RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 GRAPLQ8TC17 118 aaPredicted RBP10.29□□□□□ -0.76
SMARCE1-217ENST00000580654 MIS18AQ9NYP9 233 aa10.29□□□□□ -0.76
SMARCE1-217ENST00000580654 POLLQ9UGP5 575 aa10.29□□□□□ -0.76
SMARCE1-217ENST00000580654 PCDHB8Q9UN66 801 aa10.29□□□□□ -0.76
SMARCE1-217ENST00000580654 H0YGN5 161 aa10.28□□□□□ -0.76
SMARCE1-217ENST00000580654 VIL1P09327 827 aaKnown RBP10.28□□□□□ -0.76
SMARCE1-217ENST00000580654 HSPA5P11021 654 aaKnown RBP10.28□□□□□ -0.76
SMARCE1-217ENST00000580654 HCLS1P14317 486 aaPredicted RBP10.28□□□□□ -0.76
SMARCE1-217ENST00000580654 MYL6BP14649 208 aa10.28□□□□□ -0.76
SMARCE1-217ENST00000580654 ZNF280AP59817 542 aaPredicted RBP10.28□□□□□ -0.76
SMARCE1-217ENST00000580654 CAP1Q01518 475 aa10.28□□□□□ -0.76
SMARCE1-217ENST00000580654 PARP10Q53GL7 1025 aa10.28□□□□□ -0.76
SMARCE1-217ENST00000580654 PRAMEF18Q5VWM3 479 aa10.28□□□□□ -0.76
SMARCE1-217ENST00000580654 ARMC5Q96C12 935 aa10.28□□□□□ -0.76
SMARCE1-217ENST00000580654 UTP14AQ9BVJ6 771 aaKnown RBP10.28□□□□□ -0.76
SMARCE1-217ENST00000580654 PTPN22Q9Y2R2 807 aa10.28□□□□□ -0.76
SMARCE1-217ENST00000580654 PITPNM2Q9BZ72 1349 aa10.28□□□□□ -0.76
SMARCE1-217ENST00000580654 ZNF646O15015 1829 aaPredicted RBP10.28□□□□□ -0.76
SMARCE1-217ENST00000580654 DLG5Q8TDM6 1919 aa10.27□□□□□ -0.76
SMARCE1-217ENST00000580654 ZNF609O15014 1411 aa10.27□□□□□ -0.77
SMARCE1-217ENST00000580654 LRP10Q7Z4F1 713 aa10.27□□□□□ -0.77
SMARCE1-217ENST00000580654 PER1O15534 1290 aaPredicted RBP10.26□□□□□ -0.77
SMARCE1-217ENST00000580654 GPSM2P81274 684 aa10.26□□□□□ -0.77
SMARCE1-217ENST00000580654 SREBF2Q12772 1141 aa10.26□□□□□ -0.77
SMARCE1-217ENST00000580654 DDX46Q7L014 1031 aaKnown RBP10.26□□□□□ -0.77
SMARCE1-217ENST00000580654 NSFL1CQ9UNZ2 370 aaKnown RBP10.26□□□□□ -0.77
SMARCE1-217ENST00000580654 EIF4A1P60842 406 aaKnown RBP10.25□□□□□ -0.77
SMARCE1-217ENST00000580654 PTPN12Q05209 780 aaKnown RBP10.25□□□□□ -0.77
SMARCE1-217ENST00000580654 TAF7Q15545 349 aaPredicted RBP10.25□□□□□ -0.77
SMARCE1-217ENST00000580654 CC2D1BQ5T0F9 858 aaKnown RBP10.25□□□□□ -0.77
SMARCE1-217ENST00000580654 TMC4Q7Z404 712 aa10.25□□□□□ -0.77
SMARCE1-217ENST00000580654 RTF1Q92541 710 aaKnown RBP10.25□□□□□ -0.77
SMARCE1-217ENST00000580654 CELF1Q92879 486 aaKnown RBP10.25□□□□□ -0.77
SMARCE1-217ENST00000580654 GMLQ99445 158 aa10.25□□□□□ -0.77
SMARCE1-217ENST00000580654 THUMPD2Q9BTF0 503 aaKnown RBP10.25□□□□□ -0.77
SMARCE1-217ENST00000580654 RBM27Q9P2N5 1060 aaKnown RBP10.25□□□□□ -0.77
SMARCE1-217ENST00000580654 UNC80Q8N2C7 3258 aa10.25□□□□□ -0.77
SMARCE1-217ENST00000580654 C6orf229H3BNL8 230 aa10.24□□□□□ -0.77
SMARCE1-217ENST00000580654 DCAF8Q5TAQ9 597 aa10.24□□□□□ -0.77
SMARCE1-217ENST00000580654 NLRP10Q86W26 655 aa10.24□□□□□ -0.77
SMARCE1-217ENST00000580654 TBC1D16Q8TBP0 767 aa10.24□□□□□ -0.77
SMARCE1-217ENST00000580654 CD99L2Q8TCZ2 262 aa10.24□□□□□ -0.77
SMARCE1-217ENST00000580654 IGF2BP3O00425 579 aaKnown RBP eCLIP10.23□□□□□ -0.77
SMARCE1-217ENST00000580654 EIF4G2P78344 907 aaKnown RBP eCLIP10.23□□□□□ -0.77
SMARCE1-217ENST00000580654 GOLGA2Q08379 1002 aa10.23□□□□□ -0.77
SMARCE1-217ENST00000580654 PDIA6Q15084 440 aa10.23□□□□□ -0.77
SMARCE1-217ENST00000580654 SPRYD7Q5W111 196 aa10.23□□□□□ -0.77
SMARCE1-217ENST00000580654 RSBN1LQ6PCB5 846 aaPredicted RBP10.23□□□□□ -0.77
SMARCE1-217ENST00000580654 AGBL3Q8NEM8 1001 aa10.23□□□□□ -0.77
SMARCE1-217ENST00000580654 RNF166Q96A37 237 aaPredicted RBP10.23□□□□□ -0.77
SMARCE1-217ENST00000580654 ZNF333Q96JL9 665 aa10.23□□□□□ -0.77
SMARCE1-217ENST00000580654 PRO3102Q9H379 93 aa10.23□□□□□ -0.77
SMARCE1-217ENST00000580654 MYOZ2Q9NPC6 264 aa10.23□□□□□ -0.77
SMARCE1-217ENST00000580654 HTATSF1O43719 755 aaKnown RBP10.22□□□□□ -0.77
SMARCE1-217ENST00000580654 ALDH1A1P00352 501 aa10.22□□□□□ -0.77
SMARCE1-217ENST00000580654 TTLL12Q14166 644 aaPredicted RBP10.22□□□□□ -0.77
SMARCE1-217ENST00000580654 PROSER3Q2NL68 480 aa10.22□□□□□ -0.77
SMARCE1-217ENST00000580654 NBPF9Q3BBW0 867 aa10.22□□□□□ -0.77
SMARCE1-217ENST00000580654 LDLRAD1Q5T700 205 aa10.22□□□□□ -0.77
SMARCE1-217ENST00000580654 ZNF428Q96B54 188 aa10.22□□□□□ -0.77
SMARCE1-217ENST00000580654 EYA3Q99504 573 aa10.22□□□□□ -0.77
SMARCE1-217ENST00000580654 ERBB4Q15303 1308 aa10.22□□□□□ -0.77
SMARCE1-217ENST00000580654 ZSWIM8A7E2V4 1837 aa10.21□□□□□ -0.77
SMARCE1-217ENST00000580654 LAMA3Q16787 3333 aa10.21□□□□□ -0.77
SMARCE1-217ENST00000580654 ANXA1P04083 346 aa10.21□□□□□ -0.77
SMARCE1-217ENST00000580654 USP17L8P0C7I0 530 aa10.21□□□□□ -0.77
SMARCE1-217ENST00000580654 ERO1AQ96HE7 468 aa10.21□□□□□ -0.77
SMARCE1-217ENST00000580654 EFCC1Q9HA90 598 aa10.21□□□□□ -0.77
SMARCE1-217ENST00000580654 RTN4Q9NQC3 1192 aaKnown RBP10.21□□□□□ -0.77
SMARCE1-217ENST00000580654 TRMT112Q9UI30 125 aaKnown RBP10.21□□□□□ -0.77
SMARCE1-217ENST00000580654 FZD1Q9UP38 647 aa10.21□□□□□ -0.77
SMARCE1-217ENST00000580654 SH3TC1Q8TE82 1336 aa10.21□□□□□ -0.78
SMARCE1-217ENST00000580654 CRHR2Q13324 411 aa10.2□□□□□ -0.78
SMARCE1-217ENST00000580654 TCIRG1Q13488 830 aa10.2□□□□□ -0.78
SMARCE1-217ENST00000580654 PRKG1Q13976 671 aa10.2□□□□□ -0.78
SMARCE1-217ENST00000580654 SF3B3Q15393 1217 aaKnown RBP10.2□□□□□ -0.78
SMARCE1-217ENST00000580654 ZC3H12CQ9C0D7 883 aaKnown RBP10.2□□□□□ -0.78
SMARCE1-217ENST00000580654 MANSC4A6NHS7 340 aaPredicted RBP10.19□□□□□ -0.78
SMARCE1-217ENST00000580654 SOX1O00570 391 aaPredicted RBP10.19□□□□□ -0.78
SMARCE1-217ENST00000580654 NECTIN2Q92692 538 aa10.19□□□□□ -0.78
SMARCE1-217ENST00000580654 PODXL2Q9NZ53 605 aa10.19□□□□□ -0.78
SMARCE1-217ENST00000580654 TIMELESSQ9UNS1 1208 aa10.19□□□□□ -0.78
SMARCE1-217ENST00000580654 PTCH2Q9Y6C5 1203 aa10.19□□□□□ -0.78
SMARCE1-217ENST00000580654 SSC5DA1L4H1 1573 aa10.18□□□□□ -0.78
SMARCE1-217ENST00000580654 WTIPA6NIX2 430 aaPredicted RBP10.18□□□□□ -0.78
SMARCE1-217ENST00000580654 WNT10BO00744 389 aa10.18□□□□□ -0.78
SMARCE1-217ENST00000580654 HOXB3P14651 431 aaPredicted RBP10.18□□□□□ -0.78
SMARCE1-217ENST00000580654 INHBEP58166 350 aa10.18□□□□□ -0.78
SMARCE1-217ENST00000580654 ARMC9Q7Z3E5 817 aa10.18□□□□□ -0.78
SMARCE1-217ENST00000580654 ZNF467Q7Z7K2 595 aaPredicted RBP10.18□□□□□ -0.78
SMARCE1-217ENST00000580654 PNISRQ8TF01 805 aaKnown RBP10.18□□□□□ -0.78
SMARCE1-217ENST00000580654 WNK4Q96J92 1243 aa10.18□□□□□ -0.78
SMARCE1-217ENST00000580654 CLMNQ96JQ2 1002 aa10.18□□□□□ -0.78
SMARCE1-217ENST00000580654 MXD3Q9BW11 206 aa10.18□□□□□ -0.78
SMARCE1-217ENST00000580654 ANGEL1Q9UNK9 670 aaKnown RBP10.18□□□□□ -0.78
SMARCE1-217ENST00000580654 UFL1O94874 794 aa10.17□□□□□ -0.78
SMARCE1-217ENST00000580654 MYCP01106 439 aaPredicted RBP10.17□□□□□ -0.78
SMARCE1-217ENST00000580654 U2AF1L5P0DN76 240 aaPredicted RBP10.17□□□□□ -0.78
SMARCE1-217ENST00000580654 HOXB1P14653 301 aaPredicted RBP10.17□□□□□ -0.78
SMARCE1-217ENST00000580654 NF2P35240 595 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms