RNA–Protein interactions for RNA: ENST00000585031.2

TOP3A-220, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-220ENST00000585031 SZT2Q5T011 3432 aa23.55■■□□□ 1.36
TOP3A-220ENST00000585031 SASH1O94885 1247 aa23.54■■□□□ 1.36
TOP3A-220ENST00000585031 LDLRAD1Q5T700 205 aa23.54■■□□□ 1.36
TOP3A-220ENST00000585031 DUSP27Q5VZP5 1158 aa23.54■■□□□ 1.36
TOP3A-220ENST00000585031 OTOP1Q7RTM1 612 aa23.54■■□□□ 1.36
TOP3A-220ENST00000585031 MYD88Q99836 296 aa23.54■■□□□ 1.36
TOP3A-220ENST00000585031 RBBP6Q7Z6E9 1792 aaKnown RBP23.53■■□□□ 1.36
TOP3A-220ENST00000585031 ALDH1A1P00352 501 aa23.53■■□□□ 1.36
TOP3A-220ENST00000585031 HOXB7P09629 217 aa23.53■■□□□ 1.36
TOP3A-220ENST00000585031 ATP2B4P23634 1241 aa23.53■■□□□ 1.36
TOP3A-220ENST00000585031 CCDC152Q4G0S7 254 aa23.53■■□□□ 1.36
TOP3A-220ENST00000585031 SPRYD7Q5W111 196 aa23.53■■□□□ 1.36
TOP3A-220ENST00000585031 RIC3Q7Z5B4 369 aa23.53■■□□□ 1.36
TOP3A-220ENST00000585031 TXNRD3Q86VQ6 643 aa23.53■■□□□ 1.36
TOP3A-220ENST00000585031 TRIM17Q9Y577 477 aa23.53■■□□□ 1.36
TOP3A-220ENST00000585031 PDE8AO60658 829 aa23.52■■□□□ 1.36
TOP3A-220ENST00000585031 PCCAP05165 728 aaPredicted RBP23.52■■□□□ 1.36
TOP3A-220ENST00000585031 CAP1Q01518 475 aa23.52■■□□□ 1.36
TOP3A-220ENST00000585031 LAMB1P07942 1786 aa23.52■■□□□ 1.36
TOP3A-220ENST00000585031 ANKRD18AQ8IVF6 992 aa23.51■■□□□ 1.35
TOP3A-220ENST00000585031 NF2P35240 595 aa23.5■■□□□ 1.35
TOP3A-220ENST00000585031 INHBEP58166 350 aa23.5■■□□□ 1.35
TOP3A-220ENST00000585031 ZBED3Q96IU2 234 aaPredicted RBP23.5■■□□□ 1.35
TOP3A-220ENST00000585031 MINPP1Q9UNW1 487 aa23.5■■□□□ 1.35
TOP3A-220ENST00000585031 MED23Q9ULK4 1368 aa23.5■■□□□ 1.35
TOP3A-220ENST00000585031 MYH3P11055 1940 aa23.49■■□□□ 1.35
TOP3A-220ENST00000585031 EN2P19622 333 aaPredicted RBP23.49■■□□□ 1.35
TOP3A-220ENST00000585031 ARMC9Q7Z3E5 817 aa23.49■■□□□ 1.35
TOP3A-220ENST00000585031 CCDC191Q8NCU4 936 aa23.49■■□□□ 1.35
TOP3A-220ENST00000585031 ARMC5Q96C12 935 aa23.49■■□□□ 1.35
TOP3A-220ENST00000585031 PTPN22Q9Y2R2 807 aa23.49■■□□□ 1.35
TOP3A-220ENST00000585031 CEP290O15078 2479 aa23.48■■□□□ 1.35
TOP3A-220ENST00000585031 IGF2BP3O00425 579 aaKnown RBP eCLIP23.48■■□□□ 1.35
TOP3A-220ENST00000585031 IFNL1Q8IU54 200 aa23.48■■□□□ 1.35
TOP3A-220ENST00000585031 FBXW7Q969H0 707 aa23.48■■□□□ 1.35
TOP3A-220ENST00000585031 CLMNQ96JQ2 1002 aa23.48■■□□□ 1.35
TOP3A-220ENST00000585031 MBIPQ9NS73 344 aa23.48■■□□□ 1.35
TOP3A-220ENST00000585031 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.48■■□□□ 1.35
TOP3A-220ENST00000585031 ANGEL1Q9UNK9 670 aaKnown RBP23.48■■□□□ 1.35
TOP3A-220ENST00000585031 COLQQ9Y215 455 aaPredicted RBP23.48■■□□□ 1.35
TOP3A-220ENST00000585031 SSC5DA1L4H1 1573 aa23.48■■□□□ 1.35
TOP3A-220ENST00000585031 KLRK1P26718 216 aa23.47■■□□□ 1.35
TOP3A-220ENST00000585031 STRIP1Q5VSL9 837 aa23.47■■□□□ 1.35
TOP3A-220ENST00000585031 MANSC4A6NHS7 340 aaPredicted RBP23.46■■□□□ 1.35
TOP3A-220ENST00000585031 CCT4P50991 539 aaKnown RBP23.46■■□□□ 1.35
TOP3A-220ENST00000585031 GOLGA2Q08379 1002 aa23.46■■□□□ 1.35
TOP3A-220ENST00000585031 OGFOD1Q8N543 542 aa23.46■■□□□ 1.35
TOP3A-220ENST00000585031 CWC25Q9NXE8 425 aaPredicted RBP23.46■■□□□ 1.35
TOP3A-220ENST00000585031 PCDHAC2Q9Y5I4 1007 aa23.46■■□□□ 1.35
TOP3A-220ENST00000585031 TTLL11Q8NHH1 800 aa23.45■■□□□ 1.34
TOP3A-220ENST00000585031 GREM2Q9H772 168 aa23.45■■□□□ 1.34
TOP3A-220ENST00000585031 BSDC1Q9NW68 430 aaPredicted RBP23.45■■□□□ 1.34
TOP3A-220ENST00000585031 ELL2O00472 640 aaPredicted RBP23.44■■□□□ 1.34
TOP3A-220ENST00000585031 MMP14P50281 582 aa23.44■■□□□ 1.34
TOP3A-220ENST00000585031 KIAA0825Q8IV33 1275 aa23.44■■□□□ 1.34
TOP3A-220ENST00000585031 CD99L2Q8TCZ2 262 aa23.44■■□□□ 1.34
TOP3A-220ENST00000585031 METTL22Q9BUU2 404 aaPredicted RBP23.44■■□□□ 1.34
TOP3A-220ENST00000585031 ZNF853P0CG23 659 aa23.43■■□□□ 1.34
TOP3A-220ENST00000585031 HSP90B1P14625 803 aaKnown RBP23.43■■□□□ 1.34
TOP3A-220ENST00000585031 GJA5P36382 358 aa23.43■■□□□ 1.34
TOP3A-220ENST00000585031 CTSWP56202 376 aa23.43■■□□□ 1.34
TOP3A-220ENST00000585031 SLC10A4Q96EP9 437 aa23.43■■□□□ 1.34
TOP3A-220ENST00000585031 WNK4Q96J92 1243 aa23.43■■□□□ 1.34
TOP3A-220ENST00000585031 COA1Q9GZY4 146 aa23.43■■□□□ 1.34
TOP3A-220ENST00000585031 ECM29Q5VYK3 1845 aa23.43■■□□□ 1.34
TOP3A-220ENST00000585031 MYO3BQ8WXR4 1341 aa23.42■■□□□ 1.34
TOP3A-220ENST00000585031 IGKV5-2P06315 115 aa23.42■■□□□ 1.34
TOP3A-220ENST00000585031 MAP3K11Q16584 847 aa23.42■■□□□ 1.34
TOP3A-220ENST00000585031 TTLL5Q6EMB2 1281 aa23.42■■□□□ 1.34
TOP3A-220ENST00000585031 APOBEC3FQ8IUX4 373 aaKnown RBP23.42■■□□□ 1.34
TOP3A-220ENST00000585031 RUNDC1Q96C34 613 aa23.42■■□□□ 1.34
TOP3A-220ENST00000585031 ERO1AQ96HE7 468 aa23.42■■□□□ 1.34
TOP3A-220ENST00000585031 TRIOBPQ9H2D6 2365 aa23.42■■□□□ 1.34
TOP3A-220ENST00000585031 AOX1Q06278 1338 aa23.41■■□□□ 1.34
TOP3A-220ENST00000585031 A0A0C4DFX4 3053 aa23.41■■□□□ 1.34
TOP3A-220ENST00000585031 ZBTB48P10074 688 aaPredicted RBP23.41■■□□□ 1.34
TOP3A-220ENST00000585031 CDC5LQ99459 802 aaKnown RBP23.41■■□□□ 1.34
TOP3A-220ENST00000585031 DEFB129Q9H1M3 183 aa23.41■■□□□ 1.34
TOP3A-220ENST00000585031 CRHR2Q13324 411 aa23.4■■□□□ 1.34
TOP3A-220ENST00000585031 CERS5Q8N5B7 392 aa23.4■■□□□ 1.34
TOP3A-220ENST00000585031 OTUD5Q96G74 571 aa23.4■■□□□ 1.34
TOP3A-220ENST00000585031 PTPN18Q99952 460 aa23.4■■□□□ 1.34
TOP3A-220ENST00000585031 RANBP2P49792 3224 aaKnown RBP23.4■■□□□ 1.34
TOP3A-220ENST00000585031 GTF2IP78347 998 aa23.39■■□□□ 1.33
TOP3A-220ENST00000585031 C8orf58Q8NAV2 365 aa23.39■■□□□ 1.33
TOP3A-220ENST00000585031 EFCC1Q9HA90 598 aa23.39■■□□□ 1.33
TOP3A-220ENST00000585031 ZNF333Q96JL9 665 aa23.38■■□□□ 1.33
TOP3A-220ENST00000585031 TMEM106CQ9BVX2 250 aa23.38■■□□□ 1.33
TOP3A-220ENST00000585031 MAP3K2Q9Y2U5 619 aa23.38■■□□□ 1.33
TOP3A-220ENST00000585031 OTOFQ9HC10 1997 aa23.38■■□□□ 1.33
TOP3A-220ENST00000585031 UNCXA6NJT0 531 aa23.37■■□□□ 1.33
TOP3A-220ENST00000585031 SNAP23O00161 211 aa23.37■■□□□ 1.33
TOP3A-220ENST00000585031 ADAMTS8Q9UP79 889 aa23.37■■□□□ 1.33
TOP3A-220ENST00000585031 SP3Q02447 781 aa23.36■■□□□ 1.33
TOP3A-220ENST00000585031 NBPF12Q5TAG4 269 aaPredicted RBP23.36■■□□□ 1.33
TOP3A-220ENST00000585031 LEMD3Q9Y2U8 911 aa23.36■■□□□ 1.33
TOP3A-220ENST00000585031 COL1A1P02452 1464 aaPredicted RBP23.36■■□□□ 1.33
TOP3A-220ENST00000585031 ZNF804BA4D1E1 1349 aa23.35■■□□□ 1.33
TOP3A-220ENST00000585031 IRS2Q9Y4H2 1338 aa23.35■■□□□ 1.33
TOP3A-220ENST00000585031 RALBP1Q15311 655 aa23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms