RNA–Protein interactions for RNA: ENST00000584811.5

TVP23C-210, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 1 (best) BASIC

Gene TVP23C, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-210ENST00000584811 RIC1Q4ADV7 1423 aa18.67■□□□□ 0.58
TVP23C-210ENST00000584811 ATP2B3Q16720 1220 aa18.67■□□□□ 0.58
TVP23C-210ENST00000584811 TEX13AQ9BXU3 409 aaPredicted RBP18.67■□□□□ 0.58
TVP23C-210ENST00000584811 ALDH8A1Q9H2A2 487 aaPredicted RBP18.67■□□□□ 0.58
TVP23C-210ENST00000584811 CNNM1Q9NRU3 951 aa18.67■□□□□ 0.58
TVP23C-210ENST00000584811 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.67■□□□□ 0.58
TVP23C-210ENST00000584811 RFX7Q2KHR2 1363 aa18.67■□□□□ 0.58
TVP23C-210ENST00000584811 CTSWP56202 376 aa18.66■□□□□ 0.58
TVP23C-210ENST00000584811 DHX32Q7L7V1 743 aaKnown RBP18.66■□□□□ 0.58
TVP23C-210ENST00000584811 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.66■□□□□ 0.58
TVP23C-210ENST00000584811 GUCY1B3Q02153 619 aa18.66■□□□□ 0.58
TVP23C-210ENST00000584811 SMIM5Q71RC9 77 aa18.66■□□□□ 0.58
TVP23C-210ENST00000584811 DSCC1Q9BVC3 393 aa18.66■□□□□ 0.58
TVP23C-210ENST00000584811 NUTM2BA6NNL0 878 aaPredicted RBP18.66■□□□□ 0.58
TVP23C-210ENST00000584811 NUTM2EB1AL46 878 aaPredicted RBP18.66■□□□□ 0.58
TVP23C-210ENST00000584811 KCNQ4P56696 695 aa18.66■□□□□ 0.58
TVP23C-210ENST00000584811 NUTM2AQ8IVF1 878 aaPredicted RBP18.66■□□□□ 0.58
TVP23C-210ENST00000584811 EXOSC10Q01780 885 aaKnown RBP18.65■□□□□ 0.58
TVP23C-210ENST00000584811 PLA2G12BQ9BX93 195 aa18.65■□□□□ 0.58
TVP23C-210ENST00000584811 USP25Q9UHP3 1055 aa18.65■□□□□ 0.58
TVP23C-210ENST00000584811 TAOK2Q9UL54 1235 aa18.65■□□□□ 0.58
TVP23C-210ENST00000584811 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.64■□□□□ 0.57
TVP23C-210ENST00000584811 FGAP02671 866 aa18.64■□□□□ 0.57
TVP23C-210ENST00000584811 PHKA1P46020 1223 aa18.64■□□□□ 0.57
TVP23C-210ENST00000584811 KRT85P78386 507 aa18.64■□□□□ 0.57
TVP23C-210ENST00000584811 SEC31BQ9NQW1 1179 aa18.64■□□□□ 0.57
TVP23C-210ENST00000584811 AKAP2Q9Y2D5 859 aa18.64■□□□□ 0.57
TVP23C-210ENST00000584811 SLIT2O94813 1529 aa18.64■□□□□ 0.57
TVP23C-210ENST00000584811 NSUN7Q8NE18 718 aaKnown RBP18.63■□□□□ 0.57
TVP23C-210ENST00000584811 ZSCAN30Q86W11 494 aa18.63■□□□□ 0.57
TVP23C-210ENST00000584811 NAP1L5Q96NT1 182 aaPredicted RBP18.63■□□□□ 0.57
TVP23C-210ENST00000584811 PDCP20941 246 aa18.63■□□□□ 0.57
TVP23C-210ENST00000584811 VGLL2Q8N8G2 317 aa18.63■□□□□ 0.57
TVP23C-210ENST00000584811 PIH1D3Q9NQM4 214 aaKnown RBP18.63■□□□□ 0.57
TVP23C-210ENST00000584811 ANKRD18BA2A2Z9 1011 aa18.62■□□□□ 0.57
TVP23C-210ENST00000584811 PTPDC1A2A3K4 754 aa18.62■□□□□ 0.57
TVP23C-210ENST00000584811 SUSD4Q5VX71 490 aa18.62■□□□□ 0.57
TVP23C-210ENST00000584811 KCNQ2O43526 872 aa18.62■□□□□ 0.57
TVP23C-210ENST00000584811 IDH1O75874 414 aaKnown RBP18.62■□□□□ 0.57
TVP23C-210ENST00000584811 PLCB2Q00722 1185 aa18.62■□□□□ 0.57
TVP23C-210ENST00000584811 OTUD7BQ6GQQ9 843 aa18.62■□□□□ 0.57
TVP23C-210ENST00000584811 CKAP2LQ8IYA6 745 aa18.62■□□□□ 0.57
TVP23C-210ENST00000584811 SPATA32Q96LK8 384 aa18.62■□□□□ 0.57
TVP23C-210ENST00000584811 GJB4Q9NTQ9 266 aa18.62■□□□□ 0.57
TVP23C-210ENST00000584811 LAMA4Q16363 1823 aa18.61■□□□□ 0.57
TVP23C-210ENST00000584811 H3BQV1 296 aa18.61■□□□□ 0.57
TVP23C-210ENST00000584811 GPAA1O43292 621 aa18.61■□□□□ 0.57
TVP23C-210ENST00000584811 PHF14O94880 888 aa18.61■□□□□ 0.57
TVP23C-210ENST00000584811 IFFO2Q5TF58 517 aa18.61■□□□□ 0.57
TVP23C-210ENST00000584811 LEO1Q8WVC0 666 aaPredicted RBP18.61■□□□□ 0.57
TVP23C-210ENST00000584811 PGBD1Q96JS3 809 aa18.61■□□□□ 0.57
TVP23C-210ENST00000584811 INCENPQ9NQS7 918 aa18.61■□□□□ 0.57
TVP23C-210ENST00000584811 GOLGB1Q14789 3259 aaKnown RBP18.61■□□□□ 0.57
TVP23C-210ENST00000584811 PFKFB2O60825 505 aa18.61■□□□□ 0.57
TVP23C-210ENST00000584811 PDIA3P30101 505 aaKnown RBP18.61■□□□□ 0.57
TVP23C-210ENST00000584811 ATP6V1AP38606 617 aa18.61■□□□□ 0.57
TVP23C-210ENST00000584811 ITPK1Q13572 414 aa18.61■□□□□ 0.57
TVP23C-210ENST00000584811 INTS5Q6P9B9 1019 aaKnown RBP18.61■□□□□ 0.57
TVP23C-210ENST00000584811 MARCH10Q8NA82 808 aaPredicted RBP18.61■□□□□ 0.57
TVP23C-210ENST00000584811 FAM184AQ8NB25 1140 aa18.61■□□□□ 0.57
TVP23C-210ENST00000584811 ZNF830Q96NB3 372 aaPredicted RBP18.61■□□□□ 0.57
TVP23C-210ENST00000584811 WTIPA6NIX2 430 aaPredicted RBP18.6■□□□□ 0.57
TVP23C-210ENST00000584811 RESTQ13127 1097 aa18.6■□□□□ 0.57
TVP23C-210ENST00000584811 SLC9C2Q5TAH2 1124 aa18.6■□□□□ 0.57
TVP23C-210ENST00000584811 FUCA2Q9BTY2 467 aa18.6■□□□□ 0.57
TVP23C-210ENST00000584811 DACT1Q9NYF0 836 aa18.6■□□□□ 0.57
TVP23C-210ENST00000584811 AP5Z1O43299 807 aa18.6■□□□□ 0.57
TVP23C-210ENST00000584811 WWC3Q9ULE0 1092 aa18.6■□□□□ 0.57
TVP23C-210ENST00000584811 CDHR2Q9BYE9 1310 aa18.6■□□□□ 0.57
TVP23C-210ENST00000584811 CRKLP46109 303 aaKnown RBP18.6■□□□□ 0.57
TVP23C-210ENST00000584811 CCDC102BQ68D86 513 aa18.6■□□□□ 0.57
TVP23C-210ENST00000584811 ROBO1Q9Y6N7 1651 aa18.59■□□□□ 0.57
TVP23C-210ENST00000584811 LRP6O75581 1613 aa18.59■□□□□ 0.57
TVP23C-210ENST00000584811 PDE8BO95263 885 aa18.59■□□□□ 0.57
TVP23C-210ENST00000584811 DDB1Q16531 1140 aa18.59■□□□□ 0.57
TVP23C-210ENST00000584811 SMARCC2Q8TAQ2 1214 aa18.59■□□□□ 0.57
TVP23C-210ENST00000584811 NBPF3Q9H094 633 aa18.59■□□□□ 0.57
TVP23C-210ENST00000584811 COL16A1Q07092 1604 aaPredicted RBP18.59■□□□□ 0.57
TVP23C-210ENST00000584811 KDM4AO75164 1064 aa18.59■□□□□ 0.57
TVP23C-210ENST00000584811 ZNF34Q8IZ26 560 aa18.59■□□□□ 0.57
TVP23C-210ENST00000584811 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.59■□□□□ 0.57
TVP23C-210ENST00000584811 PDE8AO60658 829 aa18.58■□□□□ 0.57
TVP23C-210ENST00000584811 NR1I2O75469 434 aa18.58■□□□□ 0.57
TVP23C-210ENST00000584811 APPBP2Q92624 585 aa18.58■□□□□ 0.57
TVP23C-210ENST00000584811 IL6STP40189 918 aaPredicted RBP18.58■□□□□ 0.56
TVP23C-210ENST00000584811 ANTXR2P58335 489 aa18.58■□□□□ 0.56
TVP23C-210ENST00000584811 RXRAP19793 462 aa18.57■□□□□ 0.56
TVP23C-210ENST00000584811 MSNP26038 577 aaKnown RBP18.57■□□□□ 0.56
TVP23C-210ENST00000584811 EIF5P55010 431 aaKnown RBP18.57■□□□□ 0.56
TVP23C-210ENST00000584811 AGXT2Q9BYV1 514 aa18.57■□□□□ 0.56
TVP23C-210ENST00000584811 NWD2Q9ULI1 1742 aa18.57■□□□□ 0.56
TVP23C-210ENST00000584811 HMGB1P09429 215 aaKnown RBP18.57■□□□□ 0.56
TVP23C-210ENST00000584811 FDPSP14324 419 aaKnown RBP18.57■□□□□ 0.56
TVP23C-210ENST00000584811 EP400Q96L91 3159 aa18.57■□□□□ 0.56
TVP23C-210ENST00000584811 MYO5AQ9Y4I1 1855 aaKnown RBP18.57■□□□□ 0.56
TVP23C-210ENST00000584811 PTF1AQ7RTS3 328 aa18.57■□□□□ 0.56
TVP23C-210ENST00000584811 SENP2Q9HC62 589 aa18.57■□□□□ 0.56
TVP23C-210ENST00000584811 IQSEC3Q9UPP2 1182 aaPredicted RBP18.57■□□□□ 0.56
TVP23C-210ENST00000584811 SPATA31A1Q5TZJ5 1347 aa18.56■□□□□ 0.56
TVP23C-210ENST00000584811 ZNF532Q9HCE3 1301 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms