RNA–Protein interactions for RNA: ENST00000582629.1

ITGB4-208, Transcript of integrin subunit beta 4, humanhuman

TSL 3

Gene ITGB4, Length 458 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-208ENST00000582629 GCKRQ14397 625 aa18.49■□□□□ 0.55
ITGB4-208ENST00000582629 ANGEL2Q5VTE6 544 aaKnown RBP18.49■□□□□ 0.55
ITGB4-208ENST00000582629 DNAAF4Q8WXU2 420 aa18.49■□□□□ 0.55
ITGB4-208ENST00000582629 CCDC102AQ96A19 550 aa18.49■□□□□ 0.55
ITGB4-208ENST00000582629 CDCA5Q96FF9 252 aa18.49■□□□□ 0.55
ITGB4-208ENST00000582629 ZIC5Q96T25 663 aa18.49■□□□□ 0.55
ITGB4-208ENST00000582629 MYH16Q9H6N6 1097 aa18.49■□□□□ 0.55
ITGB4-208ENST00000582629 MYOZ2Q9NPC6 264 aa18.49■□□□□ 0.55
ITGB4-208ENST00000582629 LEMD3Q9Y2U8 911 aa18.48■□□□□ 0.55
ITGB4-208ENST00000582629 PITPNM2Q9BZ72 1349 aa18.48■□□□□ 0.55
ITGB4-208ENST00000582629 WTIPA6NIX2 430 aaPredicted RBP18.47■□□□□ 0.55
ITGB4-208ENST00000582629 ITGA6P23229 1130 aa18.47■□□□□ 0.55
ITGB4-208ENST00000582629 ZNF157P51786 506 aaPredicted RBP18.47■□□□□ 0.55
ITGB4-208ENST00000582629 CASP7P55210 303 aa18.47■□□□□ 0.55
ITGB4-208ENST00000582629 WDR63Q8IWG1 891 aa18.47■□□□□ 0.55
ITGB4-208ENST00000582629 LINS1Q8NG48 757 aa18.47■□□□□ 0.55
ITGB4-208ENST00000582629 COA1Q9GZY4 146 aa18.47■□□□□ 0.55
ITGB4-208ENST00000582629 AKAP11Q9UKA4 1901 aa18.47■□□□□ 0.55
ITGB4-208ENST00000582629 MYO3BQ8WXR4 1341 aa18.47■□□□□ 0.55
ITGB4-208ENST00000582629 PAPPA2Q9BXP8 1791 aa18.46■□□□□ 0.55
ITGB4-208ENST00000582629 ANP32CO43423 234 aa18.46■□□□□ 0.55
ITGB4-208ENST00000582629 FAM161AQ3B820 660 aa18.46■□□□□ 0.55
ITGB4-208ENST00000582629 MPHOSPH8Q99549 860 aa18.46■□□□□ 0.55
ITGB4-208ENST00000582629 ANKRD2Q9GZV1 360 aa18.46■□□□□ 0.55
ITGB4-208ENST00000582629 VAMP4O75379 141 aa18.45■□□□□ 0.54
ITGB4-208ENST00000582629 CSF1RP07333 972 aa18.45■□□□□ 0.54
ITGB4-208ENST00000582629 SLC10A3P09131 477 aa18.45■□□□□ 0.54
ITGB4-208ENST00000582629 FKBP1BP68106 108 aa18.45■□□□□ 0.54
ITGB4-208ENST00000582629 KIF23Q02241 960 aaPredicted RBP18.45■□□□□ 0.54
ITGB4-208ENST00000582629 DACT2Q5SW24 774 aa18.45■□□□□ 0.54
ITGB4-208ENST00000582629 STRIP1Q5VSL9 837 aa18.45■□□□□ 0.54
ITGB4-208ENST00000582629 ZNF804BA4D1E1 1349 aa18.45■□□□□ 0.54
ITGB4-208ENST00000582629 ZEB1P37275 1124 aaPredicted RBP18.44■□□□□ 0.54
ITGB4-208ENST00000582629 EXOSC9Q06265 439 aaKnown RBP18.44■□□□□ 0.54
ITGB4-208ENST00000582629 OGFOD1Q8N543 542 aa18.44■□□□□ 0.54
ITGB4-208ENST00000582629 FBXW7Q969H0 707 aa18.44■□□□□ 0.54
ITGB4-208ENST00000582629 SAGE1Q9NXZ1 904 aa18.44■□□□□ 0.54
ITGB4-208ENST00000582629 SALL2Q9Y467 1007 aaPredicted RBP18.44■□□□□ 0.54
ITGB4-208ENST00000582629 CCDC85CA6NKD9 419 aa18.43■□□□□ 0.54
ITGB4-208ENST00000582629 MMP14P50281 582 aa18.43■□□□□ 0.54
ITGB4-208ENST00000582629 TXNRD3Q86VQ6 643 aa18.43■□□□□ 0.54
ITGB4-208ENST00000582629 MXD3Q9BW11 206 aa18.43■□□□□ 0.54
ITGB4-208ENST00000582629 ANKRD18BA2A2Z9 1011 aa18.42■□□□□ 0.54
ITGB4-208ENST00000582629 KCNJ4P48050 445 aa18.42■□□□□ 0.54
ITGB4-208ENST00000582629 NBPF9Q3BBW0 867 aa18.42■□□□□ 0.54
ITGB4-208ENST00000582629 MCOLN1Q9GZU1 580 aa18.42■□□□□ 0.54
ITGB4-208ENST00000582629 A0A1B0GUL6 1792 aa18.42■□□□□ 0.54
ITGB4-208ENST00000582629 KLRK1P26718 216 aa18.41■□□□□ 0.54
ITGB4-208ENST00000582629 CHRNDQ07001 517 aa18.41■□□□□ 0.54
ITGB4-208ENST00000582629 TTLL5Q6EMB2 1281 aa18.41■□□□□ 0.54
ITGB4-208ENST00000582629 RASAL3Q86YV0 1011 aa18.41■□□□□ 0.54
ITGB4-208ENST00000582629 REM2Q8IYK8 340 aaPredicted RBP18.41■□□□□ 0.54
ITGB4-208ENST00000582629 WNT10BO00744 389 aa18.4■□□□□ 0.54
ITGB4-208ENST00000582629 DGKZQ13574 1117 aa18.4■□□□□ 0.54
ITGB4-208ENST00000582629 RNF186Q9NXI6 227 aa18.4■□□□□ 0.54
ITGB4-208ENST00000582629 HDAC9Q9UKV0 1011 aa18.4■□□□□ 0.54
ITGB4-208ENST00000582629 ZNF316A6NFI3 1004 aaPredicted RBP18.39■□□□□ 0.53
ITGB4-208ENST00000582629 F6X3S4 739 aa18.39■□□□□ 0.53
ITGB4-208ENST00000582629 IFIT5Q13325 482 aaKnown RBP18.39■□□□□ 0.53
ITGB4-208ENST00000582629 BEND3Q5T5X7 828 aa18.39■□□□□ 0.53
ITGB4-208ENST00000582629 CSRNP1Q96S65 589 aa18.39■□□□□ 0.53
ITGB4-208ENST00000582629 SCAF8Q9UPN6 1271 aaKnown RBP18.39■□□□□ 0.53
ITGB4-208ENST00000582629 SASH1O94885 1247 aa18.38■□□□□ 0.53
ITGB4-208ENST00000582629 GTF2IP78347 998 aa18.38■□□□□ 0.53
ITGB4-208ENST00000582629 FOXO4P98177 505 aa18.38■□□□□ 0.53
ITGB4-208ENST00000582629 KIAA0825Q8IV33 1275 aa18.38■□□□□ 0.53
ITGB4-208ENST00000582629 CD209Q9NNX6 404 aa18.38■□□□□ 0.53
ITGB4-208ENST00000582629 CHMP3Q9Y3E7 222 aa18.38■□□□□ 0.53
ITGB4-208ENST00000582629 TRPA1O75762 1119 aa18.37■□□□□ 0.53
ITGB4-208ENST00000582629 NF2P35240 595 aa18.37■□□□□ 0.53
ITGB4-208ENST00000582629 C15orf52Q6ZUT6 534 aaKnown RBP18.37■□□□□ 0.53
ITGB4-208ENST00000582629 SPINK5Q9NQ38 1064 aaPredicted RBP18.37■□□□□ 0.53
ITGB4-208ENST00000582629 TAF5LO75529 589 aa18.36■□□□□ 0.53
ITGB4-208ENST00000582629 TTLL12Q14166 644 aaPredicted RBP18.36■□□□□ 0.53
ITGB4-208ENST00000582629 PRAMEF18Q5VWM3 479 aa18.36■□□□□ 0.53
ITGB4-208ENST00000582629 MOB2Q70IA6 237 aa18.36■□□□□ 0.53
ITGB4-208ENST00000582629 APOBEC3FQ8IUX4 373 aaKnown RBP18.36■□□□□ 0.53
ITGB4-208ENST00000582629 IRS2Q9Y4H2 1338 aa18.36■□□□□ 0.53
ITGB4-208ENST00000582629 ECM29Q5VYK3 1845 aa18.35■□□□□ 0.53
ITGB4-208ENST00000582629 UBE2Q2LH0YL09 131 aa18.35■□□□□ 0.53
ITGB4-208ENST00000582629 GRM8O00222 908 aa18.35■□□□□ 0.53
ITGB4-208ENST00000582629 RGS19P49795 217 aa18.35■□□□□ 0.53
ITGB4-208ENST00000582629 LMBR1LQ6UX01 489 aa18.35■□□□□ 0.53
ITGB4-208ENST00000582629 ZBED3Q96IU2 234 aaPredicted RBP18.35■□□□□ 0.53
ITGB4-208ENST00000582629 CCDC57Q2TAC2 916 aa18.34■□□□□ 0.53
ITGB4-208ENST00000582629 ZNF804AQ7Z570 1209 aa18.34■□□□□ 0.53
ITGB4-208ENST00000582629 HELBQ8NG08 1087 aaPredicted RBP18.34■□□□□ 0.53
ITGB4-208ENST00000582629 COL1A1P02452 1464 aaPredicted RBP18.33■□□□□ 0.53
ITGB4-208ENST00000582629 SNAP23O00161 211 aa18.33■□□□□ 0.52
ITGB4-208ENST00000582629 ALDH1L1O75891 902 aa18.33■□□□□ 0.52
ITGB4-208ENST00000582629 IL1R1P14778 569 aa18.33■□□□□ 0.52
ITGB4-208ENST00000582629 MLLT1Q03111 559 aaPredicted RBP18.33■□□□□ 0.52
ITGB4-208ENST00000582629 TAF7LQ5H9L4 462 aa18.33■□□□□ 0.52
ITGB4-208ENST00000582629 EPHA10Q5JZY3 1008 aa18.33■□□□□ 0.52
ITGB4-208ENST00000582629 FAM9BQ8IZU0 186 aa18.33■□□□□ 0.52
ITGB4-208ENST00000582629 C9orf78Q9NZ63 289 aaPredicted RBP18.33■□□□□ 0.52
ITGB4-208ENST00000582629 DLGAP5Q15398 846 aa18.32■□□□□ 0.52
ITGB4-208ENST00000582629 LDHAL6AQ6ZMR3 332 aa18.32■□□□□ 0.52
ITGB4-208ENST00000582629 ARMC9Q7Z3E5 817 aa18.32■□□□□ 0.52
ITGB4-208ENST00000582629 MTMR14Q8NCE2 650 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms