RNA–Protein interactions for RNA: ENST00000584773.5

SRSF1-208, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5 BASIC

Gene SRSF1, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-208ENST00000584773 FBXW7Q969H0 707 aa22.79■■□□□ 1.24
SRSF1-208ENST00000584773 ANKRD2Q9GZV1 360 aa22.79■■□□□ 1.24
SRSF1-208ENST00000584773 USP17L3A6NCW0 530 aa22.78■■□□□ 1.24
SRSF1-208ENST00000584773 USP17L4A6NCW7 530 aa22.78■■□□□ 1.24
SRSF1-208ENST00000584773 RASSF10A6NK89 507 aa22.78■■□□□ 1.24
SRSF1-208ENST00000584773 CELF2O95319 508 aaKnown RBP22.78■■□□□ 1.24
SRSF1-208ENST00000584773 USP17L1Q7RTZ2 530 aa22.78■■□□□ 1.24
SRSF1-208ENST00000584773 USP48Q86UV5 1035 aa22.78■■□□□ 1.24
SRSF1-208ENST00000584773 ZC3H15Q8WU90 426 aaKnown RBP22.78■■□□□ 1.24
SRSF1-208ENST00000584773 GMLQ99445 158 aa22.78■■□□□ 1.24
SRSF1-208ENST00000584773 ZNF408Q9H9D4 720 aa22.78■■□□□ 1.24
SRSF1-208ENST00000584773 UTYO14607 1347 aa22.77■■□□□ 1.24
SRSF1-208ENST00000584773 KCNJ4P48050 445 aa22.77■■□□□ 1.24
SRSF1-208ENST00000584773 CCDC57Q2TAC2 916 aa22.77■■□□□ 1.24
SRSF1-208ENST00000584773 DEFB115Q30KQ5 88 aa22.77■■□□□ 1.24
SRSF1-208ENST00000584773 ALDH1L2Q3SY69 923 aa22.77■■□□□ 1.24
SRSF1-208ENST00000584773 DIEXFQ68CQ4 756 aaKnown RBP22.77■■□□□ 1.24
SRSF1-208ENST00000584773 BICC1Q9H694 974 aaKnown RBP22.77■■□□□ 1.24
SRSF1-208ENST00000584773 IRS2Q9Y4H2 1338 aa22.76■■□□□ 1.23
SRSF1-208ENST00000584773 ADM5C9JUS6 153 aa22.76■■□□□ 1.23
SRSF1-208ENST00000584773 PLIN1O60240 522 aa22.76■■□□□ 1.23
SRSF1-208ENST00000584773 TAF7LQ5H9L4 462 aa22.76■■□□□ 1.23
SRSF1-208ENST00000584773 AGBL3Q8NEM8 1001 aa22.76■■□□□ 1.23
SRSF1-208ENST00000584773 COA1Q9GZY4 146 aa22.76■■□□□ 1.23
SRSF1-208ENST00000584773 ZNF609O15014 1411 aa22.76■■□□□ 1.23
SRSF1-208ENST00000584773 ZNF280AP59817 542 aaPredicted RBP22.75■■□□□ 1.23
SRSF1-208ENST00000584773 DACT2Q5SW24 774 aa22.75■■□□□ 1.23
SRSF1-208ENST00000584773 CDC37L1Q7L3B6 337 aa22.75■■□□□ 1.23
SRSF1-208ENST00000584773 ANKRD44Q8N8A2 993 aa22.75■■□□□ 1.23
SRSF1-208ENST00000584773 PUS3Q9BZE2 481 aaKnown RBP22.75■■□□□ 1.23
SRSF1-208ENST00000584773 GRM1Q13255 1194 aa22.74■■□□□ 1.23
SRSF1-208ENST00000584773 LDHAL6AQ6ZMR3 332 aa22.74■■□□□ 1.23
SRSF1-208ENST00000584773 PAXIP1Q6ZW49 1069 aaPredicted RBP22.74■■□□□ 1.23
SRSF1-208ENST00000584773 CNNM1Q9NRU3 951 aa22.74■■□□□ 1.23
SRSF1-208ENST00000584773 GGA3Q9NZ52 723 aa22.74■■□□□ 1.23
SRSF1-208ENST00000584773 USP17L8P0C7I0 530 aa22.73■■□□□ 1.23
SRSF1-208ENST00000584773 CYP4F22Q6NT55 531 aa22.73■■□□□ 1.23
SRSF1-208ENST00000584773 KRT26Q7Z3Y9 468 aa22.73■■□□□ 1.23
SRSF1-208ENST00000584773 USP44Q9H0E7 712 aa22.73■■□□□ 1.23
SRSF1-208ENST00000584773 NOB1Q9ULX3 412 aaKnown RBP22.73■■□□□ 1.23
SRSF1-208ENST00000584773 SCAF8Q9UPN6 1271 aaKnown RBP22.73■■□□□ 1.23
SRSF1-208ENST00000584773 TLL2Q9Y6L7 1015 aa22.73■■□□□ 1.23
SRSF1-208ENST00000584773 WDR33Q9C0J8 1336 aaKnown RBP22.72■■□□□ 1.23
SRSF1-208ENST00000584773 COL13A1Q5TAT6 717 aaPredicted RBP22.72■■□□□ 1.23
SRSF1-208ENST00000584773 MYOZ2Q9NPC6 264 aa22.72■■□□□ 1.23
SRSF1-208ENST00000584773 GTF2IP78347 998 aa22.71■■□□□ 1.23
SRSF1-208ENST00000584773 SCARF1Q14162 830 aa22.71■■□□□ 1.23
SRSF1-208ENST00000584773 RABL6Q3YEC7 729 aaPredicted RBP22.71■■□□□ 1.23
SRSF1-208ENST00000584773 STRIP1Q5VSL9 837 aa22.71■■□□□ 1.23
SRSF1-208ENST00000584773 DCPSQ96C86 337 aaKnown RBP22.71■■□□□ 1.23
SRSF1-208ENST00000584773 CD209Q9NNX6 404 aa22.71■■□□□ 1.23
SRSF1-208ENST00000584773 ANGEL2Q5VTE6 544 aaKnown RBP22.7■■□□□ 1.22
SRSF1-208ENST00000584773 TTLL5Q6EMB2 1281 aa22.7■■□□□ 1.22
SRSF1-208ENST00000584773 KLHDC4Q8TBB5 520 aa22.7■■□□□ 1.22
SRSF1-208ENST00000584773 CAPNS2Q96L46 248 aa22.7■■□□□ 1.22
SRSF1-208ENST00000584773 FOXN1O15353 648 aa22.69■■□□□ 1.22
SRSF1-208ENST00000584773 RARSP54136 660 aaKnown RBP22.69■■□□□ 1.22
SRSF1-208ENST00000584773 SAPCD2Q86UD0 394 aa22.69■■□□□ 1.22
SRSF1-208ENST00000584773 JAG2Q9Y219 1238 aa22.69■■□□□ 1.22
SRSF1-208ENST00000584773 CT47B1P0C2W7 299 aaPredicted RBP22.68■■□□□ 1.22
SRSF1-208ENST00000584773 LRRC24Q50LG9 513 aa22.68■■□□□ 1.22
SRSF1-208ENST00000584773 C15orf52Q6ZUT6 534 aaKnown RBP22.68■■□□□ 1.22
SRSF1-208ENST00000584773 THSD7BQ9C0I4 1608 aa22.68■■□□□ 1.22
SRSF1-208ENST00000584773 AOC2O75106 756 aa22.67■■□□□ 1.22
SRSF1-208ENST00000584773 NBPF9Q3BBW0 867 aa22.67■■□□□ 1.22
SRSF1-208ENST00000584773 KIAA0825Q8IV33 1275 aa22.67■■□□□ 1.22
SRSF1-208ENST00000584773 CERS5Q8N5B7 392 aa22.67■■□□□ 1.22
SRSF1-208ENST00000584773 SULF1Q8IWU6 871 aa22.66■■□□□ 1.22
SRSF1-208ENST00000584773 RIPOR2Q9Y4F9 1068 aa22.66■■□□□ 1.22
SRSF1-208ENST00000584773 SASH1O94885 1247 aa22.65■■□□□ 1.22
SRSF1-208ENST00000584773 HNRNPUQ00839 825 aaKnown RBP eCLIP22.65■■□□□ 1.22
SRSF1-208ENST00000584773 MYO3BQ8WXR4 1341 aa22.65■■□□□ 1.22
SRSF1-208ENST00000584773 GYG1P46976 350 aa22.64■■□□□ 1.22
SRSF1-208ENST00000584773 IFFO2Q5TF58 517 aa22.64■■□□□ 1.22
SRSF1-208ENST00000584773 ZNF804AQ7Z570 1209 aa22.64■■□□□ 1.22
SRSF1-208ENST00000584773 CDCA5Q96FF9 252 aa22.64■■□□□ 1.22
SRSF1-208ENST00000584773 WBP1LQ9NX94 342 aa22.64■■□□□ 1.22
SRSF1-208ENST00000584773 TNNQ9UQP3 1299 aa22.64■■□□□ 1.22
SRSF1-208ENST00000584773 IL1R1P14778 569 aa22.63■■□□□ 1.21
SRSF1-208ENST00000584773 BRPF1P55201 1214 aaPredicted RBP22.63■■□□□ 1.21
SRSF1-208ENST00000584773 OGFOD1Q8N543 542 aa22.63■■□□□ 1.21
SRSF1-208ENST00000584773 PCDHAC2Q9Y5I4 1007 aa22.63■■□□□ 1.21
SRSF1-208ENST00000584773 F8W031 263 aaPredicted RBP22.62■■□□□ 1.21
SRSF1-208ENST00000584773 WNT10BO00744 389 aa22.62■■□□□ 1.21
SRSF1-208ENST00000584773 ECE1P42892 770 aa22.62■■□□□ 1.21
SRSF1-208ENST00000584773 RFX5P48382 616 aaPredicted RBP22.62■■□□□ 1.21
SRSF1-208ENST00000584773 HUNKP57058 714 aa22.62■■□□□ 1.21
SRSF1-208ENST00000584773 PRAMEF18Q5VWM3 479 aa22.62■■□□□ 1.21
SRSF1-208ENST00000584773 API5Q9BZZ5 524 aaKnown RBP22.62■■□□□ 1.21
SRSF1-208ENST00000584773 GBA2Q9HCG7 927 aaPredicted RBP22.62■■□□□ 1.21
SRSF1-208ENST00000584773 BCAR3O75815 825 aa22.61■■□□□ 1.21
SRSF1-208ENST00000584773 UBE4AQ14139 1066 aa22.61■■□□□ 1.21
SRSF1-208ENST00000584773 METTL24Q5JXM2 366 aa22.61■■□□□ 1.21
SRSF1-208ENST00000584773 MROH5Q6ZUA9 1318 aa22.61■■□□□ 1.21
SRSF1-208ENST00000584773 UBTFL1P0CB47 393 aaPredicted RBP22.6■■□□□ 1.21
SRSF1-208ENST00000584773 VGLL2Q8N8G2 317 aa22.6■■□□□ 1.21
SRSF1-208ENST00000584773 AIDAQ96BJ3 306 aa22.6■■□□□ 1.21
SRSF1-208ENST00000584773 FAM84BQ96KN1 310 aaPredicted RBP22.6■■□□□ 1.21
SRSF1-208ENST00000584773 ZIC5Q96T25 663 aa22.6■■□□□ 1.21
SRSF1-208ENST00000584773 MEIS3Q99687 375 aa22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms