RNA–Protein interactions for RNA: ENST00000583577.1

MKS1-212, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-212ENST00000583577 PRAMEF18Q5VWM3 479 aa12.36□□□□□ -0.43
MKS1-212ENST00000583577 CD99L2Q8TCZ2 262 aa12.36□□□□□ -0.43
MKS1-212ENST00000583577 DUOX1Q9NRD9 1551 aa12.35□□□□□ -0.43
MKS1-212ENST00000583577 BBOX1O75936 387 aa12.35□□□□□ -0.43
MKS1-212ENST00000583577 NTSR2O95665 410 aa12.35□□□□□ -0.43
MKS1-212ENST00000583577 WASHC4Q2M389 1173 aa12.35□□□□□ -0.43
MKS1-212ENST00000583577 ERO1AQ96HE7 468 aa12.35□□□□□ -0.43
MKS1-212ENST00000583577 COL25A1Q9BXS0 654 aaPredicted RBP12.35□□□□□ -0.43
MKS1-212ENST00000583577 EFCC1Q9HA90 598 aa12.35□□□□□ -0.43
MKS1-212ENST00000583577 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.35□□□□□ -0.43
MKS1-212ENST00000583577 IBTKQ9P2D0 1353 aaPredicted RBP12.34□□□□□ -0.43
MKS1-212ENST00000583577 PLIN1O60240 522 aa12.34□□□□□ -0.43
MKS1-212ENST00000583577 ALDH1A1P00352 501 aa12.34□□□□□ -0.43
MKS1-212ENST00000583577 HOXB7P09629 217 aa12.34□□□□□ -0.43
MKS1-212ENST00000583577 EIF2S2P20042 333 aaKnown RBP12.34□□□□□ -0.43
MKS1-212ENST00000583577 DOK7Q18PE1 504 aa12.34□□□□□ -0.43
MKS1-212ENST00000583577 KIF6Q6ZMV9 814 aa12.34□□□□□ -0.43
MKS1-212ENST00000583577 TSR2Q969E8 191 aaKnown RBP12.34□□□□□ -0.43
MKS1-212ENST00000583577 LRCH3Q96II8 777 aa12.34□□□□□ -0.43
MKS1-212ENST00000583577 ZNF333Q96JL9 665 aa12.34□□□□□ -0.43
MKS1-212ENST00000583577 ZBTB3Q9H5J0 574 aa12.34□□□□□ -0.43
MKS1-212ENST00000583577 MYH16Q9H6N6 1097 aa12.34□□□□□ -0.43
MKS1-212ENST00000583577 ERBB4Q15303 1308 aa12.34□□□□□ -0.43
MKS1-212ENST00000583577 MAP3K15Q6ZN16 1313 aa12.34□□□□□ -0.43
MKS1-212ENST00000583577 RTL9Q8NET4 1388 aa12.33□□□□□ -0.44
MKS1-212ENST00000583577 SPTBN5Q9NRC6 3674 aaKnown RBP12.33□□□□□ -0.44
MKS1-212ENST00000583577 ERVV-1B6SEH8 477 aa12.33□□□□□ -0.44
MKS1-212ENST00000583577 SOX1O00570 391 aaPredicted RBP12.33□□□□□ -0.44
MKS1-212ENST00000583577 ECE2O60344 883 aa12.33□□□□□ -0.44
MKS1-212ENST00000583577 TCIRG1Q13488 830 aa12.33□□□□□ -0.44
MKS1-212ENST00000583577 NBR1Q14596 966 aa12.33□□□□□ -0.44
MKS1-212ENST00000583577 KRT24Q2M2I5 525 aa12.33□□□□□ -0.44
MKS1-212ENST00000583577 TTLL7Q6ZT98 887 aa12.33□□□□□ -0.44
MKS1-212ENST00000583577 CHMP4AQ9BY43 222 aa12.33□□□□□ -0.44
MKS1-212ENST00000583577 ZNF609O15014 1411 aa12.32□□□□□ -0.44
MKS1-212ENST00000583577 C6orf229H3BNL8 230 aa12.32□□□□□ -0.44
MKS1-212ENST00000583577 ELL2O00472 640 aaPredicted RBP12.32□□□□□ -0.44
MKS1-212ENST00000583577 PRKG1Q13976 671 aa12.32□□□□□ -0.44
MKS1-212ENST00000583577 SLC9C1Q4G0N8 1177 aa12.32□□□□□ -0.44
MKS1-212ENST00000583577 HDGFL1Q5TGJ6 251 aa12.32□□□□□ -0.44
MKS1-212ENST00000583577 DDX46Q7L014 1031 aaKnown RBP12.32□□□□□ -0.44
MKS1-212ENST00000583577 PPP1R42Q7Z4L9 355 aa12.32□□□□□ -0.44
MKS1-212ENST00000583577 LRRC37AA6NMS7 1700 aa12.31□□□□□ -0.44
MKS1-212ENST00000583577 WTIPA6NIX2 430 aaPredicted RBP12.31□□□□□ -0.44
MKS1-212ENST00000583577 MYL6BP14649 208 aa12.31□□□□□ -0.44
MKS1-212ENST00000583577 PTPN12Q05209 780 aaKnown RBP12.31□□□□□ -0.44
MKS1-212ENST00000583577 C8orf34Q49A92 452 aa12.31□□□□□ -0.44
MKS1-212ENST00000583577 NBPF11Q86T75 865 aa12.31□□□□□ -0.44
MKS1-212ENST00000583577 IFNL1Q8IU54 200 aa12.31□□□□□ -0.44
MKS1-212ENST00000583577 ZNF34Q8IZ26 560 aa12.31□□□□□ -0.44
MKS1-212ENST00000583577 NECTIN2Q92692 538 aa12.31□□□□□ -0.44
MKS1-212ENST00000583577 PSME4Q14997 1843 aa12.3□□□□□ -0.44
MKS1-212ENST00000583577 NF2P35240 595 aa12.3□□□□□ -0.44
MKS1-212ENST00000583577 GRAPQ13588 217 aa12.3□□□□□ -0.44
MKS1-212ENST00000583577 C20orf194Q5TEA3 1177 aa12.3□□□□□ -0.44
MKS1-212ENST00000583577 SPRYD7Q5W111 196 aa12.3□□□□□ -0.44
MKS1-212ENST00000583577 C8orf58Q8NAV2 365 aa12.3□□□□□ -0.44
MKS1-212ENST00000583577 GRAPLQ8TC17 118 aaPredicted RBP12.3□□□□□ -0.44
MKS1-212ENST00000583577 CLUAP1Q96AJ1 413 aa12.3□□□□□ -0.44
MKS1-212ENST00000583577 PRO3102Q9H379 93 aa12.3□□□□□ -0.44
MKS1-212ENST00000583577 SPINK5Q9NQ38 1064 aaPredicted RBP12.3□□□□□ -0.44
MKS1-212ENST00000583577 NSFL1CQ9UNZ2 370 aaKnown RBP12.3□□□□□ -0.44
MKS1-212ENST00000583577 PRUNE2Q8WUY3 3088 aa12.3□□□□□ -0.44
MKS1-212ENST00000583577 VIL1P09327 827 aaKnown RBP12.29□□□□□ -0.44
MKS1-212ENST00000583577 HCLS1P14317 486 aaPredicted RBP12.29□□□□□ -0.44
MKS1-212ENST00000583577 CAP1Q01518 475 aa12.29□□□□□ -0.44
MKS1-212ENST00000583577 BECN1Q14457 450 aa12.29□□□□□ -0.44
MKS1-212ENST00000583577 TWISTNBQ3B726 338 aaPredicted RBP12.29□□□□□ -0.44
MKS1-212ENST00000583577 SLC10A5Q5PT55 438 aa12.29□□□□□ -0.44
MKS1-212ENST00000583577 CCDC30Q5VVM6 783 aa12.29□□□□□ -0.44
MKS1-212ENST00000583577 UTP14AQ9BVJ6 771 aaKnown RBP12.29□□□□□ -0.44
MKS1-212ENST00000583577 DBF4Q9UBU7 674 aaPredicted RBP12.29□□□□□ -0.44
MKS1-212ENST00000583577 PTCH2Q9Y6C5 1203 aa12.29□□□□□ -0.44
MKS1-212ENST00000583577 LAMA2P24043 3122 aaKnown RBP12.28□□□□□ -0.44
MKS1-212ENST00000583577 MANSC4A6NHS7 340 aaPredicted RBP12.28□□□□□ -0.44
MKS1-212ENST00000583577 G3V3G9 751 aa12.28□□□□□ -0.44
MKS1-212ENST00000583577 IGF2BP3O00425 579 aaKnown RBP eCLIP12.28□□□□□ -0.44
MKS1-212ENST00000583577 ZNF280AP59817 542 aaPredicted RBP12.28□□□□□ -0.44
MKS1-212ENST00000583577 SP3Q02447 781 aa12.28□□□□□ -0.44
MKS1-212ENST00000583577 EXOSC9Q06265 439 aaKnown RBP12.28□□□□□ -0.44
MKS1-212ENST00000583577 CRHR2Q13324 411 aa12.28□□□□□ -0.44
MKS1-212ENST00000583577 PARP10Q53GL7 1025 aa12.28□□□□□ -0.44
MKS1-212ENST00000583577 DCAF8Q5TAQ9 597 aa12.28□□□□□ -0.44
MKS1-212ENST00000583577 ARMC9Q7Z3E5 817 aa12.28□□□□□ -0.44
MKS1-212ENST00000583577 TSPYL6Q8N831 410 aa12.28□□□□□ -0.44
MKS1-212ENST00000583577 MYOZ2Q9NPC6 264 aa12.28□□□□□ -0.44
MKS1-212ENST00000583577 CHPF2Q9P2E5 772 aa12.28□□□□□ -0.44
MKS1-212ENST00000583577 POLLQ9UGP5 575 aa12.28□□□□□ -0.44
MKS1-212ENST00000583577 EYSQ5T1H1 3165 aa12.28□□□□□ -0.44
MKS1-212ENST00000583577 ANXA1P04083 346 aa12.27□□□□□ -0.45
MKS1-212ENST00000583577 INHBEP58166 350 aa12.27□□□□□ -0.45
MKS1-212ENST00000583577 PDIA6Q15084 440 aa12.27□□□□□ -0.45
MKS1-212ENST00000583577 GIGYF2Q6Y7W6 1299 aaKnown RBP12.27□□□□□ -0.45
MKS1-212ENST00000583577 EYA3Q99504 573 aa12.27□□□□□ -0.45
MKS1-212ENST00000583577 STK31Q9BXU1 1019 aa12.27□□□□□ -0.45
MKS1-212ENST00000583577 UPF2Q9HAU5 1272 aaKnown RBP12.27□□□□□ -0.45
MKS1-212ENST00000583577 HYPKQ9NX55 129 aa12.27□□□□□ -0.45
MKS1-212ENST00000583577 LAMB1P07942 1786 aa12.27□□□□□ -0.45
MKS1-212ENST00000583577 ZSWIM8A7E2V4 1837 aa12.26□□□□□ -0.45
MKS1-212ENST00000583577 EIF5BO60841 1220 aaKnown RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms