RNA–Protein interactions for RNA: ENST00000585134.1

MKS1-213, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-213ENST00000585134 PDE8BO95263 885 aa17.54■□□□□ 0.4
MKS1-213ENST00000585134 CXCL9Q07325 125 aa17.54■□□□□ 0.4
MKS1-213ENST00000585134 UBE4AQ14139 1066 aa17.54■□□□□ 0.4
MKS1-213ENST00000585134 PUM3Q15397 648 aaKnown RBP17.54■□□□□ 0.4
MKS1-213ENST00000585134 FBXO3Q9UK99 471 aa17.54■□□□□ 0.4
MKS1-213ENST00000585134 SCN9AQ15858 1988 aa17.53■□□□□ 0.4
MKS1-213ENST00000585134 IRS2Q9Y4H2 1338 aa17.53■□□□□ 0.4
MKS1-213ENST00000585134 WDR90Q96KV7 1748 aa17.53■□□□□ 0.4
MKS1-213ENST00000585134 SURF6O75683 361 aaKnown RBP17.53■□□□□ 0.4
MKS1-213ENST00000585134 SLC5A1P13866 664 aa17.53■□□□□ 0.4
MKS1-213ENST00000585134 GYG1P46976 350 aa17.53■□□□□ 0.4
MKS1-213ENST00000585134 IRX6P78412 446 aaPredicted RBP17.53■□□□□ 0.4
MKS1-213ENST00000585134 TFCP2Q12800 502 aa17.53■□□□□ 0.4
MKS1-213ENST00000585134 ATP2B3Q16720 1220 aa17.53■□□□□ 0.4
MKS1-213ENST00000585134 ZNF804AQ7Z570 1209 aa17.53■□□□□ 0.4
MKS1-213ENST00000585134 COA1Q9GZY4 146 aa17.53■□□□□ 0.4
MKS1-213ENST00000585134 RRAGCQ9HB90 399 aa17.53■□□□□ 0.4
MKS1-213ENST00000585134 KCNQ5Q9NR82 932 aa17.53■□□□□ 0.4
MKS1-213ENST00000585134 PSMD14O00487 310 aa17.52■□□□□ 0.4
MKS1-213ENST00000585134 HMMRO75330 724 aa17.52■□□□□ 0.4
MKS1-213ENST00000585134 TNIP1Q15025 636 aa17.52■□□□□ 0.4
MKS1-213ENST00000585134 GPC2Q8N158 579 aa17.52■□□□□ 0.4
MKS1-213ENST00000585134 EXOC6BQ9Y2D4 811 aa17.52■□□□□ 0.4
MKS1-213ENST00000585134 ZNF609O15014 1411 aa17.51■□□□□ 0.39
MKS1-213ENST00000585134 IFIT1P09914 478 aaKnown RBP17.51■□□□□ 0.39
MKS1-213ENST00000585134 C15orf52Q6ZUT6 534 aaKnown RBP17.51■□□□□ 0.39
MKS1-213ENST00000585134 RPAP2Q8IXW5 612 aaPredicted RBP17.51■□□□□ 0.39
MKS1-213ENST00000585134 CD209Q9NNX6 404 aa17.51■□□□□ 0.39
MKS1-213ENST00000585134 ARAP2Q8WZ64 1704 aa17.5■□□□□ 0.39
MKS1-213ENST00000585134 APBB1O00213 710 aa17.5■□□□□ 0.39
MKS1-213ENST00000585134 FGFR2P21802 821 aa17.5■□□□□ 0.39
MKS1-213ENST00000585134 GMPSP49915 693 aaPredicted RBP17.5■□□□□ 0.39
MKS1-213ENST00000585134 VPS37DQ86XT2 251 aa17.5■□□□□ 0.39
MKS1-213ENST00000585134 SIRT2Q8IXJ6 389 aa17.5■□□□□ 0.39
MKS1-213ENST00000585134 LPIN2Q92539 896 aa17.5■□□□□ 0.39
MKS1-213ENST00000585134 IQSEC3Q9UPP2 1182 aaPredicted RBP17.5■□□□□ 0.39
MKS1-213ENST00000585134 JAG2Q9Y219 1238 aa17.5■□□□□ 0.39
MKS1-213ENST00000585134 ZBTB12Q9Y330 459 aaPredicted RBP17.5■□□□□ 0.39
MKS1-213ENST00000585134 PSME4Q14997 1843 aa17.49■□□□□ 0.39
MKS1-213ENST00000585134 LMOD1P29536 600 aaPredicted RBP17.49■□□□□ 0.39
MKS1-213ENST00000585134 HIBADHP31937 336 aaKnown RBP17.49■□□□□ 0.39
MKS1-213ENST00000585134 CAVIN4Q5BKX8 364 aa17.49■□□□□ 0.39
MKS1-213ENST00000585134 PODNQ7Z5L7 613 aa17.49■□□□□ 0.39
MKS1-213ENST00000585134 EXOC6Q8TAG9 804 aa17.49■□□□□ 0.39
MKS1-213ENST00000585134 BCL11AQ9H165 835 aa17.49■□□□□ 0.39
MKS1-213ENST00000585134 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.49■□□□□ 0.39
MKS1-213ENST00000585134 USP17L3A6NCW0 530 aa17.48■□□□□ 0.39
MKS1-213ENST00000585134 USP17L4A6NCW7 530 aa17.48■□□□□ 0.39
MKS1-213ENST00000585134 SASH1O94885 1247 aa17.48■□□□□ 0.39
MKS1-213ENST00000585134 ADORA1P30542 326 aa17.48■□□□□ 0.39
MKS1-213ENST00000585134 GTF2IP78347 998 aa17.48■□□□□ 0.39
MKS1-213ENST00000585134 USP17L1Q7RTZ2 530 aa17.48■□□□□ 0.39
MKS1-213ENST00000585134 C16orf71Q8IYS4 520 aaPredicted RBP17.48■□□□□ 0.39
MKS1-213ENST00000585134 L3MBTL3Q96JM7 780 aaPredicted RBP17.48■□□□□ 0.39
MKS1-213ENST00000585134 FAM84BQ96KN1 310 aaPredicted RBP17.48■□□□□ 0.39
MKS1-213ENST00000585134 MXD3Q9BW11 206 aa17.48■□□□□ 0.39
MKS1-213ENST00000585134 NOP58Q9Y2X3 529 aaKnown RBP17.48■□□□□ 0.39
MKS1-213ENST00000585134 ZNF646O15015 1829 aaPredicted RBP17.47■□□□□ 0.39
MKS1-213ENST00000585134 A0A1B0GUL7 405 aa17.47■□□□□ 0.39
MKS1-213ENST00000585134 KIF3CO14782 793 aa17.47■□□□□ 0.39
MKS1-213ENST00000585134 FRAT2O75474 233 aaPredicted RBP17.47■□□□□ 0.39
MKS1-213ENST00000585134 BCAMP50895 628 aa17.47■□□□□ 0.39
MKS1-213ENST00000585134 SCNN1DP51172 638 aa17.47■□□□□ 0.39
MKS1-213ENST00000585134 CHAF1AQ13111 956 aaPredicted RBP17.47■□□□□ 0.39
MKS1-213ENST00000585134 NEUROD6Q96NK8 337 aa17.47■□□□□ 0.39
MKS1-213ENST00000585134 HACL1Q9UJ83 578 aa17.47■□□□□ 0.39
MKS1-213ENST00000585134 AKAP2Q9Y2D5 859 aa17.47■□□□□ 0.39
MKS1-213ENST00000585134 PCDHB15Q9Y5E8 787 aa17.47■□□□□ 0.39
MKS1-213ENST00000585134 SHTN1A0MZ66 631 aa17.46■□□□□ 0.39
MKS1-213ENST00000585134 IQCA1LA6NCM1 817 aa17.46■□□□□ 0.39
MKS1-213ENST00000585134 POTECB2RU33 542 aa17.46■□□□□ 0.39
MKS1-213ENST00000585134 VEGFAP15692 232 aaPredicted RBP17.46■□□□□ 0.39
MKS1-213ENST00000585134 TIMM10P62072 90 aa17.46■□□□□ 0.39
MKS1-213ENST00000585134 EAPPQ56P03 285 aaPredicted RBP17.46■□□□□ 0.39
MKS1-213ENST00000585134 RSBN1LQ6PCB5 846 aaPredicted RBP17.46■□□□□ 0.39
MKS1-213ENST00000585134 SCN4AP35499 1836 aa17.46■□□□□ 0.39
MKS1-213ENST00000585134 VIL1P09327 827 aaKnown RBP17.45■□□□□ 0.38
MKS1-213ENST00000585134 IL1R1P14778 569 aa17.45■□□□□ 0.38
MKS1-213ENST00000585134 EPHX2P34913 555 aa17.45■□□□□ 0.38
MKS1-213ENST00000585134 EPS15P42566 896 aa17.45■□□□□ 0.38
MKS1-213ENST00000585134 HSP90AB4PQ58FF6 505 aa17.45■□□□□ 0.38
MKS1-213ENST00000585134 TNNI3KQ59H18 835 aa17.45■□□□□ 0.38
MKS1-213ENST00000585134 TTLL5Q6EMB2 1281 aa17.45■□□□□ 0.38
MKS1-213ENST00000585134 FBXO33Q7Z6M2 555 aa17.45■□□□□ 0.38
MKS1-213ENST00000585134 ERC1Q8IUD2 1116 aa17.45■□□□□ 0.38
MKS1-213ENST00000585134 TAF1DQ9H5J8 278 aaPredicted RBP17.45■□□□□ 0.38
MKS1-213ENST00000585134 FPGT-TNNI3KV9GXZ4 949 aa17.45■□□□□ 0.38
MKS1-213ENST00000585134 MYH13Q9UKX3 1938 aa17.45■□□□□ 0.38
MKS1-213ENST00000585134 PHKA1P46020 1223 aa17.44■□□□□ 0.38
MKS1-213ENST00000585134 DACT2Q5SW24 774 aa17.44■□□□□ 0.38
MKS1-213ENST00000585134 GORABQ5T7V8 394 aa17.44■□□□□ 0.38
MKS1-213ENST00000585134 STRIP1Q5VSL9 837 aa17.44■□□□□ 0.38
MKS1-213ENST00000585134 MICALL2Q8IY33 904 aa17.44■□□□□ 0.38
MKS1-213ENST00000585134 TDRD7Q8NHU6 1098 aaKnown RBP17.44■□□□□ 0.38
MKS1-213ENST00000585134 XAGE2Q96GT9 111 aa17.44■□□□□ 0.38
MKS1-213ENST00000585134 IL1RAPL2Q9NP60 686 aa17.44■□□□□ 0.38
MKS1-213ENST00000585134 GPRC5DQ9NZD1 345 aa17.44■□□□□ 0.38
MKS1-213ENST00000585134 COL1A1P02452 1464 aaPredicted RBP17.44■□□□□ 0.38
MKS1-213ENST00000585134 RPS12P25398 132 aaKnown RBP17.43■□□□□ 0.38
MKS1-213ENST00000585134 RHPN1Q8TCX5 695 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms