RNA–Protein interactions for RNA: ENST00000582671.1

LIMS2-218, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 4

Gene LIMS2, Length 531 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-218ENST00000582671 PGAP2Q9UHJ9 254 aa23.58■■□□□ 1.37
LIMS2-218ENST00000582671 BCAR3O75815 825 aa23.57■■□□□ 1.36
LIMS2-218ENST00000582671 KCNJ4P48050 445 aa23.57■■□□□ 1.36
LIMS2-218ENST00000582671 RSBN1LQ6PCB5 846 aaPredicted RBP23.57■■□□□ 1.36
LIMS2-218ENST00000582671 COA1Q9GZY4 146 aa23.57■■□□□ 1.36
LIMS2-218ENST00000582671 CNNM1Q9NRU3 951 aa23.57■■□□□ 1.36
LIMS2-218ENST00000582671 USP17L3A6NCW0 530 aa23.56■■□□□ 1.36
LIMS2-218ENST00000582671 USP17L4A6NCW7 530 aa23.56■■□□□ 1.36
LIMS2-218ENST00000582671 TRAF5O00463 557 aa23.56■■□□□ 1.36
LIMS2-218ENST00000582671 TBC1D10BQ4KMP7 808 aaPredicted RBP23.56■■□□□ 1.36
LIMS2-218ENST00000582671 USP17L1Q7RTZ2 530 aa23.56■■□□□ 1.36
LIMS2-218ENST00000582671 ARHGAP45Q92619 1136 aa23.56■■□□□ 1.36
LIMS2-218ENST00000582671 KIF16BQ96L93 1317 aa23.56■■□□□ 1.36
LIMS2-218ENST00000582671 PLIN1O60240 522 aa23.55■■□□□ 1.36
LIMS2-218ENST00000582671 RBM26Q5T8P6 1007 aaKnown RBP23.55■■□□□ 1.36
LIMS2-218ENST00000582671 GMLQ99445 158 aa23.55■■□□□ 1.36
LIMS2-218ENST00000582671 MXD3Q9BW11 206 aa23.55■■□□□ 1.36
LIMS2-218ENST00000582671 TNNQ9UQP3 1299 aa23.55■■□□□ 1.36
LIMS2-218ENST00000582671 ZBED9Q6R2W3 1325 aa23.55■■□□□ 1.36
LIMS2-218ENST00000582671 TMEM88BA6NKF7 163 aa23.54■■□□□ 1.36
LIMS2-218ENST00000582671 DACT2Q5SW24 774 aa23.54■■□□□ 1.36
LIMS2-218ENST00000582671 C15orf52Q6ZUT6 534 aaKnown RBP23.54■■□□□ 1.36
LIMS2-218ENST00000582671 AGBL3Q8NEM8 1001 aa23.54■■□□□ 1.36
LIMS2-218ENST00000582671 ZC3H15Q8WU90 426 aaKnown RBP23.54■■□□□ 1.36
LIMS2-218ENST00000582671 JMYQ8N9B5 988 aa23.53■■□□□ 1.36
LIMS2-218ENST00000582671 KLHDC4Q8TBB5 520 aa23.53■■□□□ 1.36
LIMS2-218ENST00000582671 GLIS2Q9BZE0 524 aaPredicted RBP23.53■■□□□ 1.36
LIMS2-218ENST00000582671 RIPOR2Q9Y4F9 1068 aa23.53■■□□□ 1.36
LIMS2-218ENST00000582671 ZNF280AP59817 542 aaPredicted RBP23.52■■□□□ 1.36
LIMS2-218ENST00000582671 LRRC24Q50LG9 513 aa23.52■■□□□ 1.36
LIMS2-218ENST00000582671 CD209Q9NNX6 404 aa23.52■■□□□ 1.36
LIMS2-218ENST00000582671 MKRN1Q9UHC7 482 aaKnown RBP23.52■■□□□ 1.36
LIMS2-218ENST00000582671 TRIM27P14373 513 aa23.51■■□□□ 1.35
LIMS2-218ENST00000582671 RFX5P48382 616 aaPredicted RBP23.51■■□□□ 1.35
LIMS2-218ENST00000582671 KIF4BQ2VIQ3 1234 aa23.51■■□□□ 1.35
LIMS2-218ENST00000582671 STRIP1Q5VSL9 837 aa23.51■■□□□ 1.35
LIMS2-218ENST00000582671 INTS3Q68E01 1043 aaKnown RBP23.51■■□□□ 1.35
LIMS2-218ENST00000582671 FBXW7Q969H0 707 aa23.51■■□□□ 1.35
LIMS2-218ENST00000582671 USP17L8P0C7I0 530 aa23.5■■□□□ 1.35
LIMS2-218ENST00000582671 UBTFL1P0CB47 393 aaPredicted RBP23.5■■□□□ 1.35
LIMS2-218ENST00000582671 CST9Q5W186 159 aa23.5■■□□□ 1.35
LIMS2-218ENST00000582671 FRAT1Q92837 279 aaPredicted RBP23.5■■□□□ 1.35
LIMS2-218ENST00000582671 MEIS3Q99687 375 aa23.5■■□□□ 1.35
LIMS2-218ENST00000582671 ASTN2O75129 1339 aaPredicted RBP23.5■■□□□ 1.35
LIMS2-218ENST00000582671 GTF2IP78347 998 aa23.49■■□□□ 1.35
LIMS2-218ENST00000582671 TTLL5Q6EMB2 1281 aa23.49■■□□□ 1.35
LIMS2-218ENST00000582671 DLK2Q6UY11 383 aa23.49■■□□□ 1.35
LIMS2-218ENST00000582671 ATF7IPQ6VMQ6 1270 aa23.49■■□□□ 1.35
LIMS2-218ENST00000582671 CDC37L1Q7L3B6 337 aa23.48■■□□□ 1.35
LIMS2-218ENST00000582671 LRRFIP2Q9Y608 721 aaKnown RBP23.48■■□□□ 1.35
LIMS2-218ENST00000582671 MROH5Q6ZUA9 1318 aa23.48■■□□□ 1.35
LIMS2-218ENST00000582671 CNTNAP1P78357 1384 aa23.48■■□□□ 1.35
LIMS2-218ENST00000582671 IPO8O15397 1037 aaKnown RBP23.47■■□□□ 1.35
LIMS2-218ENST00000582671 IL1R1P14778 569 aa23.47■■□□□ 1.35
LIMS2-218ENST00000582671 UBE4AQ14139 1066 aa23.47■■□□□ 1.35
LIMS2-218ENST00000582671 USP48Q86UV5 1035 aa23.47■■□□□ 1.35
LIMS2-218ENST00000582671 VGLL2Q8N8G2 317 aa23.47■■□□□ 1.35
LIMS2-218ENST00000582671 MYOZ2Q9NPC6 264 aa23.47■■□□□ 1.35
LIMS2-218ENST00000582671 PTPN12Q05209 780 aaKnown RBP23.46■■□□□ 1.35
LIMS2-218ENST00000582671 ZNF804AQ7Z570 1209 aa23.46■■□□□ 1.35
LIMS2-218ENST00000582671 MYO3BQ8WXR4 1341 aa23.46■■□□□ 1.35
LIMS2-218ENST00000582671 CLUAP1Q96AJ1 413 aa23.46■■□□□ 1.35
LIMS2-218ENST00000582671 MYH13Q9UKX3 1938 aa23.45■■□□□ 1.35
LIMS2-218ENST00000582671 ECM29Q5VYK3 1845 aa23.45■■□□□ 1.34
LIMS2-218ENST00000582671 ARAP2Q8WZ64 1704 aa23.45■■□□□ 1.34
LIMS2-218ENST00000582671 GYG1P46976 350 aa23.45■■□□□ 1.34
LIMS2-218ENST00000582671 METTL24Q5JXM2 366 aa23.45■■□□□ 1.34
LIMS2-218ENST00000582671 CERS5Q8N5B7 392 aa23.45■■□□□ 1.34
LIMS2-218ENST00000582671 ABT1Q9ULW3 272 aaKnown RBP23.45■■□□□ 1.34
LIMS2-218ENST00000582671 RASSF10A6NK89 507 aa23.44■■□□□ 1.34
LIMS2-218ENST00000582671 ADM5C9JUS6 153 aa23.44■■□□□ 1.34
LIMS2-218ENST00000582671 PDE8BO95263 885 aa23.44■■□□□ 1.34
LIMS2-218ENST00000582671 SCARF1Q14162 830 aa23.44■■□□□ 1.34
LIMS2-218ENST00000582671 ZKSCAN2Q63HK3 967 aa23.44■■□□□ 1.34
LIMS2-218ENST00000582671 FAM84BQ96KN1 310 aaPredicted RBP23.44■■□□□ 1.34
LIMS2-218ENST00000582671 GGA3Q9NZ52 723 aa23.44■■□□□ 1.34
LIMS2-218ENST00000582671 EYA2O00167 538 aa23.43■■□□□ 1.34
LIMS2-218ENST00000582671 CELF2O95319 508 aaKnown RBP23.43■■□□□ 1.34
LIMS2-218ENST00000582671 KRT26Q7Z3Y9 468 aa23.43■■□□□ 1.34
LIMS2-218ENST00000582671 KIAA0825Q8IV33 1275 aa23.43■■□□□ 1.34
LIMS2-218ENST00000582671 DCPSQ96C86 337 aaKnown RBP23.43■■□□□ 1.34
LIMS2-218ENST00000582671 JAG2Q9Y219 1238 aa23.43■■□□□ 1.34
LIMS2-218ENST00000582671 VEGFBP49765 207 aa23.42■■□□□ 1.34
LIMS2-218ENST00000582671 DEFB115Q30KQ5 88 aa23.42■■□□□ 1.34
LIMS2-218ENST00000582671 ANGEL2Q5VTE6 544 aaKnown RBP23.42■■□□□ 1.34
LIMS2-218ENST00000582671 ATG9AQ7Z3C6 839 aa23.42■■□□□ 1.34
LIMS2-218ENST00000582671 TDRD7Q8NHU6 1098 aaKnown RBP23.42■■□□□ 1.34
LIMS2-218ENST00000582671 ZNF408Q9H9D4 720 aa23.42■■□□□ 1.34
LIMS2-218ENST00000582671 HIBADHP31937 336 aaKnown RBP23.41■■□□□ 1.34
LIMS2-218ENST00000582671 NBPF9Q3BBW0 867 aa23.41■■□□□ 1.34
LIMS2-218ENST00000582671 TMEM57Q8N5G2 664 aa23.41■■□□□ 1.34
LIMS2-218ENST00000582671 TLL2Q9Y6L7 1015 aa23.41■■□□□ 1.34
LIMS2-218ENST00000582671 SASH1O94885 1247 aa23.4■■□□□ 1.34
LIMS2-218ENST00000582671 GNAI3P08754 354 aa23.4■■□□□ 1.34
LIMS2-218ENST00000582671 OGFOD1Q8N543 542 aa23.4■■□□□ 1.34
LIMS2-218ENST00000582671 HDAC5Q9UQL6 1122 aa23.4■■□□□ 1.34
LIMS2-218ENST00000582671 FGFR2P21802 821 aa23.39■■□□□ 1.33
LIMS2-218ENST00000582671 FBXO33Q7Z6M2 555 aa23.39■■□□□ 1.33
LIMS2-218ENST00000582671 SIL1Q9H173 461 aa23.39■■□□□ 1.33
LIMS2-218ENST00000582671 SCAF8Q9UPN6 1271 aaKnown RBP23.39■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms