RNA–Protein interactions for RNA: ENST00000582370.1

PDLIM1P3-201, Transcript of PDZ and LIM domain 1 pseudogene 3, humanhuman

BASIC

Gene PDLIM1P3, Length 599 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P3-201ENST00000582370 MIS18AQ9NYP9 233 aa11.14□□□□□ -0.63
PDLIM1P3-201ENST00000582370 POLLQ9UGP5 575 aa11.14□□□□□ -0.63
PDLIM1P3-201ENST00000582370 PTPN22Q9Y2R2 807 aa11.14□□□□□ -0.63
PDLIM1P3-201ENST00000582370 FANCIQ9NVI1 1328 aa11.13□□□□□ -0.63
PDLIM1P3-201ENST00000582370 INHBEP58166 350 aa11.13□□□□□ -0.63
PDLIM1P3-201ENST00000582370 MKRN3Q13064 507 aaKnown RBP11.13□□□□□ -0.63
PDLIM1P3-201ENST00000582370 LRP10Q7Z4F1 713 aa11.13□□□□□ -0.63
PDLIM1P3-201ENST00000582370 TBC1D16Q8TBP0 767 aa11.13□□□□□ -0.63
PDLIM1P3-201ENST00000582370 ZC3H12CQ9C0D7 883 aaKnown RBP11.13□□□□□ -0.63
PDLIM1P3-201ENST00000582370 MBIPQ9NS73 344 aa11.13□□□□□ -0.63
PDLIM1P3-201ENST00000582370 TRMT112Q9UI30 125 aaKnown RBP11.13□□□□□ -0.63
PDLIM1P3-201ENST00000582370 LAS1LQ9Y4W2 734 aaKnown RBP11.13□□□□□ -0.63
PDLIM1P3-201ENST00000582370 A0A0C4DFX4 3053 aa11.13□□□□□ -0.63
PDLIM1P3-201ENST00000582370 MANSC4A6NHS7 340 aaPredicted RBP11.12□□□□□ -0.63
PDLIM1P3-201ENST00000582370 G3V3G9 751 aa11.12□□□□□ -0.63
PDLIM1P3-201ENST00000582370 USP17L8P0C7I0 530 aa11.12□□□□□ -0.63
PDLIM1P3-201ENST00000582370 GPSM2P81274 684 aa11.12□□□□□ -0.63
PDLIM1P3-201ENST00000582370 ALDH1L2Q3SY69 923 aa11.12□□□□□ -0.63
PDLIM1P3-201ENST00000582370 DCAF8Q5TAQ9 597 aa11.12□□□□□ -0.63
PDLIM1P3-201ENST00000582370 CELF1Q92879 486 aaKnown RBP11.12□□□□□ -0.63
PDLIM1P3-201ENST00000582370 H0YGN5 161 aa11.11□□□□□ -0.63
PDLIM1P3-201ENST00000582370 SPRYD7Q5W111 196 aa11.11□□□□□ -0.63
PDLIM1P3-201ENST00000582370 ARMC9Q7Z3E5 817 aa11.11□□□□□ -0.63
PDLIM1P3-201ENST00000582370 IFNL1Q8IU54 200 aa11.11□□□□□ -0.63
PDLIM1P3-201ENST00000582370 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.11□□□□□ -0.63
PDLIM1P3-201ENST00000582370 ZNF333Q96JL9 665 aa11.11□□□□□ -0.63
PDLIM1P3-201ENST00000582370 GMLQ99445 158 aa11.11□□□□□ -0.63
PDLIM1P3-201ENST00000582370 EFCC1Q9HA90 598 aa11.11□□□□□ -0.63
PDLIM1P3-201ENST00000582370 PODXL2Q9NZ53 605 aa11.11□□□□□ -0.63
PDLIM1P3-201ENST00000582370 COL1A1P02452 1464 aaPredicted RBP11.11□□□□□ -0.63
PDLIM1P3-201ENST00000582370 LAMA3Q16787 3333 aa11.1□□□□□ -0.63
PDLIM1P3-201ENST00000582370 ZBTB48P10074 688 aaPredicted RBP11.1□□□□□ -0.63
PDLIM1P3-201ENST00000582370 MS4A1P11836 297 aa11.1□□□□□ -0.63
PDLIM1P3-201ENST00000582370 MNX1P50219 401 aaPredicted RBP11.1□□□□□ -0.63
PDLIM1P3-201ENST00000582370 PTPN12Q05209 780 aaKnown RBP11.1□□□□□ -0.63
PDLIM1P3-201ENST00000582370 SF3B3Q15393 1217 aaKnown RBP11.1□□□□□ -0.63
PDLIM1P3-201ENST00000582370 TWISTNBQ3B726 338 aaPredicted RBP11.1□□□□□ -0.63
PDLIM1P3-201ENST00000582370 CCDC30Q5VVM6 783 aa11.1□□□□□ -0.63
PDLIM1P3-201ENST00000582370 CHRDL2Q6WN34 429 aa11.1□□□□□ -0.63
PDLIM1P3-201ENST00000582370 CD99L2Q8TCZ2 262 aa11.1□□□□□ -0.63
PDLIM1P3-201ENST00000582370 THUMPD2Q9BTF0 503 aaKnown RBP11.1□□□□□ -0.63
PDLIM1P3-201ENST00000582370 OTOFQ9HC10 1997 aa11.1□□□□□ -0.63
PDLIM1P3-201ENST00000582370 PDIA6Q15084 440 aa11.09□□□□□ -0.63
PDLIM1P3-201ENST00000582370 LDLRAD1Q5T700 205 aa11.09□□□□□ -0.63
PDLIM1P3-201ENST00000582370 PRAMEF18Q5VWM3 479 aa11.09□□□□□ -0.63
PDLIM1P3-201ENST00000582370 NBPF11Q86T75 865 aa11.09□□□□□ -0.63
PDLIM1P3-201ENST00000582370 CDCA7LQ96GN5 454 aa11.09□□□□□ -0.63
PDLIM1P3-201ENST00000582370 STK31Q9BXU1 1019 aa11.09□□□□□ -0.63
PDLIM1P3-201ENST00000582370 SCAF8Q9UPN6 1271 aaKnown RBP11.09□□□□□ -0.63
PDLIM1P3-201ENST00000582370 SPEF2Q9C093 1822 aa11.09□□□□□ -0.63
PDLIM1P3-201ENST00000582370 IGF2BP3O00425 579 aaKnown RBP eCLIP11.08□□□□□ -0.64
PDLIM1P3-201ENST00000582370 IPO8O15397 1037 aaKnown RBP11.08□□□□□ -0.64
PDLIM1P3-201ENST00000582370 UFL1O94874 794 aa11.08□□□□□ -0.64
PDLIM1P3-201ENST00000582370 EXOSC9Q06265 439 aaKnown RBP11.08□□□□□ -0.64
PDLIM1P3-201ENST00000582370 NBPF9Q3BBW0 867 aa11.08□□□□□ -0.64
PDLIM1P3-201ENST00000582370 RBM27Q9P2N5 1060 aaKnown RBP11.08□□□□□ -0.64
PDLIM1P3-201ENST00000582370 GGA1Q9UJY5 639 aa11.08□□□□□ -0.64
PDLIM1P3-201ENST00000582370 RCAN3Q9UKA8 241 aa11.08□□□□□ -0.64
PDLIM1P3-201ENST00000582370 KIF16BQ96L93 1317 aa11.08□□□□□ -0.64
PDLIM1P3-201ENST00000582370 USP17L3A6NCW0 530 aa11.07□□□□□ -0.64
PDLIM1P3-201ENST00000582370 USP17L4A6NCW7 530 aa11.07□□□□□ -0.64
PDLIM1P3-201ENST00000582370 WNT10BO00744 389 aa11.07□□□□□ -0.64
PDLIM1P3-201ENST00000582370 MMP14P50281 582 aa11.07□□□□□ -0.64
PDLIM1P3-201ENST00000582370 RPS8P62241 208 aaKnown RBP11.07□□□□□ -0.64
PDLIM1P3-201ENST00000582370 SP3Q02447 781 aa11.07□□□□□ -0.64
PDLIM1P3-201ENST00000582370 SLC4A8Q2Y0W8 1093 aa11.07□□□□□ -0.64
PDLIM1P3-201ENST00000582370 SLC9C1Q4G0N8 1177 aa11.07□□□□□ -0.64
PDLIM1P3-201ENST00000582370 OTUD7BQ6GQQ9 843 aa11.07□□□□□ -0.64
PDLIM1P3-201ENST00000582370 USP17L1Q7RTZ2 530 aa11.07□□□□□ -0.64
PDLIM1P3-201ENST00000582370 PODNQ7Z5L7 613 aa11.07□□□□□ -0.64
PDLIM1P3-201ENST00000582370 APOBEC3FQ8IUX4 373 aaKnown RBP11.07□□□□□ -0.64
PDLIM1P3-201ENST00000582370 TSR2Q969E8 191 aaKnown RBP11.07□□□□□ -0.64
PDLIM1P3-201ENST00000582370 DBF4Q9UBU7 674 aaPredicted RBP11.07□□□□□ -0.64
PDLIM1P3-201ENST00000582370 ANGEL1Q9UNK9 670 aaKnown RBP11.07□□□□□ -0.64
PDLIM1P3-201ENST00000582370 MYH3P11055 1940 aa11.07□□□□□ -0.64
PDLIM1P3-201ENST00000582370 MYO3BQ8WXR4 1341 aa11.07□□□□□ -0.64
PDLIM1P3-201ENST00000582370 UNC80Q8N2C7 3258 aa11.06□□□□□ -0.64
PDLIM1P3-201ENST00000582370 UNCXA6NJT0 531 aa11.06□□□□□ -0.64
PDLIM1P3-201ENST00000582370 VAMP4O75379 141 aa11.06□□□□□ -0.64
PDLIM1P3-201ENST00000582370 CRHR2Q13324 411 aa11.06□□□□□ -0.64
PDLIM1P3-201ENST00000582370 ARHGEF6Q15052 776 aa11.06□□□□□ -0.64
PDLIM1P3-201ENST00000582370 MAP3K11Q16584 847 aa11.06□□□□□ -0.64
PDLIM1P3-201ENST00000582370 PROSER3Q2NL68 480 aa11.06□□□□□ -0.64
PDLIM1P3-201ENST00000582370 COPS6Q7L5N1 327 aa11.06□□□□□ -0.64
PDLIM1P3-201ENST00000582370 OGFOD1Q8N543 542 aa11.06□□□□□ -0.64
PDLIM1P3-201ENST00000582370 WNK4Q96J92 1243 aa11.06□□□□□ -0.64
PDLIM1P3-201ENST00000582370 SPINK5Q9NQ38 1064 aaPredicted RBP11.06□□□□□ -0.64
PDLIM1P3-201ENST00000582370 ANKIB1Q9P2G1 1089 aa11.06□□□□□ -0.64
PDLIM1P3-201ENST00000582370 ZSWIM8A7E2V4 1837 aa11.05□□□□□ -0.64
PDLIM1P3-201ENST00000582370 A0A1W2PPC1 479 aa11.05□□□□□ -0.64
PDLIM1P3-201ENST00000582370 ANXA1P04083 346 aa11.05□□□□□ -0.64
PDLIM1P3-201ENST00000582370 EIF2S2P20042 333 aaKnown RBP11.05□□□□□ -0.64
PDLIM1P3-201ENST00000582370 PRKG1Q13976 671 aa11.05□□□□□ -0.64
PDLIM1P3-201ENST00000582370 XAGE3Q8WTP9 111 aa11.05□□□□□ -0.64
PDLIM1P3-201ENST00000582370 ARHGAP45Q92619 1136 aa11.05□□□□□ -0.64
PDLIM1P3-201ENST00000582370 SLC10A4Q96EP9 437 aa11.05□□□□□ -0.64
PDLIM1P3-201ENST00000582370 PRO3102Q9H379 93 aa11.05□□□□□ -0.64
PDLIM1P3-201ENST00000582370 HYPKQ9NX55 129 aa11.05□□□□□ -0.64
PDLIM1P3-201ENST00000582370 PTPRCP08575 1304 aa11.05□□□□□ -0.64
PDLIM1P3-201ENST00000582370 SSC5DA1L4H1 1573 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms