RNA–Protein interactions for RNA: ENST00000583796.1

IFT20-213, Transcript of intraflagellar transport 20, humanhuman

Gene IFT20, Length 1,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-213ENST00000583796 ANKRD18AQ8IVF6 992 aa12.27□□□□□ -0.44
IFT20-213ENST00000583796 FAM227BQ96M60 508 aa12.27□□□□□ -0.44
IFT20-213ENST00000583796 NLRP3Q96P20 1036 aa12.27□□□□□ -0.44
IFT20-213ENST00000583796 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.27□□□□□ -0.44
IFT20-213ENST00000583796 CWC22Q9HCG8 908 aaKnown RBP12.27□□□□□ -0.44
IFT20-213ENST00000583796 BSDC1Q9NW68 430 aaPredicted RBP12.27□□□□□ -0.44
IFT20-213ENST00000583796 PALD1Q9ULE6 856 aa12.27□□□□□ -0.44
IFT20-213ENST00000583796 MYH7P12883 1935 aa12.27□□□□□ -0.45
IFT20-213ENST00000583796 CD2BP2O95400 341 aaKnown RBP12.27□□□□□ -0.45
IFT20-213ENST00000583796 PSMA5P28066 241 aa12.27□□□□□ -0.45
IFT20-213ENST00000583796 KCNQ4P56696 695 aa12.27□□□□□ -0.45
IFT20-213ENST00000583796 KRT32Q14532 448 aa12.27□□□□□ -0.45
IFT20-213ENST00000583796 SLKQ9H2G2 1235 aaPredicted RBP12.27□□□□□ -0.45
IFT20-213ENST00000583796 SNX14Q9Y5W7 946 aa12.27□□□□□ -0.45
IFT20-213ENST00000583796 AKAP11Q9UKA4 1901 aa12.26□□□□□ -0.45
IFT20-213ENST00000583796 FAM177BA6PVY3 158 aa12.26□□□□□ -0.45
IFT20-213ENST00000583796 RNF113AO15541 343 aaKnown RBP12.26□□□□□ -0.45
IFT20-213ENST00000583796 TAF5LO75529 589 aa12.26□□□□□ -0.45
IFT20-213ENST00000583796 ZMYM1Q5SVZ6 1142 aa12.26□□□□□ -0.45
IFT20-213ENST00000583796 INTS4Q96HW7 963 aaKnown RBP12.26□□□□□ -0.45
IFT20-213ENST00000583796 DSCC1Q9BVC3 393 aa12.26□□□□□ -0.45
IFT20-213ENST00000583796 LRRC4BQ9NT99 713 aa12.26□□□□□ -0.45
IFT20-213ENST00000583796 RBM8AQ9Y5S9 174 aaKnown RBP12.26□□□□□ -0.45
IFT20-213ENST00000583796 IGSF3O75054 1194 aa12.25□□□□□ -0.45
IFT20-213ENST00000583796 TRIM37O94972 964 aa12.25□□□□□ -0.45
IFT20-213ENST00000583796 RXRBP28702 533 aa12.25□□□□□ -0.45
IFT20-213ENST00000583796 ADORA1P30542 326 aa12.25□□□□□ -0.45
IFT20-213ENST00000583796 KCNJ4P48050 445 aa12.25□□□□□ -0.45
IFT20-213ENST00000583796 PTH1RQ03431 593 aa12.25□□□□□ -0.45
IFT20-213ENST00000583796 UBE4AQ14139 1066 aa12.25□□□□□ -0.45
IFT20-213ENST00000583796 CCDC102BQ68D86 513 aa12.25□□□□□ -0.45
IFT20-213ENST00000583796 EDC3Q96F86 508 aaKnown RBP12.25□□□□□ -0.45
IFT20-213ENST00000583796 SRP68Q9UHB9 627 aaKnown RBP12.25□□□□□ -0.45
IFT20-213ENST00000583796 RPAP1Q9BWH6 1393 aaPredicted RBP12.25□□□□□ -0.45
IFT20-213ENST00000583796 DOCK2Q92608 1830 aa12.24□□□□□ -0.45
IFT20-213ENST00000583796 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.24□□□□□ -0.45
IFT20-213ENST00000583796 CUL4AQ13619 759 aa12.24□□□□□ -0.45
IFT20-213ENST00000583796 VPS53Q5VIR6 699 aa12.24□□□□□ -0.45
IFT20-213ENST00000583796 CREB3L3Q68CJ9 461 aa12.24□□□□□ -0.45
IFT20-213ENST00000583796 PRPF40BQ6NWY9 871 aaKnown RBP12.24□□□□□ -0.45
IFT20-213ENST00000583796 FLAD1Q8NFF5 587 aa12.24□□□□□ -0.45
IFT20-213ENST00000583796 ANKRD2Q9GZV1 360 aa12.24□□□□□ -0.45
IFT20-213ENST00000583796 ZSWIM6Q9HCJ5 1215 aa12.24□□□□□ -0.45
IFT20-213ENST00000583796 SEC31BQ9NQW1 1179 aa12.24□□□□□ -0.45
IFT20-213ENST00000583796 MCAMP43121 646 aa12.23□□□□□ -0.45
IFT20-213ENST00000583796 NUCB2P80303 420 aa12.23□□□□□ -0.45
IFT20-213ENST00000583796 FKBP4Q02790 459 aaKnown RBP eCLIP12.23□□□□□ -0.45
IFT20-213ENST00000583796 CHRNDQ07001 517 aa12.23□□□□□ -0.45
IFT20-213ENST00000583796 UBE3CQ15386 1083 aa12.23□□□□□ -0.45
IFT20-213ENST00000583796 NFKBIBQ15653 356 aa12.23□□□□□ -0.45
IFT20-213ENST00000583796 TXNRD1Q16881 649 aa12.23□□□□□ -0.45
IFT20-213ENST00000583796 CHADLQ6NUI6 762 aa12.23□□□□□ -0.45
IFT20-213ENST00000583796 TMED8Q6PL24 325 aaPredicted RBP12.23□□□□□ -0.45
IFT20-213ENST00000583796 BICDL1Q6ZP65 573 aa12.23□□□□□ -0.45
IFT20-213ENST00000583796 ZNF589Q86UQ0 364 aaPredicted RBP12.23□□□□□ -0.45
IFT20-213ENST00000583796 CNBD1Q8NA66 436 aa12.23□□□□□ -0.45
IFT20-213ENST00000583796 APPBP2Q92624 585 aa12.23□□□□□ -0.45
IFT20-213ENST00000583796 TTC14Q96N46 770 aa12.23□□□□□ -0.45
IFT20-213ENST00000583796 ALDH8A1Q9H2A2 487 aaPredicted RBP12.23□□□□□ -0.45
IFT20-213ENST00000583796 CYP46A1Q9Y6A2 500 aa12.23□□□□□ -0.45
IFT20-213ENST00000583796 ZNF804BA4D1E1 1349 aa12.23□□□□□ -0.45
IFT20-213ENST00000583796 PDS5AQ29RF7 1337 aaKnown RBP12.23□□□□□ -0.45
IFT20-213ENST00000583796 C19orf67A6NJJ6 358 aa12.22□□□□□ -0.45
IFT20-213ENST00000583796 SLC27A2O14975 620 aa12.22□□□□□ -0.45
IFT20-213ENST00000583796 SEMA3EO15041 775 aa12.22□□□□□ -0.45
IFT20-213ENST00000583796 ZAP70P43403 619 aa12.22□□□□□ -0.45
IFT20-213ENST00000583796 NFIXQ14938 502 aa12.22□□□□□ -0.45
IFT20-213ENST00000583796 ANKRD1Q15327 319 aa12.22□□□□□ -0.45
IFT20-213ENST00000583796 RASEFQ8IZ41 740 aa12.22□□□□□ -0.45
IFT20-213ENST00000583796 TMX3Q96JJ7 454 aa12.22□□□□□ -0.45
IFT20-213ENST00000583796 GNL3LQ9NVN8 582 aaKnown RBP12.22□□□□□ -0.45
IFT20-213ENST00000583796 TNS1Q9HBL0 1735 aaKnown RBP12.22□□□□□ -0.45
IFT20-213ENST00000583796 MAST3O60307 1309 aa12.22□□□□□ -0.45
IFT20-213ENST00000583796 PHF14O94880 888 aa12.21□□□□□ -0.45
IFT20-213ENST00000583796 HMGB1P09429 215 aaKnown RBP12.21□□□□□ -0.45
IFT20-213ENST00000583796 GYS1P13807 737 aa12.21□□□□□ -0.45
IFT20-213ENST00000583796 RPS8P62241 208 aaKnown RBP12.21□□□□□ -0.45
IFT20-213ENST00000583796 RAB3GAP1Q15042 981 aa12.21□□□□□ -0.45
IFT20-213ENST00000583796 RUFY3Q7L099 469 aa12.21□□□□□ -0.45
IFT20-213ENST00000583796 AMIGO3Q86WK7 504 aa12.21□□□□□ -0.45
IFT20-213ENST00000583796 ZSCAN31Q96LW9 406 aaPredicted RBP12.21□□□□□ -0.45
IFT20-213ENST00000583796 CTNNA3Q9UI47 895 aa12.21□□□□□ -0.45
IFT20-213ENST00000583796 TNRC6CQ9HCJ0 1690 aaKnown RBP12.21□□□□□ -0.45
IFT20-213ENST00000583796 NPHP1O15259 732 aa12.21□□□□□ -0.46
IFT20-213ENST00000583796 PDIA4P13667 645 aaKnown RBP12.21□□□□□ -0.46
IFT20-213ENST00000583796 CASTP20810 708 aaKnown RBP12.21□□□□□ -0.46
IFT20-213ENST00000583796 PTMSP20962 102 aa12.21□□□□□ -0.46
IFT20-213ENST00000583796 PHKA1P46020 1223 aa12.21□□□□□ -0.46
IFT20-213ENST00000583796 ST5P78524 1137 aa12.21□□□□□ -0.46
IFT20-213ENST00000583796 SCARF1Q14162 830 aa12.21□□□□□ -0.46
IFT20-213ENST00000583796 SPATA5Q8NB90 893 aa12.21□□□□□ -0.46
IFT20-213ENST00000583796 JAKMIP1Q96N16 626 aaKnown RBP12.21□□□□□ -0.46
IFT20-213ENST00000583796 UPF3BQ9BZI7 483 aaKnown RBP12.21□□□□□ -0.46
IFT20-213ENST00000583796 SH2B1Q9NRF2 756 aaPredicted RBP12.21□□□□□ -0.46
IFT20-213ENST00000583796 MINPP1Q9UNW1 487 aa12.21□□□□□ -0.46
IFT20-213ENST00000583796 LIMCH1Q9UPQ0 1083 aa12.21□□□□□ -0.46
IFT20-213ENST00000583796 NDUFB9Q9Y6M9 179 aa12.21□□□□□ -0.46
IFT20-213ENST00000583796 CYP2E1P05181 493 aaPredicted RBP12.2□□□□□ -0.46
IFT20-213ENST00000583796 TM4SF1P30408 202 aa12.2□□□□□ -0.46
IFT20-213ENST00000583796 ADD2P35612 726 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms