RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 DZIP1LQ8IYY4 767 aaKnown RBP15.76■□□□□ 0.11
SMARCE1-218ENST00000582955 A0A1B0GUL6 1792 aa15.76■□□□□ 0.11
SMARCE1-218ENST00000582955 LRRC24Q50LG9 513 aa15.75■□□□□ 0.11
SMARCE1-218ENST00000582955 CHADLQ6NUI6 762 aa15.75■□□□□ 0.11
SMARCE1-218ENST00000582955 PODNQ7Z5L7 613 aa15.75■□□□□ 0.11
SMARCE1-218ENST00000582955 FBXW7Q969H0 707 aa15.75■□□□□ 0.11
SMARCE1-218ENST00000582955 COA1Q9GZY4 146 aa15.75■□□□□ 0.11
SMARCE1-218ENST00000582955 RCAN3Q9UKA8 241 aa15.75■□□□□ 0.11
SMARCE1-218ENST00000582955 MROH5Q6ZUA9 1318 aa15.74■□□□□ 0.11
SMARCE1-218ENST00000582955 METTL24Q5JXM2 366 aa15.74■□□□□ 0.11
SMARCE1-218ENST00000582955 ITPRIPQ8IWB1 547 aa15.74■□□□□ 0.11
SMARCE1-218ENST00000582955 ADARB2Q9NS39 739 aaKnown RBP15.74■□□□□ 0.11
SMARCE1-218ENST00000582955 CNOT7Q9UIV1 285 aaKnown RBP15.74■□□□□ 0.11
SMARCE1-218ENST00000582955 RIPOR2Q9Y4F9 1068 aa15.74■□□□□ 0.11
SMARCE1-218ENST00000582955 SCN9AQ15858 1988 aa15.74■□□□□ 0.11
SMARCE1-218ENST00000582955 USP17L3A6NCW0 530 aa15.73■□□□□ 0.11
SMARCE1-218ENST00000582955 USP17L4A6NCW7 530 aa15.73■□□□□ 0.11
SMARCE1-218ENST00000582955 H7C1D1 291 aa15.73■□□□□ 0.11
SMARCE1-218ENST00000582955 GNAI2P04899 355 aa15.73■□□□□ 0.11
SMARCE1-218ENST00000582955 VIL1P09327 827 aaKnown RBP15.73■□□□□ 0.11
SMARCE1-218ENST00000582955 RPS12P25398 132 aaKnown RBP15.73■□□□□ 0.11
SMARCE1-218ENST00000582955 RFX5P48382 616 aaPredicted RBP15.73■□□□□ 0.11
SMARCE1-218ENST00000582955 USP50Q70EL3 339 aaPredicted RBP15.73■□□□□ 0.11
SMARCE1-218ENST00000582955 USP17L1Q7RTZ2 530 aa15.73■□□□□ 0.11
SMARCE1-218ENST00000582955 MICALL2Q8IY33 904 aa15.73■□□□□ 0.11
SMARCE1-218ENST00000582955 SHTN1A0MZ66 631 aa15.72■□□□□ 0.11
SMARCE1-218ENST00000582955 RLBP1P12271 317 aa15.72■□□□□ 0.11
SMARCE1-218ENST00000582955 PTPN12Q05209 780 aaKnown RBP15.72■□□□□ 0.11
SMARCE1-218ENST00000582955 RSBN1LQ6PCB5 846 aaPredicted RBP15.72■□□□□ 0.11
SMARCE1-218ENST00000582955 ZNF804AQ7Z570 1209 aa15.72■□□□□ 0.11
SMARCE1-218ENST00000582955 DPF2Q92785 391 aa15.72■□□□□ 0.11
SMARCE1-218ENST00000582955 SIL1Q9H173 461 aa15.72■□□□□ 0.11
SMARCE1-218ENST00000582955 EYA2O00167 538 aa15.71■□□□□ 0.11
SMARCE1-218ENST00000582955 UBE4AQ14139 1066 aa15.71■□□□□ 0.11
SMARCE1-218ENST00000582955 MAP1SQ66K74 1059 aaPredicted RBP15.71■□□□□ 0.11
SMARCE1-218ENST00000582955 C15orf52Q6ZUT6 534 aaKnown RBP15.71■□□□□ 0.11
SMARCE1-218ENST00000582955 PANK1Q8TE04 598 aa15.71■□□□□ 0.11
SMARCE1-218ENST00000582955 CD209Q9NNX6 404 aa15.71■□□□□ 0.11
SMARCE1-218ENST00000582955 IRS2Q9Y4H2 1338 aa15.7■□□□□ 0.1
SMARCE1-218ENST00000582955 ADAMTSL1Q8N6G6 1762 aa15.7■□□□□ 0.1
SMARCE1-218ENST00000582955 SRGAP3O43295 1099 aa15.7■□□□□ 0.1
SMARCE1-218ENST00000582955 MS4A1P11836 297 aa15.7■□□□□ 0.1
SMARCE1-218ENST00000582955 APLP1P51693 650 aa15.7■□□□□ 0.1
SMARCE1-218ENST00000582955 TRPM4Q8TD43 1214 aa15.7■□□□□ 0.1
SMARCE1-218ENST00000582955 PA2G4Q9UQ80 394 aaKnown RBP15.7■□□□□ 0.1
SMARCE1-218ENST00000582955 PSME4Q14997 1843 aa15.7■□□□□ 0.1
SMARCE1-218ENST00000582955 PDE8BO95263 885 aa15.69■□□□□ 0.1
SMARCE1-218ENST00000582955 GTF2IP78347 998 aa15.69■□□□□ 0.1
SMARCE1-218ENST00000582955 TBC1D10BQ4KMP7 808 aaPredicted RBP15.69■□□□□ 0.1
SMARCE1-218ENST00000582955 RBM26Q5T8P6 1007 aaKnown RBP15.69■□□□□ 0.1
SMARCE1-218ENST00000582955 STRIP1Q5VSL9 837 aa15.69■□□□□ 0.1
SMARCE1-218ENST00000582955 TTLL5Q6EMB2 1281 aa15.69■□□□□ 0.1
SMARCE1-218ENST00000582955 VGLL2Q8N8G2 317 aa15.69■□□□□ 0.1
SMARCE1-218ENST00000582955 AGBL3Q8NEM8 1001 aa15.69■□□□□ 0.1
SMARCE1-218ENST00000582955 MXD3Q9BW11 206 aa15.69■□□□□ 0.1
SMARCE1-218ENST00000582955 CIAO1O76071 339 aa15.68■□□□□ 0.1
SMARCE1-218ENST00000582955 GYG1P46976 350 aa15.68■□□□□ 0.1
SMARCE1-218ENST00000582955 MTX1Q13505 466 aa15.68■□□□□ 0.1
SMARCE1-218ENST00000582955 PUM3Q15397 648 aaKnown RBP15.68■□□□□ 0.1
SMARCE1-218ENST00000582955 DACT2Q5SW24 774 aa15.68■□□□□ 0.1
SMARCE1-218ENST00000582955 ATG9AQ7Z3C6 839 aa15.68■□□□□ 0.1
SMARCE1-218ENST00000582955 SAMD7Q7Z3H4 446 aa15.68■□□□□ 0.1
SMARCE1-218ENST00000582955 CNTROBQ8N137 903 aa15.68■□□□□ 0.1
SMARCE1-218ENST00000582955 C1orf115Q9H7X2 142 aa15.68■□□□□ 0.1
SMARCE1-218ENST00000582955 FBXO3Q9UK99 471 aa15.68■□□□□ 0.1
SMARCE1-218ENST00000582955 ZNF609O15014 1411 aa15.68■□□□□ 0.1
SMARCE1-218ENST00000582955 MYO3BQ8WXR4 1341 aa15.68■□□□□ 0.1
SMARCE1-218ENST00000582955 ZBTB7BO15156 539 aaPredicted RBP15.67■□□□□ 0.1
SMARCE1-218ENST00000582955 IFIT1P09914 478 aaKnown RBP15.67■□□□□ 0.1
SMARCE1-218ENST00000582955 USP17L8P0C7I0 530 aa15.67■□□□□ 0.1
SMARCE1-218ENST00000582955 HIBADHP31937 336 aaKnown RBP15.67■□□□□ 0.1
SMARCE1-218ENST00000582955 HIRAP54198 1017 aaPredicted RBP15.67■□□□□ 0.1
SMARCE1-218ENST00000582955 KIF4BQ2VIQ3 1234 aa15.67■□□□□ 0.1
SMARCE1-218ENST00000582955 VPS37DQ86XT2 251 aa15.67■□□□□ 0.1
SMARCE1-218ENST00000582955 COPRSQ9NQ92 184 aa15.67■□□□□ 0.1
SMARCE1-218ENST00000582955 CEP126Q9P2H0 1117 aa15.67■□□□□ 0.1
SMARCE1-218ENST00000582955 EGFRP00533 1210 aa15.66■□□□□ 0.1
SMARCE1-218ENST00000582955 IL1R1P14778 569 aa15.66■□□□□ 0.1
SMARCE1-218ENST00000582955 IL15P40933 162 aaPredicted RBP15.66■□□□□ 0.1
SMARCE1-218ENST00000582955 HTRA3P83110 453 aa15.66■□□□□ 0.1
SMARCE1-218ENST00000582955 CAVIN4Q5BKX8 364 aa15.66■□□□□ 0.1
SMARCE1-218ENST00000582955 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.66■□□□□ 0.1
SMARCE1-218ENST00000582955 FAM84BQ96KN1 310 aaPredicted RBP15.66■□□□□ 0.1
SMARCE1-218ENST00000582955 GMLQ99445 158 aa15.66■□□□□ 0.1
SMARCE1-218ENST00000582955 JAG2Q9Y219 1238 aa15.66■□□□□ 0.1
SMARCE1-218ENST00000582955 PNMA6EA0A0J9YXQ4 647 aa15.65■□□□□ 0.1
SMARCE1-218ENST00000582955 ITGBL1O95965 494 aaPredicted RBP15.65■□□□□ 0.1
SMARCE1-218ENST00000582955 SLC5A1P13866 664 aa15.65■□□□□ 0.1
SMARCE1-218ENST00000582955 ZNF280AP59817 542 aaPredicted RBP15.65■□□□□ 0.1
SMARCE1-218ENST00000582955 OGFOD1Q8N543 542 aa15.65■□□□□ 0.1
SMARCE1-218ENST00000582955 ZC3H15Q8WU90 426 aaKnown RBP15.65■□□□□ 0.1
SMARCE1-218ENST00000582955 COG6Q9Y2V7 657 aa15.65■□□□□ 0.1
SMARCE1-218ENST00000582955 PASKQ96RG2 1323 aa15.65■□□□□ 0.1
SMARCE1-218ENST00000582955 ZNF646O15015 1829 aaPredicted RBP15.64■□□□□ 0.09
SMARCE1-218ENST00000582955 FRAT2O75474 233 aaPredicted RBP15.64■□□□□ 0.09
SMARCE1-218ENST00000582955 FGFR2P21802 821 aa15.64■□□□□ 0.09
SMARCE1-218ENST00000582955 MVPQ14764 893 aaKnown RBP15.64■□□□□ 0.09
SMARCE1-218ENST00000582955 ATP2B3Q16720 1220 aa15.64■□□□□ 0.09
SMARCE1-218ENST00000582955 KIAA0825Q8IV33 1275 aa15.64■□□□□ 0.09
SMARCE1-218ENST00000582955 TDRD7Q8NHU6 1098 aaKnown RBP15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms