RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 RIPOR2Q9Y4F9 1068 aa27.11■■□□□ 1.93
CCDC47-204ENST00000582252 U3KPZ7 1027 aaPredicted RBP27.11■■□□□ 1.93
CCDC47-204ENST00000582252 RIC1Q4ADV7 1423 aa27.11■■□□□ 1.93
CCDC47-204ENST00000582252 BAG4O95429 457 aaKnown RBP27.1■■□□□ 1.93
CCDC47-204ENST00000582252 KRT32Q14532 448 aa27.1■■□□□ 1.93
CCDC47-204ENST00000582252 ZNF589Q86UQ0 364 aaPredicted RBP27.1■■□□□ 1.93
CCDC47-204ENST00000582252 SYNE4Q8N205 404 aa27.1■■□□□ 1.93
CCDC47-204ENST00000582252 XAGE2Q96GT9 111 aa27.1■■□□□ 1.93
CCDC47-204ENST00000582252 NYXQ9GZU5 481 aa27.1■■□□□ 1.93
CCDC47-204ENST00000582252 RPAP1Q9BWH6 1393 aaPredicted RBP27.1■■□□□ 1.93
CCDC47-204ENST00000582252 FAM177BA6PVY3 158 aa27.1■■□□□ 1.93
CCDC47-204ENST00000582252 TSGA10IPQ3SY00 556 aa27.1■■□□□ 1.93
CCDC47-204ENST00000582252 BICDL1Q6ZP65 573 aa27.1■■□□□ 1.93
CCDC47-204ENST00000582252 LRP5O75197 1615 aa27.09■■□□□ 1.93
CCDC47-204ENST00000582252 GYS1P13807 737 aa27.09■■□□□ 1.93
CCDC47-204ENST00000582252 ATP2B3Q16720 1220 aa27.09■■□□□ 1.93
CCDC47-204ENST00000582252 DEFB132Q7Z7B7 95 aa27.09■■□□□ 1.93
CCDC47-204ENST00000582252 SH2B1Q9NRF2 756 aaPredicted RBP27.09■■□□□ 1.93
CCDC47-204ENST00000582252 ZSCAN21Q9Y5A6 473 aaPredicted RBP27.09■■□□□ 1.93
CCDC47-204ENST00000582252 NDUFB9Q9Y6M9 179 aa27.09■■□□□ 1.93
CCDC47-204ENST00000582252 CASZ1Q86V15 1759 aa27.09■■□□□ 1.93
CCDC47-204ENST00000582252 CARMIL3Q8ND23 1372 aa27.09■■□□□ 1.93
CCDC47-204ENST00000582252 STK32BQ9NY57 414 aa27.07■■□□□ 1.92
CCDC47-204ENST00000582252 ANKRD1Q15327 319 aa27.07■■□□□ 1.92
CCDC47-204ENST00000582252 ADCK5Q3MIX3 580 aa27.07■■□□□ 1.92
CCDC47-204ENST00000582252 ZFYP08048 801 aaPredicted RBP27.06■■□□□ 1.92
CCDC47-204ENST00000582252 SLC15A2Q16348 729 aa27.06■■□□□ 1.92
CCDC47-204ENST00000582252 BLOC1S2Q6QNY1 142 aa27.06■■□□□ 1.92
CCDC47-204ENST00000582252 MROH5Q6ZUA9 1318 aa27.06■■□□□ 1.92
CCDC47-204ENST00000582252 RNF113AO15541 343 aaKnown RBP27.05■■□□□ 1.92
CCDC47-204ENST00000582252 NFIXQ14938 502 aa27.05■■□□□ 1.92
CCDC47-204ENST00000582252 ZMYM1Q5SVZ6 1142 aa27.05■■□□□ 1.92
CCDC47-204ENST00000582252 NBPF5PQ86XG9 351 aaPredicted RBP27.05■■□□□ 1.92
CCDC47-204ENST00000582252 COL23A1Q86Y22 540 aaPredicted RBP27.05■■□□□ 1.92
CCDC47-204ENST00000582252 ALDH8A1Q9H2A2 487 aaPredicted RBP27.05■■□□□ 1.92
CCDC47-204ENST00000582252 ANO8Q9HCE9 1232 aaPredicted RBP27.05■■□□□ 1.92
CCDC47-204ENST00000582252 PNPLA7Q6ZV29 1317 aa27.05■■□□□ 1.92
CCDC47-204ENST00000582252 GTF2E1P29083 439 aaPredicted RBP27.04■■□□□ 1.92
CCDC47-204ENST00000582252 TPTE2Q6XPS3 522 aa27.04■■□□□ 1.92
CCDC47-204ENST00000582252 ZNF512BQ96KM6 892 aaPredicted RBP27.04■■□□□ 1.92
CCDC47-204ENST00000582252 DSCC1Q9BVC3 393 aa27.04■■□□□ 1.92
CCDC47-204ENST00000582252 ARAP2Q8WZ64 1704 aa27.04■■□□□ 1.92
CCDC47-204ENST00000582252 RTL9Q8NET4 1388 aa27.03■■□□□ 1.92
CCDC47-204ENST00000582252 HCLS1P14317 486 aaPredicted RBP27.03■■□□□ 1.92
CCDC47-204ENST00000582252 ADORA1P30542 326 aa27.03■■□□□ 1.92
CCDC47-204ENST00000582252 CCDC152Q4G0S7 254 aa27.03■■□□□ 1.92
CCDC47-204ENST00000582252 MYH7P12883 1935 aa27.03■■□□□ 1.92
CCDC47-204ENST00000582252 PDE8BO95263 885 aa27.02■■□□□ 1.92
CCDC47-204ENST00000582252 FKBP4Q02790 459 aaKnown RBP eCLIP27.02■■□□□ 1.92
CCDC47-204ENST00000582252 PKP1Q13835 747 aa27.02■■□□□ 1.92
CCDC47-204ENST00000582252 BRD1O95696 1058 aa27.02■■□□□ 1.92
CCDC47-204ENST00000582252 ERFEQ4G0M1 354 aa27.02■■□□□ 1.92
CCDC47-204ENST00000582252 VGLL2Q8N8G2 317 aa27.02■■□□□ 1.92
CCDC47-204ENST00000582252 RPS6KB1P23443 525 aa27.01■■□□□ 1.91
CCDC47-204ENST00000582252 SLC10A5Q5PT55 438 aa27.01■■□□□ 1.91
CCDC47-204ENST00000582252 NLGN1Q8N2Q7 840 aa27.01■■□□□ 1.91
CCDC47-204ENST00000582252 ZDHHC9Q9Y397 364 aa27.01■■□□□ 1.91
CCDC47-204ENST00000582252 WDR33Q9C0J8 1336 aaKnown RBP27.01■■□□□ 1.91
CCDC47-204ENST00000582252 CPA1P15085 419 aa27■■□□□ 1.91
CCDC47-204ENST00000582252 CCDC129Q6ZRS4 1044 aa27■■□□□ 1.91
CCDC47-204ENST00000582252 SEC62Q99442 399 aaKnown RBP27■■□□□ 1.91
CCDC47-204ENST00000582252 TM4SF1P30408 202 aa26.99■■□□□ 1.91
CCDC47-204ENST00000582252 TTF1Q15361 905 aaPredicted RBP26.99■■□□□ 1.91
CCDC47-204ENST00000582252 PUM3Q15397 648 aaKnown RBP26.99■■□□□ 1.91
CCDC47-204ENST00000582252 L1TD1Q5T7N2 865 aaKnown RBP26.99■■□□□ 1.91
CCDC47-204ENST00000582252 MCTP1Q6DN14 999 aa26.99■■□□□ 1.91
CCDC47-204ENST00000582252 ZSCAN25Q6NSZ9 544 aa26.99■■□□□ 1.91
CCDC47-204ENST00000582252 MPHOSPH8Q99549 860 aa26.99■■□□□ 1.91
CCDC47-204ENST00000582252 SMC3Q9UQE7 1217 aa26.99■■□□□ 1.91
CCDC47-204ENST00000582252 NPHP1O15259 732 aa26.99■■□□□ 1.91
CCDC47-204ENST00000582252 UQCRFS1P1P0C7P4 283 aa26.99■■□□□ 1.91
CCDC47-204ENST00000582252 LPIN2Q92539 896 aa26.99■■□□□ 1.91
CCDC47-204ENST00000582252 DDX24Q9GZR7 859 aaKnown RBP eCLIP26.99■■□□□ 1.913e-6■□□□□ 8.5
CCDC47-204ENST00000582252 CNBD1Q8NA66 436 aa26.98■■□□□ 1.91
CCDC47-204ENST00000582252 HMGB1P09429 215 aaKnown RBP26.97■■□□□ 1.91
CCDC47-204ENST00000582252 IGHMBP2P38935 993 aaKnown RBP26.97■■□□□ 1.91
CCDC47-204ENST00000582252 NEK1Q96PY6 1258 aa26.97■■□□□ 1.91
CCDC47-204ENST00000582252 PDIA4P13667 645 aaKnown RBP26.96■■□□□ 1.91
CCDC47-204ENST00000582252 SLC5A1P13866 664 aa26.96■■□□□ 1.91
CCDC47-204ENST00000582252 MAST3O60307 1309 aa26.96■■□□□ 1.91
CCDC47-204ENST00000582252 AKAP11Q9UKA4 1901 aa26.96■■□□□ 1.91
CCDC47-204ENST00000582252 ZAP70P43403 619 aa26.96■■□□□ 1.91
CCDC47-204ENST00000582252 NRXN2Q9P2S2 1712 aa26.96■■□□□ 1.91
CCDC47-204ENST00000582252 SF3B3Q15393 1217 aaKnown RBP26.95■■□□□ 1.9
CCDC47-204ENST00000582252 KLHL40Q2TBA0 621 aa26.95■■□□□ 1.9
CCDC47-204ENST00000582252 ISY1Q9ULR0 285 aaKnown RBP26.95■■□□□ 1.9
CCDC47-204ENST00000582252 SERPINB2P05120 415 aa26.94■■□□□ 1.9
CCDC47-204ENST00000582252 APPBP2Q92624 585 aa26.94■■□□□ 1.9
CCDC47-204ENST00000582252 NLRP3Q96P20 1036 aa26.94■■□□□ 1.9
CCDC47-204ENST00000582252 GZF1Q9H116 711 aaPredicted RBP26.94■■□□□ 1.9
CCDC47-204ENST00000582252 ARID4AP29374 1257 aaPredicted RBP26.93■■□□□ 1.9
CCDC47-204ENST00000582252 DDR1Q08345 913 aa26.93■■□□□ 1.9
CCDC47-204ENST00000582252 CCDC83Q8IWF9 413 aa26.93■■□□□ 1.9
CCDC47-204ENST00000582252 DDX49Q9Y6V7 483 aaKnown RBP26.93■■□□□ 1.9
CCDC47-204ENST00000582252 TNRC6CQ9HCJ0 1690 aaKnown RBP26.93■■□□□ 1.9
CCDC47-204ENST00000582252 POLRMTO00411 1230 aaKnown RBP26.93■■□□□ 1.9
CCDC47-204ENST00000582252 CHGBP05060 677 aa26.93■■□□□ 1.9
CCDC47-204ENST00000582252 CYP21A2P08686 494 aa26.93■■□□□ 1.9
CCDC47-204ENST00000582252 HSPD1P10809 573 aaKnown RBP26.93■■□□□ 1.9
CCDC47-204ENST00000582252 FGFR2P21802 821 aa26.93■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms