RNA–Protein interactions for RNA: ENST00000580997.1

SENP3-204, Transcript of SUMO specific peptidase 3, humanhuman

TSL 2

Gene SENP3, Length 679 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-204ENST00000580997 FAM161AQ3B820 660 aa15.87■□□□□ 0.13
SENP3-204ENST00000580997 USP17L1Q7RTZ2 530 aa15.87■□□□□ 0.13
SENP3-204ENST00000580997 CAPNS2Q96L46 248 aa15.87■□□□□ 0.13
SENP3-204ENST00000580997 MYH3P11055 1940 aa15.87■□□□□ 0.13
SENP3-204ENST00000580997 TRPM7Q96QT4 1865 aa15.86■□□□□ 0.13
SENP3-204ENST00000580997 FXR2P51116 673 aaKnown RBP eCLIP15.86■□□□□ 0.13
SENP3-204ENST00000580997 CYP4F22Q6NT55 531 aa15.86■□□□□ 0.13
SENP3-204ENST00000580997 USP48Q86UV5 1035 aa15.86■□□□□ 0.13
SENP3-204ENST00000580997 REM2Q8IYK8 340 aaPredicted RBP15.86■□□□□ 0.13
SENP3-204ENST00000580997 ANKRD2Q9GZV1 360 aa15.86■□□□□ 0.13
SENP3-204ENST00000580997 PRDM10Q9NQV6 1147 aa15.86■□□□□ 0.13
SENP3-204ENST00000580997 MAP2K2P36507 400 aa15.85■□□□□ 0.13
SENP3-204ENST00000580997 CTCFP49711 727 aaPredicted RBP15.85■□□□□ 0.13
SENP3-204ENST00000580997 KIF4BQ2VIQ3 1234 aa15.85■□□□□ 0.13
SENP3-204ENST00000580997 TNS4Q8IZW8 715 aa15.85■□□□□ 0.13
SENP3-204ENST00000580997 AIDAQ96BJ3 306 aa15.85■□□□□ 0.13
SENP3-204ENST00000580997 DCPSQ96C86 337 aaKnown RBP15.85■□□□□ 0.13
SENP3-204ENST00000580997 MPHOSPH8Q99549 860 aa15.85■□□□□ 0.13
SENP3-204ENST00000580997 COA1Q9GZY4 146 aa15.85■□□□□ 0.13
SENP3-204ENST00000580997 ANKRD18BA2A2Z9 1011 aa15.84■□□□□ 0.13
SENP3-204ENST00000580997 GRM8O00222 908 aa15.84■□□□□ 0.13
SENP3-204ENST00000580997 ALDH1L1O75891 902 aa15.84■□□□□ 0.13
SENP3-204ENST00000580997 USP17L8P0C7I0 530 aa15.84■□□□□ 0.13
SENP3-204ENST00000580997 DACT2Q5SW24 774 aa15.84■□□□□ 0.13
SENP3-204ENST00000580997 RBM26Q5T8P6 1007 aaKnown RBP15.84■□□□□ 0.13
SENP3-204ENST00000580997 DLK2Q6UY11 383 aa15.84■□□□□ 0.13
SENP3-204ENST00000580997 KRT26Q7Z3Y9 468 aa15.84■□□□□ 0.13
SENP3-204ENST00000580997 TXNRD3Q86VQ6 643 aa15.84■□□□□ 0.13
SENP3-204ENST00000580997 ZNF804BA4D1E1 1349 aa15.84■□□□□ 0.13
SENP3-204ENST00000580997 CHRNDQ07001 517 aa15.83■□□□□ 0.12
SENP3-204ENST00000580997 IFIT5Q13325 482 aaKnown RBP15.83■□□□□ 0.12
SENP3-204ENST00000580997 STRIP1Q5VSL9 837 aa15.83■□□□□ 0.12
SENP3-204ENST00000580997 MYOZ2Q9NPC6 264 aa15.83■□□□□ 0.12
SENP3-204ENST00000580997 THSD7BQ9C0I4 1608 aa15.83■□□□□ 0.12
SENP3-204ENST00000580997 PSME4Q14997 1843 aa15.82■□□□□ 0.12
SENP3-204ENST00000580997 E9PSI1 815 aa15.82■□□□□ 0.12
SENP3-204ENST00000580997 MMP14P50281 582 aa15.82■□□□□ 0.12
SENP3-204ENST00000580997 SCARF1Q14162 830 aa15.82■□□□□ 0.12
SENP3-204ENST00000580997 POLA2Q14181 598 aa15.82■□□□□ 0.12
SENP3-204ENST00000580997 EPHA10Q5JZY3 1008 aa15.82■□□□□ 0.12
SENP3-204ENST00000580997 LMBR1LQ6UX01 489 aa15.82■□□□□ 0.12
SENP3-204ENST00000580997 C15orf52Q6ZUT6 534 aaKnown RBP15.82■□□□□ 0.12
SENP3-204ENST00000580997 ZNF408Q9H9D4 720 aa15.82■□□□□ 0.12
SENP3-204ENST00000580997 IRS2Q9Y4H2 1338 aa15.82■□□□□ 0.12
SENP3-204ENST00000580997 ADM5C9JUS6 153 aa15.81■□□□□ 0.12
SENP3-204ENST00000580997 ASTN2O75129 1339 aaPredicted RBP15.81■□□□□ 0.12
SENP3-204ENST00000580997 PAXIP1Q6ZW49 1069 aaPredicted RBP15.81■□□□□ 0.12
SENP3-204ENST00000580997 MRPL50Q8N5N7 158 aaKnown RBP15.81■□□□□ 0.12
SENP3-204ENST00000580997 MYO3BQ8WXR4 1341 aa15.81■□□□□ 0.12
SENP3-204ENST00000580997 SRCIN1Q9C0H9 1055 aa15.81■□□□□ 0.12
SENP3-204ENST00000580997 GGA3Q9NZ52 723 aa15.81■□□□□ 0.12
SENP3-204ENST00000580997 C9orf78Q9NZ63 289 aaPredicted RBP15.81■□□□□ 0.12
SENP3-204ENST00000580997 UTYO14607 1347 aa15.8■□□□□ 0.12
SENP3-204ENST00000580997 PITPNM2Q9BZ72 1349 aa15.8■□□□□ 0.12
SENP3-204ENST00000580997 KLRK1P26718 216 aa15.8■□□□□ 0.12
SENP3-204ENST00000580997 LBX1P52954 281 aa15.8■□□□□ 0.12
SENP3-204ENST00000580997 SLFN5Q08AF3 891 aa15.8■□□□□ 0.12
SENP3-204ENST00000580997 CCDC57Q2TAC2 916 aa15.8■□□□□ 0.12
SENP3-204ENST00000580997 ANGEL2Q5VTE6 544 aaKnown RBP15.8■□□□□ 0.12
SENP3-204ENST00000580997 SULF1Q8IWU6 871 aa15.8■□□□□ 0.12
SENP3-204ENST00000580997 KAZALD1Q96I82 304 aa15.8■□□□□ 0.12
SENP3-204ENST00000580997 SPEF2Q9C093 1822 aa15.8■□□□□ 0.12
SENP3-204ENST00000580997 AOC2O75106 756 aa15.79■□□□□ 0.12
SENP3-204ENST00000580997 HSPA8P11142 646 aaKnown RBP15.79■□□□□ 0.12
SENP3-204ENST00000580997 HUNKP57058 714 aa15.79■□□□□ 0.12
SENP3-204ENST00000580997 GRM1Q13255 1194 aa15.79■□□□□ 0.12
SENP3-204ENST00000580997 TTLL5Q6EMB2 1281 aa15.79■□□□□ 0.12
SENP3-204ENST00000580997 SLC4A10Q6U841 1118 aa15.79■□□□□ 0.12
SENP3-204ENST00000580997 MXD3Q9BW11 206 aa15.79■□□□□ 0.12
SENP3-204ENST00000580997 GBA2Q9HCG7 927 aaPredicted RBP15.79■□□□□ 0.12
SENP3-204ENST00000580997 PTPRCP08575 1304 aa15.78■□□□□ 0.12
SENP3-204ENST00000580997 SNAP23O00161 211 aa15.78■□□□□ 0.12
SENP3-204ENST00000580997 TAF5LO75529 589 aa15.78■□□□□ 0.12
SENP3-204ENST00000580997 NBPF7P0C2Y1 421 aaPredicted RBP15.78■□□□□ 0.12
SENP3-204ENST00000580997 BRPF1P55201 1214 aaPredicted RBP15.78■□□□□ 0.12
SENP3-204ENST00000580997 LDHAL6AQ6ZMR3 332 aa15.78■□□□□ 0.12
SENP3-204ENST00000580997 TRMT2AQ8IZ69 625 aaKnown RBP15.78■□□□□ 0.12
SENP3-204ENST00000580997 OGFOD1Q8N543 542 aa15.78■□□□□ 0.12
SENP3-204ENST00000580997 C2orf69Q8N8R5 385 aa15.78■□□□□ 0.12
SENP3-204ENST00000580997 CD209Q9NNX6 404 aa15.78■□□□□ 0.12
SENP3-204ENST00000580997 CHMP3Q9Y3E7 222 aa15.78■□□□□ 0.12
SENP3-204ENST00000580997 KCNJ4P48050 445 aa15.77■□□□□ 0.12
SENP3-204ENST00000580997 NOGQ13253 232 aa15.77■□□□□ 0.12
SENP3-204ENST00000580997 NBPF9Q3BBW0 867 aa15.77■□□□□ 0.12
SENP3-204ENST00000580997 RGMBQ6NW40 437 aa15.77■□□□□ 0.12
SENP3-204ENST00000580997 HELBQ8NG08 1087 aaPredicted RBP15.77■□□□□ 0.12
SENP3-204ENST00000580997 SSH1Q8WYL5 1049 aa15.77■□□□□ 0.12
SENP3-204ENST00000580997 CDCA5Q96FF9 252 aa15.77■□□□□ 0.12
SENP3-204ENST00000580997 ZNF594Q96JF6 807 aaPredicted RBP15.77■□□□□ 0.12
SENP3-204ENST00000580997 BEGAINQ9BUH8 593 aa15.77■□□□□ 0.12
SENP3-204ENST00000580997 ZNF646O15015 1829 aaPredicted RBP15.77■□□□□ 0.11
SENP3-204ENST00000580997 POLR2AP24928 1970 aaKnown RBP15.76■□□□□ 0.11
SENP3-204ENST00000580997 FAM155AB1AL88 458 aaPredicted RBP15.76■□□□□ 0.11
SENP3-204ENST00000580997 CCER2I3L3R5 266 aa15.76■□□□□ 0.11
SENP3-204ENST00000580997 WNT10BO00744 389 aa15.76■□□□□ 0.11
SENP3-204ENST00000580997 CA12O43570 354 aa15.76■□□□□ 0.11
SENP3-204ENST00000580997 IL1R1P14778 569 aa15.76■□□□□ 0.11
SENP3-204ENST00000580997 GTF2IP78347 998 aa15.76■□□□□ 0.11
SENP3-204ENST00000580997 RABL6Q3YEC7 729 aaPredicted RBP15.76■□□□□ 0.11
SENP3-204ENST00000580997 SUCLG2Q96I99 432 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms