RNA–Protein interactions for RNA: ENST00000582293.1

RNF43-206, Transcript of ring finger protein 43, humanhuman

TSL 2

Gene RNF43, Length 324 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-206ENST00000582293 IL15P40933 162 aaPredicted RBP20.41■□□□□ 0.86
RNF43-206ENST00000582293 KCNJ4P48050 445 aa20.41■□□□□ 0.86
RNF43-206ENST00000582293 EIF6P56537 245 aaKnown RBP20.41■□□□□ 0.86
RNF43-206ENST00000582293 DPY19L2Q6NUT2 758 aa20.4■□□□□ 0.86
RNF43-206ENST00000582293 GPC2Q8N158 579 aa20.4■□□□□ 0.86
RNF43-206ENST00000582293 L3MBTL3Q96JM7 780 aaPredicted RBP20.4■□□□□ 0.86
RNF43-206ENST00000582293 NOP58Q9Y2X3 529 aaKnown RBP20.4■□□□□ 0.86
RNF43-206ENST00000582293 KDM2BQ8NHM5 1336 aa20.39■□□□□ 0.85
RNF43-206ENST00000582293 KIF3CO14782 793 aa20.39■□□□□ 0.85
RNF43-206ENST00000582293 SASH1O94885 1247 aa20.39■□□□□ 0.85
RNF43-206ENST00000582293 RPAP2Q8IXW5 612 aaPredicted RBP20.39■□□□□ 0.85
RNF43-206ENST00000582293 COA1Q9GZY4 146 aa20.39■□□□□ 0.85
RNF43-206ENST00000582293 GPBP1L1Q9HC44 474 aaPredicted RBP20.39■□□□□ 0.85
RNF43-206ENST00000582293 PSMD14O00487 310 aa20.38■□□□□ 0.85
RNF43-206ENST00000582293 TFCP2Q12800 502 aa20.38■□□□□ 0.85
RNF43-206ENST00000582293 PUM3Q15397 648 aaKnown RBP20.38■□□□□ 0.85
RNF43-206ENST00000582293 CIAPIN1Q6FI81 312 aa20.38■□□□□ 0.85
RNF43-206ENST00000582293 PODNQ7Z5L7 613 aa20.38■□□□□ 0.85
RNF43-206ENST00000582293 FAM84BQ96KN1 310 aaPredicted RBP20.38■□□□□ 0.85
RNF43-206ENST00000582293 CHMP4BQ9H444 224 aaKnown RBP20.38■□□□□ 0.85
RNF43-206ENST00000582293 RRAGCQ9HB90 399 aa20.38■□□□□ 0.85
RNF43-206ENST00000582293 CD209Q9NNX6 404 aa20.38■□□□□ 0.85
RNF43-206ENST00000582293 GJA3Q9Y6H8 435 aa20.38■□□□□ 0.85
RNF43-206ENST00000582293 ARAP2Q8WZ64 1704 aa20.38■□□□□ 0.85
RNF43-206ENST00000582293 GYG1P46976 350 aa20.37■□□□□ 0.85
RNF43-206ENST00000582293 SCNN1DP51172 638 aa20.37■□□□□ 0.85
RNF43-206ENST00000582293 CEP126Q9P2H0 1117 aa20.37■□□□□ 0.85
RNF43-206ENST00000582293 SURF6O75683 361 aaKnown RBP20.36■□□□□ 0.85
RNF43-206ENST00000582293 IL1R1P14778 569 aa20.36■□□□□ 0.85
RNF43-206ENST00000582293 FBXO33Q7Z6M2 555 aa20.36■□□□□ 0.85
RNF43-206ENST00000582293 ZBTB12Q9Y330 459 aaPredicted RBP20.36■□□□□ 0.85
RNF43-206ENST00000582293 PCDHB15Q9Y5E8 787 aa20.36■□□□□ 0.85
RNF43-206ENST00000582293 SCN4AP35499 1836 aa20.35■□□□□ 0.85
RNF43-206ENST00000582293 VIL1P09327 827 aaKnown RBP20.35■□□□□ 0.85
RNF43-206ENST00000582293 ATP2B3Q16720 1220 aa20.35■□□□□ 0.85
RNF43-206ENST00000582293 LPIN2Q92539 896 aa20.35■□□□□ 0.85
RNF43-206ENST00000582293 SHTN1A0MZ66 631 aa20.34■□□□□ 0.85
RNF43-206ENST00000582293 G3V3G9 751 aa20.34■□□□□ 0.85
RNF43-206ENST00000582293 GMPSP49915 693 aaPredicted RBP20.34■□□□□ 0.85
RNF43-206ENST00000582293 G3BP1Q13283 466 aaKnown RBP eCLIP20.34■□□□□ 0.85
RNF43-206ENST00000582293 TNIP1Q15025 636 aa20.34■□□□□ 0.85
RNF43-206ENST00000582293 DACT2Q5SW24 774 aa20.34■□□□□ 0.85
RNF43-206ENST00000582293 DCAF8Q5TAQ9 597 aa20.34■□□□□ 0.85
RNF43-206ENST00000582293 MXD3Q9BW11 206 aa20.34■□□□□ 0.85
RNF43-206ENST00000582293 EXOC6BQ9Y2D4 811 aa20.34■□□□□ 0.85
RNF43-206ENST00000582293 ZNF609O15014 1411 aa20.34■□□□□ 0.85
RNF43-206ENST00000582293 ADORA1P30542 326 aa20.33■□□□□ 0.85
RNF43-206ENST00000582293 BCAMP50895 628 aa20.33■□□□□ 0.85
RNF43-206ENST00000582293 TIMM10P62072 90 aa20.33■□□□□ 0.85
RNF43-206ENST00000582293 ZNF804AQ7Z570 1209 aa20.33■□□□□ 0.85
RNF43-206ENST00000582293 TDRD7Q8NHU6 1098 aaKnown RBP20.33■□□□□ 0.85
RNF43-206ENST00000582293 GMLQ99445 158 aa20.33■□□□□ 0.85
RNF43-206ENST00000582293 USP17L3A6NCW0 530 aa20.32■□□□□ 0.84
RNF43-206ENST00000582293 USP17L4A6NCW7 530 aa20.32■□□□□ 0.84
RNF43-206ENST00000582293 SLC5A1P13866 664 aa20.32■□□□□ 0.84
RNF43-206ENST00000582293 VEGFAP15692 232 aaPredicted RBP20.32■□□□□ 0.84
RNF43-206ENST00000582293 HIBADHP31937 336 aaKnown RBP20.32■□□□□ 0.84
RNF43-206ENST00000582293 EPS15P42566 896 aa20.32■□□□□ 0.84
RNF43-206ENST00000582293 USP17L1Q7RTZ2 530 aa20.32■□□□□ 0.84
RNF43-206ENST00000582293 EXOC6Q8TAG9 804 aa20.32■□□□□ 0.84
RNF43-206ENST00000582293 ADAMTSL1Q8N6G6 1762 aa20.31■□□□□ 0.84
RNF43-206ENST00000582293 COL1A1P02452 1464 aaPredicted RBP20.31■□□□□ 0.84
RNF43-206ENST00000582293 A0A1B0GUL7 405 aa20.31■□□□□ 0.84
RNF43-206ENST00000582293 IFIT1P09914 478 aaKnown RBP20.31■□□□□ 0.84
RNF43-206ENST00000582293 RSBN1LQ6PCB5 846 aaPredicted RBP20.31■□□□□ 0.84
RNF43-206ENST00000582293 TAF1DQ9H5J8 278 aaPredicted RBP20.31■□□□□ 0.84
RNF43-206ENST00000582293 GPRC5DQ9NZD1 345 aa20.31■□□□□ 0.84
RNF43-206ENST00000582293 GTF2IP78347 998 aa20.3■□□□□ 0.84
RNF43-206ENST00000582293 STRIP1Q5VSL9 837 aa20.3■□□□□ 0.84
RNF43-206ENST00000582293 CERS5Q8N5B7 392 aa20.3■□□□□ 0.84
RNF43-206ENST00000582293 JAG2Q9Y219 1238 aa20.3■□□□□ 0.84
RNF43-206ENST00000582293 HMMRO75330 724 aa20.29■□□□□ 0.84
RNF43-206ENST00000582293 POTEIP0CG38 1075 aa20.29■□□□□ 0.84
RNF43-206ENST00000582293 POTEJP0CG39 1038 aa20.29■□□□□ 0.84
RNF43-206ENST00000582293 PHKA1P46020 1223 aa20.29■□□□□ 0.84
RNF43-206ENST00000582293 IRX6P78412 446 aaPredicted RBP20.29■□□□□ 0.84
RNF43-206ENST00000582293 TTLL5Q6EMB2 1281 aa20.29■□□□□ 0.84
RNF43-206ENST00000582293 DPF2Q92785 391 aa20.29■□□□□ 0.84
RNF43-206ENST00000582293 XAGE2Q96GT9 111 aa20.29■□□□□ 0.84
RNF43-206ENST00000582293 GPR108Q9NPR9 543 aa20.29■□□□□ 0.84
RNF43-206ENST00000582293 HACL1Q9UJ83 578 aa20.29■□□□□ 0.84
RNF43-206ENST00000582293 IQSEC3Q9UPP2 1182 aaPredicted RBP20.29■□□□□ 0.84
RNF43-206ENST00000582293 FAM205AQ6ZU69 1335 aa20.28■□□□□ 0.84
RNF43-206ENST00000582293 EPHX2P34913 555 aa20.28■□□□□ 0.84
RNF43-206ENST00000582293 TNNI3KQ59H18 835 aa20.28■□□□□ 0.84
RNF43-206ENST00000582293 CAVIN4Q5BKX8 364 aa20.28■□□□□ 0.84
RNF43-206ENST00000582293 AKAP2Q9Y2D5 859 aa20.28■□□□□ 0.84
RNF43-206ENST00000582293 FPGT-TNNI3KV9GXZ4 949 aa20.28■□□□□ 0.84
RNF43-206ENST00000582293 IQCA1LA6NCM1 817 aa20.27■□□□□ 0.84
RNF43-206ENST00000582293 EGFRP00533 1210 aa20.27■□□□□ 0.84
RNF43-206ENST00000582293 RPS12P25398 132 aaKnown RBP20.27■□□□□ 0.84
RNF43-206ENST00000582293 OS9Q13438 667 aaPredicted RBP20.27■□□□□ 0.84
RNF43-206ENST00000582293 CCDC102BQ68D86 513 aa20.27■□□□□ 0.84
RNF43-206ENST00000582293 MICALL2Q8IY33 904 aa20.27■□□□□ 0.84
RNF43-206ENST00000582293 AGBL3Q8NEM8 1001 aa20.27■□□□□ 0.84
RNF43-206ENST00000582293 RHPN1Q8TCX5 695 aa20.27■□□□□ 0.84
RNF43-206ENST00000582293 EAF2Q96CJ1 260 aaPredicted RBP20.27■□□□□ 0.84
RNF43-206ENST00000582293 CNOT7Q9UIV1 285 aaKnown RBP20.27■□□□□ 0.84
RNF43-206ENST00000582293 FBXW7Q969H0 707 aa20.26■□□□□ 0.83
RNF43-206ENST00000582293 TLR7Q9NYK1 1049 aaKnown RBP20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 111.6 ms