RNA–Protein interactions for RNA: ENST00000583038.5

ERBB2-214, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 2

Gene ERBB2, Length 4,930 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-214ENST00000583038 DDB1Q16531 1140 aa18.67■□□□□ 0.58
ERBB2-214ENST00000583038 TPTE2Q6XPS3 522 aa18.67■□□□□ 0.58
ERBB2-214ENST00000583038 EYA1Q99502 592 aa18.67■□□□□ 0.58
ERBB2-214ENST00000583038 CTR9Q6PD62 1173 aa18.66■□□□□ 0.58
ERBB2-214ENST00000583038 FERMT2Q96AC1 680 aa18.66■□□□□ 0.58
ERBB2-214ENST00000583038 CHMLP26374 656 aa18.66■□□□□ 0.58
ERBB2-214ENST00000583038 TRAPPC8Q9Y2L5 1435 aa18.66■□□□□ 0.58
ERBB2-214ENST00000583038 MAGEB6P1A0A0J9YX57 407 aa18.66■□□□□ 0.58
ERBB2-214ENST00000583038 ACTN2P35609 894 aa18.66■□□□□ 0.58
ERBB2-214ENST00000583038 ISM2Q6H9L7 571 aa18.66■□□□□ 0.58
ERBB2-214ENST00000583038 CCDC186Q7Z3E2 898 aa18.66■□□□□ 0.58
ERBB2-214ENST00000583038 TBX22Q9Y458 520 aa18.66■□□□□ 0.58
ERBB2-214ENST00000583038 FSD2A1L4K1 749 aa18.66■□□□□ 0.58
ERBB2-214ENST00000583038 CBX1P83916 185 aa18.66■□□□□ 0.58
ERBB2-214ENST00000583038 IP6K1Q92551 441 aa18.66■□□□□ 0.58
ERBB2-214ENST00000583038 RLBP1P12271 317 aa18.65■□□□□ 0.58
ERBB2-214ENST00000583038 NOLC1Q14978 699 aaKnown RBP eCLIP18.65■□□□□ 0.58
ERBB2-214ENST00000583038 TSPYL6Q8N831 410 aa18.65■□□□□ 0.58
ERBB2-214ENST00000583038 RTL1A6NKG5 1358 aa18.65■□□□□ 0.58
ERBB2-214ENST00000583038 AK2P54819 239 aa18.65■□□□□ 0.58
ERBB2-214ENST00000583038 DZIP3Q86Y13 1208 aaKnown RBP18.65■□□□□ 0.58
ERBB2-214ENST00000583038 PA2G4Q9UQ80 394 aaKnown RBP18.65■□□□□ 0.58
ERBB2-214ENST00000583038 ZKSCAN5Q9Y2L8 839 aa18.65■□□□□ 0.58
ERBB2-214ENST00000583038 A0A1W2PP64 1363 aa18.65■□□□□ 0.58
ERBB2-214ENST00000583038 PER1O15534 1290 aaPredicted RBP18.65■□□□□ 0.58
ERBB2-214ENST00000583038 GCP02774 474 aa18.65■□□□□ 0.58
ERBB2-214ENST00000583038 AFMP43652 599 aa18.65■□□□□ 0.58
ERBB2-214ENST00000583038 TTLL12Q14166 644 aaPredicted RBP18.65■□□□□ 0.58
ERBB2-214ENST00000583038 KIAA0753Q2KHM9 967 aa18.65■□□□□ 0.58
ERBB2-214ENST00000583038 C16orf71Q8IYS4 520 aaPredicted RBP18.65■□□□□ 0.58
ERBB2-214ENST00000583038 ZNF622Q969S3 477 aaKnown RBP eCLIP18.65■□□□□ 0.58
ERBB2-214ENST00000583038 CTAGE15A4D2H0 777 aa18.64■□□□□ 0.58
ERBB2-214ENST00000583038 CTAGE8P0CG41 777 aa18.64■□□□□ 0.58
ERBB2-214ENST00000583038 KRT13P13646 458 aa18.64■□□□□ 0.58
ERBB2-214ENST00000583038 NAPAP54920 295 aa18.64■□□□□ 0.58
ERBB2-214ENST00000583038 CTAGE6Q86UF2 777 aa18.64■□□□□ 0.58
ERBB2-214ENST00000583038 CTAGE4Q8IX94 777 aa18.64■□□□□ 0.58
ERBB2-214ENST00000583038 NFATC2IPQ8NCF5 419 aa18.64■□□□□ 0.58
ERBB2-214ENST00000583038 ANKRD2Q9GZV1 360 aa18.64■□□□□ 0.58
ERBB2-214ENST00000583038 PRPF4BQ13523 1007 aaKnown RBP18.64■□□□□ 0.57
ERBB2-214ENST00000583038 CARD14Q9BXL6 1004 aa18.64■□□□□ 0.57
ERBB2-214ENST00000583038 GNA11P29992 359 aa18.64■□□□□ 0.57
ERBB2-214ENST00000583038 KRT83P78385 493 aa18.64■□□□□ 0.57
ERBB2-214ENST00000583038 SPECC1LQ69YQ0 1117 aa18.64■□□□□ 0.57
ERBB2-214ENST00000583038 RUFY3Q7L099 469 aa18.64■□□□□ 0.57
ERBB2-214ENST00000583038 HEATR3Q7Z4Q2 680 aa18.64■□□□□ 0.57
ERBB2-214ENST00000583038 OGFOD1Q8N543 542 aa18.64■□□□□ 0.57
ERBB2-214ENST00000583038 HELLSQ9NRZ9 838 aa18.64■□□□□ 0.57
ERBB2-214ENST00000583038 BICDL2A1A5D9 508 aa18.63■□□□□ 0.57
ERBB2-214ENST00000583038 TOM1O60784 492 aa18.63■□□□□ 0.57
ERBB2-214ENST00000583038 STAMBPO95630 424 aa18.63■□□□□ 0.57
ERBB2-214ENST00000583038 ASIC1P78348 528 aa18.63■□□□□ 0.57
ERBB2-214ENST00000583038 TYRO3Q06418 890 aa18.63■□□□□ 0.57
ERBB2-214ENST00000583038 KRT79Q5XKE5 535 aa18.63■□□□□ 0.57
ERBB2-214ENST00000583038 AOX1Q06278 1338 aa18.63■□□□□ 0.57
ERBB2-214ENST00000583038 TACC1O75410 805 aa18.63■□□□□ 0.57
ERBB2-214ENST00000583038 PPFIA3O75145 1194 aa18.63■□□□□ 0.57
ERBB2-214ENST00000583038 GIGYF2Q6Y7W6 1299 aaKnown RBP18.63■□□□□ 0.57
ERBB2-214ENST00000583038 ARFGAP3Q9NP61 516 aa18.63■□□□□ 0.57
ERBB2-214ENST00000583038 IRS4O14654 1257 aaPredicted RBP18.63■□□□□ 0.57
ERBB2-214ENST00000583038 POLR3GO15318 223 aaPredicted RBP18.63■□□□□ 0.57
ERBB2-214ENST00000583038 TUBBP07437 444 aa18.63■□□□□ 0.57
ERBB2-214ENST00000583038 XRCC6P12956 609 aaKnown RBP eCLIP18.63■□□□□ 0.57
ERBB2-214ENST00000583038 AOPEPQ8N6M6 819 aa18.63■□□□□ 0.57
ERBB2-214ENST00000583038 CEP112Q8N8E3 955 aa18.63■□□□□ 0.57
ERBB2-214ENST00000583038 SELENOOQ9BVL4 669 aa18.63■□□□□ 0.57
ERBB2-214ENST00000583038 DNAJC25Q9H1X3 360 aa18.63■□□□□ 0.57
ERBB2-214ENST00000583038 PHACTR3Q96KR7 559 aa18.62■□□□□ 0.57
ERBB2-214ENST00000583038 INSRP06213 1382 aa18.62■□□□□ 0.57
ERBB2-214ENST00000583038 USP26Q9BXU7 913 aa18.62■□□□□ 0.57
ERBB2-214ENST00000583038 RNMTO43148 476 aaKnown RBP18.62■□□□□ 0.57
ERBB2-214ENST00000583038 PPP1R2P41236 205 aa18.62■□□□□ 0.57
ERBB2-214ENST00000583038 SIRT1Q96EB6 747 aa18.62■□□□□ 0.57
ERBB2-214ENST00000583038 BCCIPQ9P287 314 aaKnown RBP eCLIP18.62■□□□□ 0.57
ERBB2-214ENST00000583038 MAP3K19Q56UN5 1328 aa18.62■□□□□ 0.57
ERBB2-214ENST00000583038 PTPDC1A2A3K4 754 aa18.62■□□□□ 0.57
ERBB2-214ENST00000583038 ZBTB7BO15156 539 aaPredicted RBP18.62■□□□□ 0.57
ERBB2-214ENST00000583038 ZNF219Q9P2Y4 722 aaPredicted RBP18.62■□□□□ 0.57
ERBB2-214ENST00000583038 COL17A1Q9UMD9 1497 aaPredicted RBP18.62■□□□□ 0.57
ERBB2-214ENST00000583038 YTHDC2Q9H6S0 1430 aaKnown RBP18.61■□□□□ 0.57
ERBB2-214ENST00000583038 MARCKSP29966 332 aaPredicted RBP18.61■□□□□ 0.57
ERBB2-214ENST00000583038 LMBR1Q8WVP7 490 aa18.61■□□□□ 0.57
ERBB2-214ENST00000583038 PCDH11XQ9BZA7 1347 aa18.61■□□□□ 0.57
ERBB2-214ENST00000583038 PCDH11YQ9BZA8 1340 aa18.61■□□□□ 0.57
ERBB2-214ENST00000583038 KRT86O43790 486 aa18.61■□□□□ 0.57
ERBB2-214ENST00000583038 HOXC9P31274 260 aa18.61■□□□□ 0.57
ERBB2-214ENST00000583038 CWF19L2Q2TBE0 894 aaKnown RBP18.61■□□□□ 0.57
ERBB2-214ENST00000583038 NAP1L4Q99733 375 aaKnown RBP18.61■□□□□ 0.57
ERBB2-214ENST00000583038 KRT2P35908 639 aa18.61■□□□□ 0.57
ERBB2-214ENST00000583038 RRP36Q96EU6 259 aaKnown RBP18.61■□□□□ 0.57
ERBB2-214ENST00000583038 B4DLN1 442 aa18.61■□□□□ 0.57
ERBB2-214ENST00000583038 MRPL12P52815 198 aaKnown RBP18.61■□□□□ 0.57
ERBB2-214ENST00000583038 FMNL3Q8IVF7 1028 aa18.61■□□□□ 0.57
ERBB2-214ENST00000583038 IQUBQ8NA54 791 aa18.61■□□□□ 0.57
ERBB2-214ENST00000583038 ZC3H12CQ9C0D7 883 aaKnown RBP18.61■□□□□ 0.57
ERBB2-214ENST00000583038 RBM28Q9NW13 759 aaKnown RBP18.61■□□□□ 0.57
ERBB2-214ENST00000583038 ZRANB1Q9UGI0 708 aa18.61■□□□□ 0.57
ERBB2-214ENST00000583038 LIG1P18858 919 aa18.6■□□□□ 0.57
ERBB2-214ENST00000583038 SYT1P21579 422 aa18.6■□□□□ 0.57
ERBB2-214ENST00000583038 MAATS1Q7Z4T9 603 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 189.9 ms