RNA–Protein interactions for RNA: ENST00000580498.5

SMG8-204, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 5

Gene SMG8, Length 785 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-204ENST00000580498 SCN9AQ15858 1988 aa25.29■■□□□ 1.64
SMG8-204ENST00000580498 ECE1P42892 770 aa25.29■■□□□ 1.64
SMG8-204ENST00000580498 ZNF804AQ7Z570 1209 aa25.29■■□□□ 1.64
SMG8-204ENST00000580498 NBPF7P0C2Y1 421 aaPredicted RBP25.28■■□□□ 1.64
SMG8-204ENST00000580498 EPHA10Q5JZY3 1008 aa25.28■■□□□ 1.64
SMG8-204ENST00000580498 STRIP1Q5VSL9 837 aa25.28■■□□□ 1.64
SMG8-204ENST00000580498 MIER1Q8N108 512 aa25.28■■□□□ 1.64
SMG8-204ENST00000580498 GLIS2Q9BZE0 524 aaPredicted RBP25.28■■□□□ 1.64
SMG8-204ENST00000580498 HDAC9Q9UKV0 1011 aa25.28■■□□□ 1.64
SMG8-204ENST00000580498 RASSF10A6NK89 507 aa25.27■■□□□ 1.64
SMG8-204ENST00000580498 PLIN1O60240 522 aa25.27■■□□□ 1.64
SMG8-204ENST00000580498 CELF2O95319 508 aaKnown RBP25.27■■□□□ 1.64
SMG8-204ENST00000580498 HIRAP54198 1017 aaPredicted RBP25.27■■□□□ 1.64
SMG8-204ENST00000580498 KRT26Q7Z3Y9 468 aa25.27■■□□□ 1.64
SMG8-204ENST00000580498 SULF1Q8IWU6 871 aa25.27■■□□□ 1.64
SMG8-204ENST00000580498 ZNF408Q9H9D4 720 aa25.27■■□□□ 1.64
SMG8-204ENST00000580498 SHTN1A0MZ66 631 aa25.26■■□□□ 1.63
SMG8-204ENST00000580498 TRAF5O00463 557 aa25.26■■□□□ 1.63
SMG8-204ENST00000580498 HNRNPUQ00839 825 aaKnown RBP eCLIP25.26■■□□□ 1.63
SMG8-204ENST00000580498 TTLL5Q6EMB2 1281 aa25.26■■□□□ 1.63
SMG8-204ENST00000580498 AIDAQ96BJ3 306 aa25.26■■□□□ 1.63
SMG8-204ENST00000580498 BICC1Q9H694 974 aaKnown RBP25.26■■□□□ 1.63
SMG8-204ENST00000580498 IPO8O15397 1037 aaKnown RBP25.25■■□□□ 1.63
SMG8-204ENST00000580498 TAF5LO75529 589 aa25.25■■□□□ 1.63
SMG8-204ENST00000580498 BRPF1P55201 1214 aaPredicted RBP25.25■■□□□ 1.63
SMG8-204ENST00000580498 ZNF280AP59817 542 aaPredicted RBP25.25■■□□□ 1.63
SMG8-204ENST00000580498 HELBQ8NG08 1087 aaPredicted RBP25.25■■□□□ 1.63
SMG8-204ENST00000580498 ZNF594Q96JF6 807 aaPredicted RBP25.25■■□□□ 1.63
SMG8-204ENST00000580498 NOB1Q9ULX3 412 aaKnown RBP25.25■■□□□ 1.63
SMG8-204ENST00000580498 MROH5Q6ZUA9 1318 aa25.25■■□□□ 1.63
SMG8-204ENST00000580498 C15orf52Q6ZUT6 534 aaKnown RBP25.24■■□□□ 1.63
SMG8-204ENST00000580498 USP48Q86UV5 1035 aa25.24■■□□□ 1.63
SMG8-204ENST00000580498 MYOZ2Q9NPC6 264 aa25.24■■□□□ 1.63
SMG8-204ENST00000580498 UBTFL1P0CB47 393 aaPredicted RBP25.23■■□□□ 1.63
SMG8-204ENST00000580498 HSPA1AP0DMV8 641 aaKnown RBP25.23■■□□□ 1.63
SMG8-204ENST00000580498 HSPA1BP0DMV9 641 aaKnown RBP25.23■■□□□ 1.63
SMG8-204ENST00000580498 RABL6Q3YEC7 729 aaPredicted RBP25.23■■□□□ 1.63
SMG8-204ENST00000580498 CD209Q9NNX6 404 aa25.23■■□□□ 1.63
SMG8-204ENST00000580498 VEGFBP49765 207 aa25.22■■□□□ 1.63
SMG8-204ENST00000580498 UBE4AQ14139 1066 aa25.22■■□□□ 1.63
SMG8-204ENST00000580498 DACT2Q5SW24 774 aa25.22■■□□□ 1.63
SMG8-204ENST00000580498 USP44Q9H0E7 712 aa25.22■■□□□ 1.63
SMG8-204ENST00000580498 GGA3Q9NZ52 723 aa25.22■■□□□ 1.63
SMG8-204ENST00000580498 TLL2Q9Y6L7 1015 aa25.22■■□□□ 1.63
SMG8-204ENST00000580498 WTIPA6NIX2 430 aaPredicted RBP25.21■■□□□ 1.63
SMG8-204ENST00000580498 RARSP54136 660 aaKnown RBP25.21■■□□□ 1.63
SMG8-204ENST00000580498 GTF2IP78347 998 aa25.21■■□□□ 1.63
SMG8-204ENST00000580498 TXNRD3Q86VQ6 643 aa25.21■■□□□ 1.63
SMG8-204ENST00000580498 ARHGAP45Q92619 1136 aa25.21■■□□□ 1.63
SMG8-204ENST00000580498 GMLQ99445 158 aa25.21■■□□□ 1.63
SMG8-204ENST00000580498 WDR33Q9C0J8 1336 aaKnown RBP25.2■■□□□ 1.62
SMG8-204ENST00000580498 SCARF1Q14162 830 aa25.2■■□□□ 1.62
SMG8-204ENST00000580498 METTL24Q5JXM2 366 aa25.2■■□□□ 1.62
SMG8-204ENST00000580498 CST9Q5W186 159 aa25.2■■□□□ 1.62
SMG8-204ENST00000580498 VPS37DQ86XT2 251 aa25.2■■□□□ 1.62
SMG8-204ENST00000580498 C2orf69Q8N8R5 385 aa25.2■■□□□ 1.62
SMG8-204ENST00000580498 BEGAINQ9BUH8 593 aa25.2■■□□□ 1.62
SMG8-204ENST00000580498 PITPNM2Q9BZ72 1349 aa25.19■■□□□ 1.62
SMG8-204ENST00000580498 A0A1B0GUL6 1792 aa25.19■■□□□ 1.62
SMG8-204ENST00000580498 KLRK1P26718 216 aa25.19■■□□□ 1.62
SMG8-204ENST00000580498 MAP2K1Q02750 393 aaPredicted RBP25.19■■□□□ 1.62
SMG8-204ENST00000580498 KAZALD1Q96I82 304 aa25.19■■□□□ 1.62
SMG8-204ENST00000580498 HHIPL1Q96JK4 782 aa25.19■■□□□ 1.62
SMG8-204ENST00000580498 FMR1Q06787 632 aaKnown RBP eCLIP25.18■■□□□ 1.629e-6■■■■□ 20.6
SMG8-204ENST00000580498 GRM1Q13255 1194 aa25.18■■□□□ 1.62
SMG8-204ENST00000580498 CAPNS2Q96L46 248 aa25.18■■□□□ 1.62
SMG8-204ENST00000580498 EGFRP00533 1210 aa25.17■■□□□ 1.62
SMG8-204ENST00000580498 CAVIN4Q5BKX8 364 aa25.17■■□□□ 1.62
SMG8-204ENST00000580498 ANGEL2Q5VTE6 544 aaKnown RBP25.17■■□□□ 1.62
SMG8-204ENST00000580498 ANKRD44Q8N8A2 993 aa25.17■■□□□ 1.62
SMG8-204ENST00000580498 POLR2AP24928 1970 aaKnown RBP25.16■■□□□ 1.62
SMG8-204ENST00000580498 IL1R1P14778 569 aa25.16■■□□□ 1.62
SMG8-204ENST00000580498 HIBADHP31937 336 aaKnown RBP25.16■■□□□ 1.62
SMG8-204ENST00000580498 SAPCD2Q86UD0 394 aa25.16■■□□□ 1.62
SMG8-204ENST00000580498 KIAA0825Q8IV33 1275 aa25.16■■□□□ 1.62
SMG8-204ENST00000580498 FRAT2O75474 233 aaPredicted RBP25.15■■□□□ 1.62
SMG8-204ENST00000580498 GNAI3P08754 354 aa25.15■■□□□ 1.62
SMG8-204ENST00000580498 FKBP1AP62942 108 aaKnown RBP25.15■■□□□ 1.62
SMG8-204ENST00000580498 GBA2Q9HCG7 927 aaPredicted RBP25.15■■□□□ 1.62
SMG8-204ENST00000580498 RIPOR2Q9Y4F9 1068 aa25.15■■□□□ 1.62
SMG8-204ENST00000580498 ADM5C9JUS6 153 aa25.14■■□□□ 1.62
SMG8-204ENST00000580498 SNAP23O00161 211 aa25.14■■□□□ 1.62
SMG8-204ENST00000580498 MYO1BO43795 1136 aa25.14■■□□□ 1.62
SMG8-204ENST00000580498 NF2P35240 595 aa25.14■■□□□ 1.62
SMG8-204ENST00000580498 FRAT1Q92837 279 aaPredicted RBP25.14■■□□□ 1.62
SMG8-204ENST00000580498 PUS3Q9BZE2 481 aaKnown RBP25.14■■□□□ 1.62
SMG8-204ENST00000580498 HUNKP57058 714 aa25.13■■□□□ 1.61
SMG8-204ENST00000580498 CYP4F22Q6NT55 531 aa25.13■■□□□ 1.61
SMG8-204ENST00000580498 MXD3Q9BW11 206 aa25.13■■□□□ 1.61
SMG8-204ENST00000580498 FBXO3Q9UK99 471 aa25.13■■□□□ 1.61
SMG8-204ENST00000580498 SASH1O94885 1247 aa25.12■■□□□ 1.61
SMG8-204ENST00000580498 IFIT1P09914 478 aaKnown RBP25.12■■□□□ 1.61
SMG8-204ENST00000580498 MAP2K2P36507 400 aa25.12■■□□□ 1.61
SMG8-204ENST00000580498 DLGAP5Q15398 846 aa25.12■■□□□ 1.61
SMG8-204ENST00000580498 APOBEC3FQ8IUX4 373 aaKnown RBP25.12■■□□□ 1.61
SMG8-204ENST00000580498 PDE8BO95263 885 aa25.11■■□□□ 1.61
SMG8-204ENST00000580498 CTCFP49711 727 aaPredicted RBP25.11■■□□□ 1.61
SMG8-204ENST00000580498 PUM3Q15397 648 aaKnown RBP25.11■■□□□ 1.61
SMG8-204ENST00000580498 CDCA5Q96FF9 252 aa25.11■■□□□ 1.61
SMG8-204ENST00000580498 IRS2Q9Y4H2 1338 aa25.11■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms