYG1P46976 350 aa17.92■□□□□ 0.46
SCAMP4-209ENST00000585335 TIMM10P62072 90 aa17.92■□□□□ 0.46
SCAMP4-209ENST00000585335 AACSQ86V21 672 aa17.92■□□□□ 0.46
SCAMP4-209ENST00000585335 TXNRD3Q86VQ6 643 aa17.92■□□□□ 0.46
SCAMP4-209ENST00000585335 IL1RAPL2Q9NP60 686 aa17.92■□□□□ 0.46
SCAMP4-209ENST00000585335 TNIP1Q15025 636 aa17.91■□□□□ 0.46
SCAMP4-209ENST00000585335 DPY19L2Q6NUT2 758 aa17.91■□□□□ 0.46
SCAMP4-209ENST00000585335 XAGE2Q96GT9 111 aa17.91■□□□□ 0.46
SCAMP4-209ENST00000585335 FAM84BQ96KN1 310 aaPredicted RBP17.91■□□□□ 0.46
SCAMP4-209ENST00000585335 BCL11AQ9H165 835 aa17.91■□□□□ 0.46
SCAMP4-209ENST00000585335 CD209Q9NNX6 404 aa17.91■□□□□ 0.46
SCAMP4-209ENST00000585335 ARAP2Q8WZ64 1704 aa17.91■□□□□ 0.46
SCAMP4-209ENST00000585335 IRS2Q9Y4H2 1338 aa17.91■□□□□ 0.46
SCAMP4-209ENST00000585335 FZD9O00144 591 aa17.9■□□□□ 0.46
SCAMP4-209ENST00000585335 IGHDP01880 384 aa17.9■□□□□ 0.46
SCAMP4-209ENST00000585335 CCDC158Q5M9N0 1113 aa17.9■□□□□ 0.46
SCAMP4-209ENST00000585335 FBXO33Q7Z6M2 555 aa17.9■□□□□ 0.46
SCAMP4-209ENST00000585335 SMC5Q8IY18 1101 aa17.9■□□□□ 0.46
SCAMP4-209ENST00000585335 CCDC136Q96JN2 1154 aa17.9■□□□□ 0.46
SCAMP4-209ENST00000585335 IL1R1P14778 569 aa17.89■□□□□ 0.45
SCAMP4-209ENST00000585335 ADORA1P30542 326 aa17.89■□□□□ 0.45
SCAMP4-209ENST00000585335 BCAMP50895 628 aa17.89■□□□□ 0.45
SCAMP4-209ENST00000585335 ANKRD45Q5TZF3 282 aa17.89■□□□□ 0.45
SCAMP4-209ENST00000585335 CIAPIN1Q6FI81 312 aa17.89■□□□□ 0.45
SCAMP4-209ENST00000585335 FBXW7Q969H0 707 aa17.89■□□□□ 0.45
SCAMP4-209ENST00000585335 GPATCH3Q96I76 525 aa17.89■□□□□ 0.45
SCAMP4-209ENST00000585335 COL4A5P29400 1685 aa17.89■□□□□ 0.45
SCAMP4-209ENST00000585335 USP17L3A6NCW0 530 aa17.88■□□□□ 0.45
SCAMP4-209ENST00000585335 USP17L4A6NCW7 530 aa17.88■□□□□ 0.45
SCAMP4-209ENST00000585335 SEMA3EO15041 775 aa17.88■□□□□ 0.45
SCAMP4-209ENST00000585335 UQCRFS1P1P0C7P4 283 aa17.88■□□□□ 0.45
SCAMP4-209ENST00000585335 TTC39AQ5SRH9 613 aa17.88■□□□□ 0.45
SCAMP4-209ENST00000585335 CCDC102BQ68D86 513 aa17.88■□□□□ 0.45
SCAMP4-209ENST00000585335 USP17L1Q7RTZ2 530 aa17.88■□□□□ 0.45
SCAMP4-209ENST00000585335 EAF2Q96CJ1 260 aaPredicted RBP17.88■□□□□ 0.45
SCAMP4-209ENST00000585335 DBNDD2Q9BQY9 259 aa17.88■□□□□ 0.45
SCAMP4-209ENST00000585335 CCDC8Q9H0W5 538 aaPredicted RBP17.88■□□□□ 0.45
SCAMP4-209ENST00000585335 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.88■□□□□ 0.45
SCAMP4-209ENST00000585335 YDJCA8MPS7 323 aa17.87■□□□□ 0.45
SCAMP4-209ENST00000585335 SMARCA5O60264 1052 aaPredicted RBP17.87■□□□□ 0.45
SCAMP4-209ENST00000585335 RAD17O75943 681 aa17.87■□□□□ 0.45
SCAMP4-209ENST00000585335 TDRD7Q8NHU6 1098 aaKnown RBP17.87■□□□□ 0.45
SCAMP4-209ENST00000585335 DBNLQ9UJU6 430 aaKnown RBP17.87■□□□□ 0.45
SCAMP4-209ENST00000585335 PHKA1P46020 1223 aa17.86■□□□□ 0.45
SCAMP4-209ENST00000585335 CXCL9Q07325 125 aa17.86■□□□□ 0.45
SCAMP4-209ENST00000585335 STRIP1Q5VSL9 837 aa17.86■□□□□ 0.45
SCAMP4-209ENST00000585335 TTLL5Q6EMB2 1281 aa17.86■□□□□ 0.45
SCAMP4-209ENST00000585335 CENPQQ7L2Z9 268 aaPredicted RBP17.86■□□□□ 0.45
SCAMP4-209ENST00000585335 GPC2Q8N158 579 aa17.86■□□□□ 0.45
SCAMP4-209ENST00000585335 PPP4R2Q9NY27 417 aa17.86■□□□□ 0.45
SCAMP4-209ENST00000585335 DENND2AQ9ULE3 1009 aa17.86■□□□□ 0.45
SCAMP4-209ENST00000585335 GJA3Q9Y6H8 435 aa17.86■□□□□ 0.45
SCAMP4-209ENST00000585335 KDM2BQ8NHM5 1336 aa17.86■□□□□ 0.45
SCAMP4-209ENST00000585335 ZNF541Q9H0D2 1346 aa17.86■□□□□ 0.45
SCAMP4-209ENST00000585335 GTF2IP78347 998 aa17.85■□□□□ 0.45
SCAMP4-209ENST00000585335 B4GALNT3Q6L9W6 998 aa17.85■□□□□ 0.45
SCAMP4-209ENST00000585335 MYO3BQ8WXR4 1341 aa17.85■□□□□ 0.45
SCAMP4-209ENST00000585335 TLR7Q9NYK1 1049 aaKnown RBP17.85■□□□□ 0.45
SCAMP4-209ENST00000585335 IQSEC3Q9UPP2 1182 aaPredicted RBP17.85■□□□□ 0.45
SCAMP4-209ENST00000585335 GLTPD2A6NH11 291 aa17.84■□□□□ 0.45
SCAMP4-209ENST00000585335 PSMD14O00487 310 aa17.84■□□□□ 0.45
SCAMP4-209ENST00000585335 ZBTB22O15209 634 aa17.84■□□□□ 0.45
SCAMP4-209ENST00000585335 ARID4AP29374 1257 aaPredicted RBP17.84■□□□□ 0.45
SCAMP4-209ENST00000585335 NUCB1Q02818 461 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms